Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is yhiN [H]

Identifier: 209696346

GI number: 209696346

Start: 3193951

End: 3195156

Strand: Direct

Name: yhiN [H]

Synonym: VSAL_I2949

Alternate gene names: 209696346

Gene position: 3193951-3195156 (Clockwise)

Preceding gene: 209696345

Following gene: 209696347

Centisome position: 96.05

GC content: 41.21

Gene sequence:

>1206_bases
TTGAATTTGGGTGAGAGTGTCATGAAAAAAGTAGACGTAGTGGTTATCGGTGCAGGCGCTGCAGGATTAATGTGTGCAGC
TGAAGCCGGCAAACGAGGCCGCAGTGTTTTAGTTGTCGATCACGCTAAAAAACCGGGACGTAAAATTTTAATCTCTGGTG
GTGGTCGTTGTAATTTTACGAATTACGATGTGTCAGCAACTCACTTTGTTTGTAACAACGCTCACTTTGTGAAATCGGCA
TTGTCTCAATACACTAACTGGGATTTCATCTCTTTAGTGTCTAAATACGGCATCGAATTTGAAGAGCGCGATCATGGCCA
ATTATTCTGTGTCGATTCGGCAAAAGAAATTGTCGATATGCTGCTAAAAGAATGTGAACTGGCTAATGTGAATTATCGCT
ACCGCTGCGAGATTCAGGATGTTAAAAAGAGTGAATCCGGTTTTTCTCTGATGCTTGATACTGATCGTATCGAATGTGAA
TCTTTGGTGATCGCGACGGGTGGACTATCAATGCCGAAATTAGGTGCAACCCCGTTTGGTTATCAATTGGCTGAGCAGTT
TGGTTTATCAATGGTTCCAACGACGGCAGGTCTTGTTCCGTTCACGTTGCATAAAGAAGATAAAGACGCGTTTTCTGAAC
TGTCAGGCATTGCGATTCCAGTGGTTGTAGAATCAGAAAGTGGTGATAGCTTTAAAGAAAATCTCTTATTTACCCACCGT
GGTTTATCTGGCCCCTCAATCCTACAAATTTCTTCATATTGGAACGCAGGTCAAAAAGTAATGATAGATTTGTTACCAAA
TGACGATTTGTCCGAAGAATTAGATACTATGCGTATCGATCATCCCAATCAAAGCGTTAAAAATTCATTAGCTAAATTAT
TGCCTAAAAGAGTGGTTGAAACCTTATTAAAGAATACTATTTTTAATGATCGTTCTCTTAAGCAAATCAATAACAAAGAA
CAAGAACAGCTGTGTTCGTTGTTCCATAAATGGCAAGTTCTTCCTAATGGCACTGAAGGGTATCGTACCGCGGAAGTCAC
GCTAGGAGGGGTTGATAGCAATGAATTGTCGTCTAAAACCATGGAATCGAAAAAAGTACCTGGTCTGTATTTTGTCGGGG
AAGTAATGGATGTAAGTGGTTGGCTTGGCGGCTATAACTTTCAGTGGGCATGGTCGAGCGGTTATGTTGCAGGGATAAAC
GTATAG

Upstream 100 bases:

>100_bases
CTTCATGTTATCGAGTGCTTTGCTTTTCGTTACCGTCGCGGTGTTTTTCTTGGTAATTAGTTTGGGCATCTAGAGCTGAA
AATAGTAAACTCCCTCCCAA

Downstream 100 bases:

>100_bases
GATTACCTAATAATCATTAAGTCATTATTGGTTTATTCTAAAAATAGGGGCGCATAGGTGCCTCTGTTTTATATGTGACG
AGCTAAATATATTAAAATAA

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MNLGESVMKKVDVVVIGAGAAGLMCAAEAGKRGRSVLVVDHAKKPGRKILISGGGRCNFTNYDVSATHFVCNNAHFVKSA
LSQYTNWDFISLVSKYGIEFEERDHGQLFCVDSAKEIVDMLLKECELANVNYRYRCEIQDVKKSESGFSLMLDTDRIECE
SLVIATGGLSMPKLGATPFGYQLAEQFGLSMVPTTAGLVPFTLHKEDKDAFSELSGIAIPVVVESESGDSFKENLLFTHR
GLSGPSILQISSYWNAGQKVMIDLLPNDDLSEELDTMRIDHPNQSVKNSLAKLLPKRVVETLLKNTIFNDRSLKQINNKE
QEQLCSLFHKWQVLPNGTEGYRTAEVTLGGVDSNELSSKTMESKKVPGLYFVGEVMDVSGWLGGYNFQWAWSSGYVAGIN
V

Sequences:

>Translated_401_residues
MNLGESVMKKVDVVVIGAGAAGLMCAAEAGKRGRSVLVVDHAKKPGRKILISGGGRCNFTNYDVSATHFVCNNAHFVKSA
LSQYTNWDFISLVSKYGIEFEERDHGQLFCVDSAKEIVDMLLKECELANVNYRYRCEIQDVKKSESGFSLMLDTDRIECE
SLVIATGGLSMPKLGATPFGYQLAEQFGLSMVPTTAGLVPFTLHKEDKDAFSELSGIAIPVVVESESGDSFKENLLFTHR
GLSGPSILQISSYWNAGQKVMIDLLPNDDLSEELDTMRIDHPNQSVKNSLAKLLPKRVVETLLKNTIFNDRSLKQINNKE
QEQLCSLFHKWQVLPNGTEGYRTAEVTLGGVDSNELSSKTMESKKVPGLYFVGEVMDVSGWLGGYNFQWAWSSGYVAGIN
V
>Mature_401_residues
MNLGESVMKKVDVVVIGAGAAGLMCAAEAGKRGRSVLVVDHAKKPGRKILISGGGRCNFTNYDVSATHFVCNNAHFVKSA
LSQYTNWDFISLVSKYGIEFEERDHGQLFCVDSAKEIVDMLLKECELANVNYRYRCEIQDVKKSESGFSLMLDTDRIECE
SLVIATGGLSMPKLGATPFGYQLAEQFGLSMVPTTAGLVPFTLHKEDKDAFSELSGIAIPVVVESESGDSFKENLLFTHR
GLSGPSILQISSYWNAGQKVMIDLLPNDDLSEELDTMRIDHPNQSVKNSLAKLLPKRVVETLLKNTIFNDRSLKQINNKE
QEQLCSLFHKWQVLPNGTEGYRTAEVTLGGVDSNELSSKTMESKKVPGLYFVGEVMDVSGWLGGYNFQWAWSSGYVAGIN
V

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0933 [H]

Homologues:

Organism=Escherichia coli, GI2367234, Length=388, Percent_Identity=61.5979381443299, Blast_Score=491, Evalue=1e-140,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027
- InterPro:   IPR023166 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 44180; Mature: 44180

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLGESVMKKVDVVVIGAGAAGLMCAAEAGKRGRSVLVVDHAKKPGRKILISGGGRCNFT
CCCHHHHHHHEEEEEEECCCHHHHEEHHCCCCCCEEEEEECCCCCCCEEEEECCCEEECC
NYDVSATHFVCNNAHFVKSALSQYTNWDFISLVSKYGIEFEERDHGQLFCVDSAKEIVDM
CCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCEEEECCHHHHHHH
LLKECELANVNYRYRCEIQDVKKSESGFSLMLDTDRIECESLVIATGGLSMPKLGATPFG
HHHHHHCCCCCEEEEEEEHHCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCH
YQLAEQFGLSMVPTTAGLVPFTLHKEDKDAFSELSGIAIPVVVESESGDSFKENLLFTHR
HHHHHHCCCEECCCCCCCEEEEEECCCHHHHHHHCCCEEEEEEECCCCCCHHHCEEEEEC
GLSGPSILQISSYWNAGQKVMIDLLPNDDLSEELDTMRIDHPNQSVKNSLAKLLPKRVVE
CCCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
TLLKNTIFNDRSLKQINNKEQEQLCSLFHKWQVLPNGTEGYRTAEVTLGGVDSNELSSKT
HHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHEECCCCCCCEEEEEEEEECCCCHHHHHHH
MESKKVPGLYFVGEVMDVSGWLGGYNFQWAWSSGYVAGINV
HHHHCCCCEEEEHHHHCCCCCCCCCEEEEEECCCEEEEECC
>Mature Secondary Structure
MNLGESVMKKVDVVVIGAGAAGLMCAAEAGKRGRSVLVVDHAKKPGRKILISGGGRCNFT
CCCHHHHHHHEEEEEEECCCHHHHEEHHCCCCCCEEEEEECCCCCCCEEEEECCCEEECC
NYDVSATHFVCNNAHFVKSALSQYTNWDFISLVSKYGIEFEERDHGQLFCVDSAKEIVDM
CCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCEEEECCHHHHHHH
LLKECELANVNYRYRCEIQDVKKSESGFSLMLDTDRIECESLVIATGGLSMPKLGATPFG
HHHHHHCCCCCEEEEEEEHHCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCH
YQLAEQFGLSMVPTTAGLVPFTLHKEDKDAFSELSGIAIPVVVESESGDSFKENLLFTHR
HHHHHHCCCEECCCCCCCEEEEEECCCHHHHHHHCCCEEEEEEECCCCCCHHHCEEEEEC
GLSGPSILQISSYWNAGQKVMIDLLPNDDLSEELDTMRIDHPNQSVKNSLAKLLPKRVVE
CCCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
TLLKNTIFNDRSLKQINNKEQEQLCSLFHKWQVLPNGTEGYRTAEVTLGGVDSNELSSKT
HHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHEECCCCCCCEEEEEEEEECCCCHHHHHHH
MESKKVPGLYFVGEVMDVSGWLGGYNFQWAWSSGYVAGINV
HHHHCCCCEEEEHHHHCCCCCCCCCEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]