Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212223578

Identifier: 212223578

GI number: 212223578

Start: 403938

End: 404609

Strand: Reverse

Name: 212223578

Synonym: TON_0432

Alternate gene names: NA

Gene position: 404609-403938 (Counterclockwise)

Preceding gene: 212223579

Following gene: 212223575

Centisome position: 21.9

GC content: 46.13

Gene sequence:

>672_bases
ATGAAAGCTCTGGAAGATTTTGTGAGGTCGTTCAAAATGGGAGAAACTGTAACCGTTGAGCTGTCATCATGTTCACCGCT
TCATCTTATTTTCTATAGTGCCCTTAAGTTCGCGCAGGAGAAGGGTACGAACGTTCTGATCCTAGATGGGTTTGACCGGC
TAGCAATCATTGTTCAAGACCTTAAGAGCGTCGGCATTGATGTCGATCTAGACAATCTTGATGTTATAAAAGGTGGGGGA
ACGCTAAGAACAGGAAACATAATAGCACACATTGATGTGTCCCACGACGAAAGGGTTTACATTAGAAAGTACAGGGATAC
GTTCCGCAGGTACCTCAGTTCTCATTCTAAAACTGTGTTGCTTGTCCTTGGGTTGGAAGAGTTCGTTATGAAGAGCAACG
CCGGAATTAGGGATGAGATGTTCTTTATGGACCTTCTCAGATCCTTTCTTAACGTCCCCCAGAGAATCGCGGTTTATTTC
ATCAACCCCAGCCTGATCAGCGAGCGTGCGCGGGCTCAGCTGGAAGAGCTCTCCACAAGGGTTATCTCAGTGGAGTGCTC
CAACGGCATATTGGTAAAAATCAAGAAGAGCATAAAACCCGAGGAACAGGGAGTCGAGATACTTGTACCCATGGACCATA
TTATCGAGTCAGAGCCCCATCAAGGATCTTGA

Upstream 100 bases:

>100_bases
AGTTTTACCTTCCAATTATCCTTGAGATCAAAGAGGGCGGAAAGAAAGCTGAGATCATTAAGCATCTTCGTCTGGAGTTC
GTTGGTTTGGAGGTGGTACC

Downstream 100 bases:

>100_bases
GCCTCTCTCTAACTTCATCGCTTAATAGGGATTCGAGCTCCTCCCTCGCTTTTTTTGAGAGTTCGAACTTCTCCAAGCCC
TTTGAAACACTTACCCAGCT

Product: protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKALEDFVRSFKMGETVTVELSSCSPLHLIFYSALKFAQEKGTNVLILDGFDRLAIIVQDLKSVGIDVDLDNLDVIKGGG
TLRTGNIIAHIDVSHDERVYIRKYRDTFRRYLSSHSKTVLLVLGLEEFVMKSNAGIRDEMFFMDLLRSFLNVPQRIAVYF
INPSLISERARAQLEELSTRVISVECSNGILVKIKKSIKPEEQGVEILVPMDHIIESEPHQGS

Sequences:

>Translated_223_residues
MKALEDFVRSFKMGETVTVELSSCSPLHLIFYSALKFAQEKGTNVLILDGFDRLAIIVQDLKSVGIDVDLDNLDVIKGGG
TLRTGNIIAHIDVSHDERVYIRKYRDTFRRYLSSHSKTVLLVLGLEEFVMKSNAGIRDEMFFMDLLRSFLNVPQRIAVYF
INPSLISERARAQLEELSTRVISVECSNGILVKIKKSIKPEEQGVEILVPMDHIIESEPHQGS
>Mature_223_residues
MKALEDFVRSFKMGETVTVELSSCSPLHLIFYSALKFAQEKGTNVLILDGFDRLAIIVQDLKSVGIDVDLDNLDVIKGGG
TLRTGNIIAHIDVSHDERVYIRKYRDTFRRYLSSHSKTVLLVLGLEEFVMKSNAGIRDEMFFMDLLRSFLNVPQRIAVYF
INPSLISERARAQLEELSTRVISVECSNGILVKIKKSIKPEEQGVEILVPMDHIIESEPHQGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25199; Mature: 25199

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALEDFVRSFKMGETVTVELSSCSPLHLIFYSALKFAQEKGTNVLILDGFDRLAIIVQD
CCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
LKSVGIDVDLDNLDVIKGGGTLRTGNIIAHIDVSHDERVYIRKYRDTFRRYLSSHSKTVL
HHHCCCEEECCCEEEEECCCEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEE
LVLGLEEFVMKSNAGIRDEMFFMDLLRSFLNVPQRIAVYFINPSLISERARAQLEELSTR
EEECHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHCE
VISVECSNGILVKIKKSIKPEEQGVEILVPMDHIIESEPHQGS
EEEEEECCCEEEEEECCCCCCCCCCEEEEEHHHHHCCCCCCCC
>Mature Secondary Structure
MKALEDFVRSFKMGETVTVELSSCSPLHLIFYSALKFAQEKGTNVLILDGFDRLAIIVQD
CCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
LKSVGIDVDLDNLDVIKGGGTLRTGNIIAHIDVSHDERVYIRKYRDTFRRYLSSHSKTVL
HHHCCCEEECCCEEEEECCCEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEE
LVLGLEEFVMKSNAGIRDEMFFMDLLRSFLNVPQRIAVYFINPSLISERARAQLEELSTR
EEECHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHCE
VISVECSNGILVKIKKSIKPEEQGVEILVPMDHIIESEPHQGS
EEEEEECCCEEEEEECCCCCCCCCCEEEEEHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA