Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209696430

Identifier: 209696430

GI number: 209696430

Start: 3295673

End: 3296062

Strand: Direct

Name: 209696430

Synonym: VSAL_I3044

Alternate gene names: NA

Gene position: 3295673-3296062 (Clockwise)

Preceding gene: 209696429

Following gene: 209696431

Centisome position: 99.11

GC content: 37.18

Gene sequence:

>390_bases
ATGATTGATTCTATCGTTAGCCTAGCTAAAGTCGATGACAGCATTGAGCTTGTATGGCTATATGGTTCACGCGCTCAAGG
TACGCATCATCAAGAGAGTGATTTTGATTTAGCGGTGGCATTTAATGATCATTCGTTATCTACTTTTGCTTTGCGAACTC
GCCCTGAGTGTTTGGCTATGGAATGGGCTGAGCATTTGAACCTACCCTTAGATAAAGTCAGTATCGTTGATATCAATCAC
ATACCAATAGCCCTTGCATTTAACGTCATTGAGTACGGGAAACTGATTTATAACAATAATCCTCTTCTGTTTTATAAAGA
GCAAAATCGTATTAACTCAATGTTTGAACATCAATTAATTGAAAGCAAAAGAAGTGCATTGTATGAATAA

Upstream 100 bases:

>100_bases
TTGATCTTATAGAAGCGAAGCGGTCTAGTTTCTAGTTAGCGCAGCGTATAGTCTTTAACCCTGCTATAGTATCCAAATAA
ACAACAATAATGGATTAAGT

Downstream 100 bases:

>100_bases
AGGTCTTGAATTATATCTAGCGGAAGTTGAGTCTCATAAAGCAAAATACCTCAAAGAGTTAAATGAGCTTCGTGTTGACC
TTAATCAGTCGACCTTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MIDSIVSLAKVDDSIELVWLYGSRAQGTHHQESDFDLAVAFNDHSLSTFALRTRPECLAMEWAEHLNLPLDKVSIVDINH
IPIALAFNVIEYGKLIYNNNPLLFYKEQNRINSMFEHQLIESKRSALYE

Sequences:

>Translated_129_residues
MIDSIVSLAKVDDSIELVWLYGSRAQGTHHQESDFDLAVAFNDHSLSTFALRTRPECLAMEWAEHLNLPLDKVSIVDINH
IPIALAFNVIEYGKLIYNNNPLLFYKEQNRINSMFEHQLIESKRSALYE
>Mature_129_residues
MIDSIVSLAKVDDSIELVWLYGSRAQGTHHQESDFDLAVAFNDHSLSTFALRTRPECLAMEWAEHLNLPLDKVSIVDINH
IPIALAFNVIEYGKLIYNNNPLLFYKEQNRINSMFEHQLIESKRSALYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14863; Mature: 14863

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDSIVSLAKVDDSIELVWLYGSRAQGTHHQESDFDLAVAFNDHSLSTFALRTRPECLAM
CCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHH
EWAEHLNLPLDKVSIVDINHIPIALAFNVIEYGKLIYNNNPLLFYKEQNRINSMFEHQLI
HHHHHCCCCCCCEEEEEECCCCEEEEHHHHHHCEEEECCCCEEEEECCCHHHHHHHHHHH
ESKRSALYE
HHHHHHCCC
>Mature Secondary Structure
MIDSIVSLAKVDDSIELVWLYGSRAQGTHHQESDFDLAVAFNDHSLSTFALRTRPECLAM
CCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHH
EWAEHLNLPLDKVSIVDINHIPIALAFNVIEYGKLIYNNNPLLFYKEQNRINSMFEHQLI
HHHHHCCCCCCCEEEEEECCCCEEEEHHHHHHCEEEECCCCEEEEECCCHHHHHHHHHHH
ESKRSALYE
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA