| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223578
Identifier: 212223578
GI number: 212223578
Start: 403938
End: 404609
Strand: Reverse
Name: 212223578
Synonym: TON_0432
Alternate gene names: NA
Gene position: 404609-403938 (Counterclockwise)
Preceding gene: 212223579
Following gene: 212223575
Centisome position: 21.9
GC content: 46.13
Gene sequence:
>672_bases ATGAAAGCTCTGGAAGATTTTGTGAGGTCGTTCAAAATGGGAGAAACTGTAACCGTTGAGCTGTCATCATGTTCACCGCT TCATCTTATTTTCTATAGTGCCCTTAAGTTCGCGCAGGAGAAGGGTACGAACGTTCTGATCCTAGATGGGTTTGACCGGC TAGCAATCATTGTTCAAGACCTTAAGAGCGTCGGCATTGATGTCGATCTAGACAATCTTGATGTTATAAAAGGTGGGGGA ACGCTAAGAACAGGAAACATAATAGCACACATTGATGTGTCCCACGACGAAAGGGTTTACATTAGAAAGTACAGGGATAC GTTCCGCAGGTACCTCAGTTCTCATTCTAAAACTGTGTTGCTTGTCCTTGGGTTGGAAGAGTTCGTTATGAAGAGCAACG CCGGAATTAGGGATGAGATGTTCTTTATGGACCTTCTCAGATCCTTTCTTAACGTCCCCCAGAGAATCGCGGTTTATTTC ATCAACCCCAGCCTGATCAGCGAGCGTGCGCGGGCTCAGCTGGAAGAGCTCTCCACAAGGGTTATCTCAGTGGAGTGCTC CAACGGCATATTGGTAAAAATCAAGAAGAGCATAAAACCCGAGGAACAGGGAGTCGAGATACTTGTACCCATGGACCATA TTATCGAGTCAGAGCCCCATCAAGGATCTTGA
Upstream 100 bases:
>100_bases AGTTTTACCTTCCAATTATCCTTGAGATCAAAGAGGGCGGAAAGAAAGCTGAGATCATTAAGCATCTTCGTCTGGAGTTC GTTGGTTTGGAGGTGGTACC
Downstream 100 bases:
>100_bases GCCTCTCTCTAACTTCATCGCTTAATAGGGATTCGAGCTCCTCCCTCGCTTTTTTTGAGAGTTCGAACTTCTCCAAGCCC TTTGAAACACTTACCCAGCT
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MKALEDFVRSFKMGETVTVELSSCSPLHLIFYSALKFAQEKGTNVLILDGFDRLAIIVQDLKSVGIDVDLDNLDVIKGGG TLRTGNIIAHIDVSHDERVYIRKYRDTFRRYLSSHSKTVLLVLGLEEFVMKSNAGIRDEMFFMDLLRSFLNVPQRIAVYF INPSLISERARAQLEELSTRVISVECSNGILVKIKKSIKPEEQGVEILVPMDHIIESEPHQGS
Sequences:
>Translated_223_residues MKALEDFVRSFKMGETVTVELSSCSPLHLIFYSALKFAQEKGTNVLILDGFDRLAIIVQDLKSVGIDVDLDNLDVIKGGG TLRTGNIIAHIDVSHDERVYIRKYRDTFRRYLSSHSKTVLLVLGLEEFVMKSNAGIRDEMFFMDLLRSFLNVPQRIAVYF INPSLISERARAQLEELSTRVISVECSNGILVKIKKSIKPEEQGVEILVPMDHIIESEPHQGS >Mature_223_residues MKALEDFVRSFKMGETVTVELSSCSPLHLIFYSALKFAQEKGTNVLILDGFDRLAIIVQDLKSVGIDVDLDNLDVIKGGG TLRTGNIIAHIDVSHDERVYIRKYRDTFRRYLSSHSKTVLLVLGLEEFVMKSNAGIRDEMFFMDLLRSFLNVPQRIAVYF INPSLISERARAQLEELSTRVISVECSNGILVKIKKSIKPEEQGVEILVPMDHIIESEPHQGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25199; Mature: 25199
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALEDFVRSFKMGETVTVELSSCSPLHLIFYSALKFAQEKGTNVLILDGFDRLAIIVQD CCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH LKSVGIDVDLDNLDVIKGGGTLRTGNIIAHIDVSHDERVYIRKYRDTFRRYLSSHSKTVL HHHCCCEEECCCEEEEECCCEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEE LVLGLEEFVMKSNAGIRDEMFFMDLLRSFLNVPQRIAVYFINPSLISERARAQLEELSTR EEECHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHCE VISVECSNGILVKIKKSIKPEEQGVEILVPMDHIIESEPHQGS EEEEEECCCEEEEEECCCCCCCCCCEEEEEHHHHHCCCCCCCC >Mature Secondary Structure MKALEDFVRSFKMGETVTVELSSCSPLHLIFYSALKFAQEKGTNVLILDGFDRLAIIVQD CCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH LKSVGIDVDLDNLDVIKGGGTLRTGNIIAHIDVSHDERVYIRKYRDTFRRYLSSHSKTVL HHHCCCEEECCCEEEEECCCEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEE LVLGLEEFVMKSNAGIRDEMFFMDLLRSFLNVPQRIAVYFINPSLISERARAQLEELSTR EEECHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHCE VISVECSNGILVKIKKSIKPEEQGVEILVPMDHIIESEPHQGS EEEEEECCCEEEEEECCCCCCCCCCEEEEEHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA