Click here to switch to the map view.

The map label for this gene is pldB [H]

Identifier: 209696329

GI number: 209696329

Start: 3176743

End: 3177711

Strand: Direct

Name: pldB [H]

Synonym: VSAL_I2931

Alternate gene names: 209696329

Gene position: 3176743-3177711 (Clockwise)

Preceding gene: 209696327

Following gene: 209696330

Centisome position: 95.54

GC content: 39.01

Gene sequence:

>969_bases
ATGACAGCACCTGAACTTACTCAAGAACCACAATACCATGATACCATGAAATACAACGTAGCTCCATTTTGGGAGAAGCG
TCAACATGGATTTCTACAAGGTGAAAAAACCACTCAACTACACTGGGTAAGTTTCACAAGTCCAAGTCATAAGAAAGCGA
TCATGGTGGTTAATGGTCGTATTGAGAGTGTGTATAAATACCAAGAACTCTTTTATGATTTATTTTGCCAAGGCTATGAC
ATTTATTCATTTGATCATCGTGGGCAAGGCTTATCCGATCGTTTAACAGACAATATCGACATTGGCCACATTGAAGATTT
TAATGATTACATTCTTGATCTCAACACCATGACTCAATCATTGATTACACCCGAGAATTATGAAGACTGCTACCTTCTTG
GTCACTCAATGGGAGGTGCTATTGCAACGCAATACGTTGAATGTTTTTCTCACCCATACTCTGCCCTTGTATTAAGCGCA
CCAATGCACGGTATTTACATGAAACCGTGGTTAAAGCCTATCGCAAGCCCTGTTAGTCATTATTTAAGTCAATGGTCTGC
CCTGCCTTCTTATGCGTTAGGTCAATCACCTTATCAAGCAAAACCGTTTTTAGATAATCCACTAACCACCAGTGAAATTC
GTTACCAATGGTTTAGAGATTTATATCAAGCCTTCCCGGAACTGCAAATTGGTGGCCCAAGTAATCACTGGGTTAATCAA
GGTATTAAAGGAGCAAAACGGTGTATTGCTCAAGCACCTGCTTGCACAATACCAACCTTATTAATGCAGGGTGAAAAAGA
TAAAATTGTAGATAACAAATCACACCTCAAATTTCAGAAAAAAGCCCCTAATTGCCAGCTCATCACGATTAAAGAGGCAA
AGCATGAATTATTATTTGAATCTGATGCCTGCAGAAATCAAGCCTTACTGGAAACATTCGCTTTCTTTGAGGCTCATTCA
AAAAAATAA

Upstream 100 bases:

>100_bases
TGATTAAGAACCACACAAGAACTTACTAAAATATGATATTCCTTTCTTAATTATCCTTATAATACCTCATTGATGTAGTT
ATTTTAAAATAGTGACCTTT

Downstream 100 bases:

>100_bases
TGCCTCCGCGACAGGCTAAAAGGGGAAAGATCATAATTGCTATCTTTACCCTCTTTTTTCATTACAAAGTGACGTAAACT
GGCCTCAGTTAACTTTGAAC

Product: lysophospholipase L2 LypA

Products: NA

Alternate protein names: Lecithinase B [H]

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MTAPELTQEPQYHDTMKYNVAPFWEKRQHGFLQGEKTTQLHWVSFTSPSHKKAIMVVNGRIESVYKYQELFYDLFCQGYD
IYSFDHRGQGLSDRLTDNIDIGHIEDFNDYILDLNTMTQSLITPENYEDCYLLGHSMGGAIATQYVECFSHPYSALVLSA
PMHGIYMKPWLKPIASPVSHYLSQWSALPSYALGQSPYQAKPFLDNPLTTSEIRYQWFRDLYQAFPELQIGGPSNHWVNQ
GIKGAKRCIAQAPACTIPTLLMQGEKDKIVDNKSHLKFQKKAPNCQLITIKEAKHELLFESDACRNQALLETFAFFEAHS
KK

Sequences:

>Translated_322_residues
MTAPELTQEPQYHDTMKYNVAPFWEKRQHGFLQGEKTTQLHWVSFTSPSHKKAIMVVNGRIESVYKYQELFYDLFCQGYD
IYSFDHRGQGLSDRLTDNIDIGHIEDFNDYILDLNTMTQSLITPENYEDCYLLGHSMGGAIATQYVECFSHPYSALVLSA
PMHGIYMKPWLKPIASPVSHYLSQWSALPSYALGQSPYQAKPFLDNPLTTSEIRYQWFRDLYQAFPELQIGGPSNHWVNQ
GIKGAKRCIAQAPACTIPTLLMQGEKDKIVDNKSHLKFQKKAPNCQLITIKEAKHELLFESDACRNQALLETFAFFEAHS
KK
>Mature_321_residues
TAPELTQEPQYHDTMKYNVAPFWEKRQHGFLQGEKTTQLHWVSFTSPSHKKAIMVVNGRIESVYKYQELFYDLFCQGYDI
YSFDHRGQGLSDRLTDNIDIGHIEDFNDYILDLNTMTQSLITPENYEDCYLLGHSMGGAIATQYVECFSHPYSALVLSAP
MHGIYMKPWLKPIASPVSHYLSQWSALPSYALGQSPYQAKPFLDNPLTTSEIRYQWFRDLYQAFPELQIGGPSNHWVNQG
IKGAKRCIAQAPACTIPTLLMQGEKDKIVDNKSHLKFQKKAPNCQLITIKEAKHELLFESDACRNQALLETFAFFEAHSK
K

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cell inner membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994980, Length=316, Percent_Identity=36.0759493670886, Blast_Score=201, Evalue=5e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.5 [H]

Molecular weight: Translated: 36963; Mature: 36832

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPELTQEPQYHDTMKYNVAPFWEKRQHGFLQGEKTTQLHWVSFTSPSHKKAIMVVNGR
CCCCCCCCCCCCCCCEECCCCCCHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEECCC
IESVYKYQELFYDLFCQGYDIYSFDHRGQGLSDRLTDNIDIGHIEDFNDYILDLNTMTQS
HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHCCCCCCCCCCCCHHHEEEHHHHHHH
LITPENYEDCYLLGHSMGGAIATQYVECFSHPYSALVLSAPMHGIYMKPWLKPIASPVSH
HCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHEEECCCCCCEEHHHHHHHHHHHHHH
YLSQWSALPSYALGQSPYQAKPFLDNPLTTSEIRYQWFRDLYQAFPELQIGGPSNHWVNQ
HHHHHHCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHH
GIKGAKRCIAQAPACTIPTLLMQGEKDKIVDNKSHLKFQKKAPNCQLITIKEAKHELLFE
HHHHHHHHHHCCCCCHHHHHHHCCCCHHCCCCHHHCEEECCCCCEEEEEECCHHHHHHHC
SDACRNQALLETFAFFEAHSKK
CHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TAPELTQEPQYHDTMKYNVAPFWEKRQHGFLQGEKTTQLHWVSFTSPSHKKAIMVVNGR
CCCCCCCCCCCCCCEECCCCCCHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEEECCC
IESVYKYQELFYDLFCQGYDIYSFDHRGQGLSDRLTDNIDIGHIEDFNDYILDLNTMTQS
HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHCCCCCCCCCCCCHHHEEEHHHHHHH
LITPENYEDCYLLGHSMGGAIATQYVECFSHPYSALVLSAPMHGIYMKPWLKPIASPVSH
HCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHEEECCCCCCEEHHHHHHHHHHHHHH
YLSQWSALPSYALGQSPYQAKPFLDNPLTTSEIRYQWFRDLYQAFPELQIGGPSNHWVNQ
HHHHHHCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHH
GIKGAKRCIAQAPACTIPTLLMQGEKDKIVDNKSHLKFQKKAPNCQLITIKEAKHELLFE
HHHHHHHHHHCCCCCHHHHHHHCCCCHHCCCCHHHCEEECCCCCEEEEEECCHHHHHHHC
SDACRNQALLETFAFFEAHSKK
CHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]