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The map label for this gene is yicH [H]

Identifier: 209696327

GI number: 209696327

Start: 3173232

End: 3175214

Strand: Direct

Name: yicH [H]

Synonym: VSAL_I2929

Alternate gene names: 209696327

Gene position: 3173232-3175214 (Clockwise)

Preceding gene: 209696326

Following gene: 209696329

Centisome position: 95.43

GC content: 37.62

Gene sequence:

>1983_bases
ATGTACACCACGTTGAAAAGCCTCGGTTGGCTGCTCACTCTTTGTTTATTACTTGTGGCGGCATTCTTATCTCTTTTACA
TACGCCTTACGCACAGCCATTATTGAATCCAGTCGTTGAAAAGTTGACTCATCAAACGCTCTCCTTTGGTGGGATCTCCT
ATTCTATTCACGATCCTTCGCACCTCACCATCTCTGATGTCGTGATTCATTCTGAGCCAGAGCTACCCATTCAACAAATT
GATTTATGGCTTTCTAAGCATCCAATTCAAAATAATAAACTCGCTTTTGATAGTGTGAAAATTGATGGAATTAGCCTACA
AAACGGACTGCCTAATACTAAAAAACTCAATTGGTTTTCAATCTCTCAACTCAGTATTTCTAATTTAGATTTTGCAGATG
ATGGATTGGTCGTACGTGAAGCACAAATCCAATTAAGTAACTATGATGTGCATAATGAAAAAGGACTGCCTTTTGAAGGG
GGGTTTCAATTATCTACTCAACAACTTTACTGGCAAGGTGAAGCCCTAGATGACGTCTTAATAGATGGTTATTACACTGA
AAACTATACGGCATTACAGGGTATTTCATTAACTTGGCGCAATAGCACCATTACAGCTCAAGCCGAATTAAAAGAAAATA
AGTTATGGGTTATTCCTCAATTTACACTGCGTAAATTTAATTTAGAATCGGATAATGCCGACATTATTGGAAAGCCTCTG
CAATGGCTTTCAGAACAAGGTTTCACGTATCAATTCGAACGAATCGATCTACTCGATGTGAATATTGAATTACCTCAATT
CTCTGTCAATGATCTCAGTCTTTCTGCTGAAAACATTCTTCTTCCTTATAAGATTTGGCAGCAAAATAACGCGAATATTT
CCTTTAGTGCCGATAGCTTGGTATGGAAAGACACCATTATTAATAAGCCGATAATAGAGTTAACGCTAACAAATAAAAAA
GCGACTATTTCTAATCTTTCACTGGATGTTTTTAATGGCAACATTCAACTTTCAGGACTGCTTTCGCCTACCACGATCAA
TTTATCGTCTCTCACTTTAAACCAAATAAAATGGTTAATCAGTCCTCAAGAACTCGATTCAATCAGCAACTATCTCACTC
AATTAGAACAAGTGAACATCGCCAACTTAGACATTAATAATTCTCAGATTATTCAACTTGAAACGGCCCACCCATTCCAG
TTGTCTGGTTTAAACGTAGAAGGTCATGATCTGGATTTACTTCGTTATTATCAATGGGCTTTATGGGACGGAAAATTATC
AATAAGTGCTTCAAATGCCAGCTTAAATTATTTGCTCACTCAACAACTATTGATCGAAACAAACACGAATAATGGACGGT
GGACAATAGAGCGCGCTCTATTCCCATTAACAGAAGGGTTAATTGGACTAAATGGCAGTATTAACCTCAAACAAGACAGT
CAGCCATGGCAACTTGAGGCTTATGGTGATGGTATCCCTCTCTCGGATTTAGCGAAATGGCTTCCCAACCCAATTCCTTT
AGAAGGAATGGCTGAATTTACTTTTTCAGGTAATGGATTAGCGGTAAATAAAGACAGTTTTAATTACAGCTTTGATGGCG
ATTTAAACGTTATTCCAAGAGAAACAACAACAACAGAAACGGCCAAAGATTTGTGGCAACTAAAACTTGGGCTCATTCCA
GAAGAAAGCCAATCAGAAAAAGACGTTAGTGCTCAAACACAACGCAAGAAAGAACATACAATGGATAAAAAAACCATCTA
CCCAATCAATATTGAGCCAATTCATATTTCGGCAAACAGGGGCCGAATTTCAATTAATCCAATAATGATTACCGGTGACG
GATTTAATTATAATGTGGAAGGGGAGTATGATTTAGTGAACCCAGAAAAGGCAGAAACGGTCATCTCATTAACACAAGAA
TGCCATCAAATAGTACAGCGACTCTTTTCTGATAAAGTCGATTTAATCAATTATTGTCAGTGA

Upstream 100 bases:

>100_bases
AATCGTGATTACTCTTGAGTAAACAACGACAATAACTTGATTGAACCTGTTTTTTACTCCACTCTTTCTGTTCATCTATT
TTTCTTATTGGAGTTAATCA

Downstream 100 bases:

