| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209696401
Identifier: 209696401
GI number: 209696401
Start: 3258780
End: 3259088
Strand: Direct
Name: 209696401
Synonym: VSAL_I3008
Alternate gene names: NA
Gene position: 3258780-3259088 (Clockwise)
Preceding gene: 209696400
Following gene: 209696402
Centisome position: 98.0
GC content: 37.86
Gene sequence:
>309_bases ATGAAGATATTAAAACAATCTGAAAAACAACAAATTTTAGCAAGGCATATTACATTAGCGAATGGCCGCCCGCGAGAGCT GCTAGATCTAATGCAGAAAGTCTACCCGACTCCGATAAGCAAAGCATACATTTGCCAACAGTTATCAATGCACGGTGAAT ACGCATTTCGCTCTGTTTTGAGAAACGCCAGTATCTTTATTGATATAGATGCCATTAATGAAACAGATAAACCCACGATG TATCGGTTAGGAAACCAATACATACAGAGCGCACAAATACGCATAATATTTCAAATAATGGCAAGTTAA
Upstream 100 bases:
>100_bases ACAAAAGAACCCATAGAGCACCGCATTCAAGCCATGTTAGAGAAAAGCAACAATAAGTAAATACAAAAATAAGACCGAAT AAATAAGCTATGGACCGCGA
Downstream 100 bases:
>100_bases AGAGTGATATTAATAGGAAAACAGGGTGTATTATGTGAAGAAATGGGATAAAATGCAGAAGACTAGAGACTAGAGACTAG AGACTAGAGACTAGAGACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MKILKQSEKQQILARHITLANGRPRELLDLMQKVYPTPISKAYICQQLSMHGEYAFRSVLRNASIFIDIDAINETDKPTM YRLGNQYIQSAQIRIIFQIMAS
Sequences:
>Translated_102_residues MKILKQSEKQQILARHITLANGRPRELLDLMQKVYPTPISKAYICQQLSMHGEYAFRSVLRNASIFIDIDAINETDKPTM YRLGNQYIQSAQIRIIFQIMAS >Mature_102_residues MKILKQSEKQQILARHITLANGRPRELLDLMQKVYPTPISKAYICQQLSMHGEYAFRSVLRNASIFIDIDAINETDKPTM YRLGNQYIQSAQIRIIFQIMAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11829; Mature: 11829
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILKQSEKQQILARHITLANGRPRELLDLMQKVYPTPISKAYICQQLSMHGEYAFRSVL CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHH RNASIFIDIDAINETDKPTMYRLGNQYIQSAQIRIIFQIMAS CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEECCC >Mature Secondary Structure MKILKQSEKQQILARHITLANGRPRELLDLMQKVYPTPISKAYICQQLSMHGEYAFRSVL CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHH RNASIFIDIDAINETDKPTMYRLGNQYIQSAQIRIIFQIMAS CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA