Click here to switch to the map view.

The map label for this gene is 212223403

Identifier: 212223403

GI number: 212223403

Start: 229347

End: 230045

Strand: Reverse

Name: 212223403

Synonym: TON_0257

Alternate gene names: NA

Gene position: 230045-229347 (Counterclockwise)

Preceding gene: 212223406

Following gene: 212223402

Centisome position: 12.45

GC content: 53.51

Gene sequence:

>699_bases
ATGCTCGCGCTCAACCGTCTCGTGGAGGAGAGGGACGCGGAGAAAATCCTTGAATACGCCCGCGAGTTCCATGGCCATGT
TTGTCCATACCTAGCCCTCGGAATAAGGGCTTCACTGATAGCAATGGAGGAACTAGGTGTCGGAAGGCTTGACTATTCTG
GAAGCGTCGATGAGTCCATTCTTGCCATAGTCGAGGTCAACAGCTGCTTTACTGACGGCGTCCAGGTAGCTACAGGCTGC
ACGCTGGGAAATAACTCCATGATATACATCGATCTCGGCAAGACAGCCCTGACTCTCGTCAAACGCTCCACATGGGAGGG
CGTTAGGGTCTACACCGATGCTGAGAAGCTGAGGAAGTACTACCCTTCGGGCACAACCGAGCTCTTCAATAAGGTCGTTA
AGGAACGGAAAGGAACCCCTGAAGAGCGGAAGCGCCTCTGGGGGCTCTGGGAATCGATTGCTAAGACCATGCTTTACCTG
CCAAAAGAAGAGTTCAAAATCGAGCGCGTCAAGGTTCCGCCAATCGAACAGGCGCCAATAGTTGAGAGCATCCGCTGCTC
TCGCTGTGGCGAGCTGGTCATGTCCACGAGGATCGTTTACATCAACGAGGAGCCTCTCTGCATGAGATGCGCTAATGAGA
AGTATCACGCCATCATCGGCAGAGGCATAGTCGATGTCAACAGCTTTAGGGGGTGCTGA

Upstream 100 bases:

>100_bases
GAAAACTCATTCATTAAAAACCTGCCGCAACCAAGGGTTGATAACACCTGGGTTCAAAAATGATTAAAAGCGTGTTACTT
TTACTGTTATTGGTGATACC

Downstream 100 bases:

>100_bases
AATGAGGAAGGCTCTGGCTCTACTTCTCGTTCTGCTGGTTGTCTCTGTAAGCGGGTGCATAGGCACGACGGAAAATCCAA
CCAATACTGCAACCACAGAG

Product: fwdE-like tungsten formylmethanofuran dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MLALNRLVEERDAEKILEYAREFHGHVCPYLALGIRASLIAMEELGVGRLDYSGSVDESILAIVEVNSCFTDGVQVATGC
TLGNNSMIYIDLGKTALTLVKRSTWEGVRVYTDAEKLRKYYPSGTTELFNKVVKERKGTPEERKRLWGLWESIAKTMLYL
PKEEFKIERVKVPPIEQAPIVESIRCSRCGELVMSTRIVYINEEPLCMRCANEKYHAIIGRGIVDVNSFRGC

Sequences:

>Translated_232_residues
MLALNRLVEERDAEKILEYAREFHGHVCPYLALGIRASLIAMEELGVGRLDYSGSVDESILAIVEVNSCFTDGVQVATGC
TLGNNSMIYIDLGKTALTLVKRSTWEGVRVYTDAEKLRKYYPSGTTELFNKVVKERKGTPEERKRLWGLWESIAKTMLYL
PKEEFKIERVKVPPIEQAPIVESIRCSRCGELVMSTRIVYINEEPLCMRCANEKYHAIIGRGIVDVNSFRGC
>Mature_232_residues
MLALNRLVEERDAEKILEYAREFHGHVCPYLALGIRASLIAMEELGVGRLDYSGSVDESILAIVEVNSCFTDGVQVATGC
TLGNNSMIYIDLGKTALTLVKRSTWEGVRVYTDAEKLRKYYPSGTTELFNKVVKERKGTPEERKRLWGLWESIAKTMLYL
PKEEFKIERVKVPPIEQAPIVESIRCSRCGELVMSTRIVYINEEPLCMRCANEKYHAIIGRGIVDVNSFRGC

Specific function: Unknown

COG id: COG2191

COG function: function code C; Formylmethanofuran dehydrogenase subunit E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003814
- InterPro:   IPR018316
- InterPro:   IPR001378 [H]

Pfam domain/function: PF02663 FwdE; PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 26260; Mature: 26260

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALNRLVEERDAEKILEYAREFHGHVCPYLALGIRASLIAMEELGVGRLDYSGSVDESI
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHE
LAIVEVNSCFTDGVQVATGCTLGNNSMIYIDLGKTALTLVKRSTWEGVRVYTDAEKLRKY
EEEEEECCHHCCCCHHHCCEEECCCCEEEEECCHHHHHHHHHCCCCCEEEEECHHHHHHH
YPSGTTELFNKVVKERKGTPEERKRLWGLWESIAKTMLYLPKEEFKIERVKVPPIEQAPI
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCH
VESIRCSRCGELVMSTRIVYINEEPLCMRCANEKYHAIIGRGIVDVNSFRGC
HHHHHHHHHHHHHHHCEEEEECCCCCEEECCCCHHHHHHHCCEEECCCCCCC
>Mature Secondary Structure
MLALNRLVEERDAEKILEYAREFHGHVCPYLALGIRASLIAMEELGVGRLDYSGSVDESI
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHE
LAIVEVNSCFTDGVQVATGCTLGNNSMIYIDLGKTALTLVKRSTWEGVRVYTDAEKLRKY
EEEEEECCHHCCCCHHHCCEEECCCCEEEEECCHHHHHHHHHCCCCCEEEEECHHHHHHH
YPSGTTELFNKVVKERKGTPEERKRLWGLWESIAKTMLYLPKEEFKIERVKVPPIEQAPI
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCH
VESIRCSRCGELVMSTRIVYINEEPLCMRCANEKYHAIIGRGIVDVNSFRGC
HHHHHHHHHHHHHHHCEEEEECCCCCEEECCCCHHHHHHHCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]