>100_bases
TAATGCGGTAGGCCATCAATATTAAGCTCTATTCCTTTCAAGAAATAGAGCTTTTTGATCATTTAGAAAGGATGTCTTGA
TACCATTTTTCAGCTTCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 660; Mature: 660

Protein sequence:

>660_residues
MYTTLKSLGWLLTLCLLLVAAFLSLLHTPYAQPLLNPVVEKLTHQTLSFGGISYSIHDPSHLTISDVVIHSEPELPIQQI
DLWLSKHPIQNNKLAFDSVKIDGISLQNGLPNTKKLNWFSISQLSISNLDFADDGLVVREAQIQLSNYDVHNEKGLPFEG
GFQLSTQQLYWQGEALDDVLIDGYYTENYTALQGISLTWRNSTITAQAELKENKLWVIPQFTLRKFNLESDNADIIGKPL
QWLSEQGFTYQFERIDLLDVNIELPQFSVNDLSLSAENILLPYKIWQQNNANISFSADSLVWKDTIINKPIIELTLTNKK
ATISNLSLDVFNGNIQLSGLLSPTTINLSSLTLNQIKWLISPQELDSISNYLTQLEQVNIANLDINNSQIIQLETAHPFQ
LSGLNVEGHDLDLLRYYQWALWDGKLSISASNASLNYLLTQQLLIETNTNNGRWTIERALFPLTEGLIGLNGSINLKQDS
QPWQLEAYGDGIPLSDLAKWLPNPIPLEGMAEFTFSGNGLAVNKDSFNYSFDGDLNVIPRETTTTETAKDLWQLKLGLIP
EESQSEKDVSAQTQRKKEHTMDKKTIYPINIEPIHISANRGRISINPIMITGDGFNYNVEGEYDLVNPEKAETVISLTQE
CHQIVQRLFSDKVDLINYCQ

Sequences:

>Translated_660_residues
MYTTLKSLGWLLTLCLLLVAAFLSLLHTPYAQPLLNPVVEKLTHQTLSFGGISYSIHDPSHLTISDVVIHSEPELPIQQI
DLWLSKHPIQNNKLAFDSVKIDGISLQNGLPNTKKLNWFSISQLSISNLDFADDGLVVREAQIQLSNYDVHNEKGLPFEG
GFQLSTQQLYWQGEALDDVLIDGYYTENYTALQGISLTWRNSTITAQAELKENKLWVIPQFTLRKFNLESDNADIIGKPL
QWLSEQGFTYQFERIDLLDVNIELPQFSVNDLSLSAENILLPYKIWQQNNANISFSADSLVWKDTIINKPIIELTLTNKK
ATISNLSLDVFNGNIQLSGLLSPTTINLSSLTLNQIKWLISPQELDSISNYLTQLEQVNIANLDINNSQIIQLETAHPFQ
LSGLNVEGHDLDLLRYYQWALWDGKLSISASNASLNYLLTQQLLIETNTNNGRWTIERALFPLTEGLIGLNGSINLKQDS
QPWQLEAYGDGIPLSDLAKWLPNPIPLEGMAEFTFSGNGLAVNKDSFNYSFDGDLNVIPRETTTTETAKDLWQLKLGLIP
EESQSEKDVSAQTQRKKEHTMDKKTIYPINIEPIHISANRGRISINPIMITGDGFNYNVEGEYDLVNPEKAETVISLTQE
CHQIVQRLFSDKVDLINYCQ
>Mature_660_residues
MYTTLKSLGWLLTLCLLLVAAFLSLLHTPYAQPLLNPVVEKLTHQTLSFGGISYSIHDPSHLTISDVVIHSEPELPIQQI
DLWLSKHPIQNNKLAFDSVKIDGISLQNGLPNTKKLNWFSISQLSISNLDFADDGLVVREAQIQLSNYDVHNEKGLPFEG
GFQLSTQQLYWQGEALDDVLIDGYYTENYTALQGISLTWRNSTITAQAELKENKLWVIPQFTLRKFNLESDNADIIGKPL
QWLSEQGFTYQFERIDLLDVNIELPQFSVNDLSLSAENILLPYKIWQQNNANISFSADSLVWKDTIINKPIIELTLTNKK
ATISNLSLDVFNGNIQLSGLLSPTTINLSSLTLNQIKWLISPQELDSISNYLTQLEQVNIANLDINNSQIIQLETAHPFQ
LSGLNVEGHDLDLLRYYQWALWDGKLSISASNASLNYLLTQQLLIETNTNNGRWTIERALFPLTEGLIGLNGSINLKQDS
QPWQLEAYGDGIPLSDLAKWLPNPIPLEGMAEFTFSGNGLAVNKDSFNYSFDGDLNVIPRETTTTETAKDLWQLKLGLIP
EESQSEKDVSAQTQRKKEHTMDKKTIYPINIEPIHISANRGRISINPIMITGDGFNYNVEGEYDLVNPEKAETVISLTQE
CHQIVQRLFSDKVDLINYCQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790088, Length=523, Percent_Identity=19.5028680688336, Blast_Score=90, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 74436; Mature: 74436

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTTLKSLGWLLTLCLLLVAAFLSLLHTPYAQPLLNPVVEKLTHQTLSFGGISYSIHDPS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCEEEEECCCC
HLTISDVVIHSEPELPIQQIDLWLSKHPIQNNKLAFDSVKIDGISLQNGLPNTKKLNWFS
CEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEEEE
ISQLSISNLDFADDGLVVREAQIQLSNYDVHNEKGLPFEGGFQLSTQQLYWQGEALDDVL
EEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEECEEEEEECCCCCCEE
IDGYYTENYTALQGISLTWRNSTITAQAELKENKLWVIPQFTLRKFNLESDNADIIGKPL
ECCEEECCEEEEECEEEEECCCEEEEEEEECCCEEEEEECCEEEEEECCCCCCCEECCCH
QWLSEQGFTYQFERIDLLDVNIELPQFSVNDLSLSAENILLPYKIWQQNNANISFSADSL
HHHHCCCCEEEEEEEEEEEEEEECCCEECCCEEECCCCEEEEEEEECCCCCEEEEECCCE
VWKDTIINKPIIELTLTNKKATISNLSLDVFNGNIQLSGLLSPTTINLSSLTLNQIKWLI
EEEHHHCCCCEEEEEECCCCEEEEEEEEEEEECCEEEEEECCCCEEEEEEEEHHHEEEEE
SPQELDSISNYLTQLEQVNIANLDINNSQIIQLETAHPFQLSGLNVEGHDLDLLRYYQWA
CHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCEEEECCCCCCCCCHHHEEEEEE
LWDGKLSISASNASLNYLLTQQLLIETNTNNGRWTIERALFPLTEGLIGLNGSINLKQDS
EECCEEEEEECCCEEEEEEEEEEEEEECCCCCEEEEEEEHHHHHCCEEECCCEEEECCCC
QPWQLEAYGDGIPLSDLAKWLPNPIPLEGMAEFTFSGNGLAVNKDSFNYSFDGDLNVIPR
CCEEEEEECCCCCHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCCCEEECCCCEEECC
ETTTTETAKDLWQLKLGLIPEESQSEKDVSAQTQRKKEHTMDKKTIYPINIEPIHISANR
CCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCC
GRISINPIMITGDGFNYNVEGEYDLVNPEKAETVISLTQECHQIVQRLFSDKVDLINYCQ
CEEEEEEEEEECCCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC
>Mature Secondary Structure
MYTTLKSLGWLLTLCLLLVAAFLSLLHTPYAQPLLNPVVEKLTHQTLSFGGISYSIHDPS
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCEEEEECCCC
HLTISDVVIHSEPELPIQQIDLWLSKHPIQNNKLAFDSVKIDGISLQNGLPNTKKLNWFS
CEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEEEE
ISQLSISNLDFADDGLVVREAQIQLSNYDVHNEKGLPFEGGFQLSTQQLYWQGEALDDVL
EEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEECEEEEEECCCCCCEE
IDGYYTENYTALQGISLTWRNSTITAQAELKENKLWVIPQFTLRKFNLESDNADIIGKPL
ECCEEECCEEEEECEEEEECCCEEEEEEEECCCEEEEEECCEEEEEECCCCCCCEECCCH
QWLSEQGFTYQFERIDLLDVNIELPQFSVNDLSLSAENILLPYKIWQQNNANISFSADSL
HHHHCCCCEEEEEEEEEEEEEEECCCEECCCEEECCCCEEEEEEEECCCCCEEEEECCCE
VWKDTIINKPIIELTLTNKKATISNLSLDVFNGNIQLSGLLSPTTINLSSLTLNQIKWLI
EEEHHHCCCCEEEEEECCCCEEEEEEEEEEEECCEEEEEECCCCEEEEEEEEHHHEEEEE
SPQELDSISNYLTQLEQVNIANLDINNSQIIQLETAHPFQLSGLNVEGHDLDLLRYYQWA
CHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCEEEECCCCCCCCCHHHEEEEEE
LWDGKLSISASNASLNYLLTQQLLIETNTNNGRWTIERALFPLTEGLIGLNGSINLKQDS
EECCEEEEEECCCEEEEEEEEEEEEEECCCCCEEEEEEEHHHHHCCEEECCCEEEECCCC
QPWQLEAYGDGIPLSDLAKWLPNPIPLEGMAEFTFSGNGLAVNKDSFNYSFDGDLNVIPR
CCEEEEEECCCCCHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCCCEEECCCCEEECC
ETTTTETAKDLWQLKLGLIPEESQSEKDVSAQTQRKKEHTMDKKTIYPINIEPIHISANR
CCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCC
GRISINPIMITGDGFNYNVEGEYDLVNPEKAETVISLTQECHQIVQRLFSDKVDLINYCQ
CEEEEEEEEEECCCEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]