Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209696364

Identifier: 209696364

GI number: 209696364

Start: 3216114

End: 3216305

Strand: Direct

Name: 209696364

Synonym: VSAL_I2970

Alternate gene names: NA

Gene position: 3216114-3216305 (Clockwise)

Preceding gene: 209696363

Following gene: 209696365

Centisome position: 96.72

GC content: 36.46

Gene sequence:

>192_bases
ATGCTTACTCAAATAGATCGCCTTACTATTTACTGCGTGCTGTGTTTTGTCACTATCTGTTCATTGGTTTTCAGCACACC
TAACACCATGAGCCTCTTTCCATTAATTAGTTTAGCTTCGGTTATGATAGCGTTAACGATTGAACTAAAAACATGGAGTG
AATCAGAGGCTATTGAAGATAAAGATCATTAA

Upstream 100 bases:

>100_bases
TACCTTAAAGTAACAATAAATTAACATGGAACAGTTAAGTTGTTGTTTCTATGGTTTATAAAATCTCCTGTAGAAAAGTA
ATAAAAGAAGGATCGCCATT

Downstream 100 bases:

>100_bases
CCTCAGAATGTAACTGAAATATATCGACTCCAGTTTCCCGTATTATCACGTATTCTTGATATTAAATAAGAGGTAGGTGA
AAAGCGGGATTTTTTTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:

>63_residues
MLTQIDRLTIYCVLCFVTICSLVFSTPNTMSLFPLISLASVMIALTIELKTWSESEAIEDKDH

Sequences:

>Translated_63_residues
MLTQIDRLTIYCVLCFVTICSLVFSTPNTMSLFPLISLASVMIALTIELKTWSESEAIEDKDH
>Mature_63_residues
MLTQIDRLTIYCVLCFVTICSLVFSTPNTMSLFPLISLASVMIALTIELKTWSESEAIEDKDH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7097; Mature: 7097

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTQIDRLTIYCVLCFVTICSLVFSTPNTMSLFPLISLASVMIALTIELKTWSESEAIED
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
KDH
CCC
>Mature Secondary Structure
MLTQIDRLTIYCVLCFVTICSLVFSTPNTMSLFPLISLASVMIALTIELKTWSESEAIED
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
KDH
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA