| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is cysQ [H]
Identifier: 209696310
GI number: 209696310
Start: 3156642
End: 3157460
Strand: Reverse
Name: cysQ [H]
Synonym: VSAL_I2912
Alternate gene names: 209696310
Gene position: 3157460-3156642 (Counterclockwise)
Preceding gene: 209696311
Following gene: 209696309
Centisome position: 94.96
GC content: 41.27
Gene sequence:
>819_bases ATGGATTCTACGTTTTCACATCTTCTTCCTGACGTGATCAAAATTGCTCGCGCTTCAGGTCAATTGATTTTAGATATCTA TGAAAAAGGCGATTTTGAAGCGTTTATTAAAGCGGATCAAACGCCAGTGACAAGTGCGGATTTAGCTGCTCATAAATTGA TCATGGAAAAGCTGTCTCAACTGACGCCTGATATTCCAATTTTATCTGAAGAAGACGCGAATGTGTCTTTAGAACAACGT TCTCAGTGGGAGCGCTATTGGTTAGTTGATCCGCTTGATGGAACTCAAGAGTTTATTGCTCGTAGTGGTGATTTTGCTAC CATTATTGCATTGGTTGAAAATAACCGTCCTATTATGGGGGTTGTTTATGCGCCGGTTTCTGGTGTCACTTATTATGCTT ATGAAGGTAAAGGTGCATGGAAAATCCCTGATATGGATGAAAGTGTGCGAATTAGCACGCTTAAGCATGAAGAAGAGAAA CAGCCAATTGCGGTTGCGATAAGTCGTCGCCAAAACATTAATAACATTACTCGCTGTATGAGTTCTGAATGGAATTATGA TTTAGTGCCATTGGGATCCGCCGCCTTAAAAGCCTGTTTGGTTGCAGAAGGTGCTGTCGATTGTTATTTACGTTTGGGGC CAACAGGCGAGTGGGATACCGCAGCAACACAATGTATTGTTCAAGAAGCGGGTGGTCGTATATTATCAACCAAGCTTGAA CCACTGTCGTACAATGAACGAGAGTCGTTAGAGAACCCTAATTTTATTGTATTAGGTGACGAGAATCTTCCATGGGATTC TATTTTAACTTGTGAATAA
Upstream 100 bases:
>100_bases GTCAAGCGTCTGAATTACTTCATCATCTCGATTTTTCAGAAGCAAGGTGCATTAGTGCATTATTGCTTGCTCAACAATTT TTAGAAAAGGAGTGATATTG
Downstream 100 bases:
>100_bases TGAGCACCAATCTTGATAAATTGATTATTAAGATTGGTATAATTTCGGTTCGATACTCGAAATTCAGTGTTTTTCAGAGT ACAATCCTTAATCATACTAA
Product: protein CysQ
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MDSTFSHLLPDVIKIARASGQLILDIYEKGDFEAFIKADQTPVTSADLAAHKLIMEKLSQLTPDIPILSEEDANVSLEQR SQWERYWLVDPLDGTQEFIARSGDFATIIALVENNRPIMGVVYAPVSGVTYYAYEGKGAWKIPDMDESVRISTLKHEEEK QPIAVAISRRQNINNITRCMSSEWNYDLVPLGSAALKACLVAEGAVDCYLRLGPTGEWDTAATQCIVQEAGGRILSTKLE PLSYNERESLENPNFIVLGDENLPWDSILTCE
Sequences:
>Translated_272_residues MDSTFSHLLPDVIKIARASGQLILDIYEKGDFEAFIKADQTPVTSADLAAHKLIMEKLSQLTPDIPILSEEDANVSLEQR SQWERYWLVDPLDGTQEFIARSGDFATIIALVENNRPIMGVVYAPVSGVTYYAYEGKGAWKIPDMDESVRISTLKHEEEK QPIAVAISRRQNINNITRCMSSEWNYDLVPLGSAALKACLVAEGAVDCYLRLGPTGEWDTAATQCIVQEAGGRILSTKLE PLSYNERESLENPNFIVLGDENLPWDSILTCE >Mature_272_residues MDSTFSHLLPDVIKIARASGQLILDIYEKGDFEAFIKADQTPVTSADLAAHKLIMEKLSQLTPDIPILSEEDANVSLEQR SQWERYWLVDPLDGTQEFIARSGDFATIIALVENNRPIMGVVYAPVSGVTYYAYEGKGAWKIPDMDESVRISTLKHEEEK QPIAVAISRRQNINNITRCMSSEWNYDLVPLGSAALKACLVAEGAVDCYLRLGPTGEWDTAATQCIVQEAGGRILSTKLE PLSYNERESLENPNFIVLGDENLPWDSILTCE
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=255, Percent_Identity=25.0980392156863, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI221625487, Length=255, Percent_Identity=25.0980392156863, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI7657236, Length=207, Percent_Identity=26.5700483091787, Blast_Score=69, Evalue=4e-12, Organism=Escherichia coli, GI1790659, Length=251, Percent_Identity=43.8247011952191, Blast_Score=186, Evalue=2e-48, Organism=Escherichia coli, GI1788882, Length=235, Percent_Identity=33.1914893617021, Blast_Score=87, Evalue=8e-19, Organism=Caenorhabditis elegans, GI193202572, Length=250, Percent_Identity=27.6, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71995897, Length=281, Percent_Identity=24.5551601423488, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71995905, Length=281, Percent_Identity=24.5551601423488, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6320493, Length=199, Percent_Identity=27.6381909547739, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6321836, Length=206, Percent_Identity=28.1553398058252, Blast_Score=66, Evalue=6e-12, Organism=Drosophila melanogaster, GI24664922, Length=230, Percent_Identity=30, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI24664926, Length=232, Percent_Identity=27.1551724137931, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24641722, Length=274, Percent_Identity=24.4525547445255, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24664918, Length=272, Percent_Identity=23.5294117647059, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 30271; Mature: 30271
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSTFSHLLPDVIKIARASGQLILDIYEKGDFEAFIKADQTPVTSADLAAHKLIMEKLSQ CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH LTPDIPILSEEDANVSLEQRSQWERYWLVDPLDGTQEFIARSGDFATIIALVENNRPIMG HCCCCCEECCCCCCCCHHHHCCCCEEEEECCCCCHHHHHHCCCCEEEEEEEEECCCCEEE VVYAPVSGVTYYAYEGKGAWKIPDMDESVRISTLKHEEEKQPIAVAISRRQNINNITRCM EEEECCCCEEEEEECCCCCEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHH SSEWNYDLVPLGSAALKACLVAEGAVDCYLRLGPTGEWDTAATQCIVQEAGGRILSTKLE CCCCCEEEEECCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECC PLSYNERESLENPNFIVLGDENLPWDSILTCE CCCCCHHHCCCCCCEEEECCCCCCCCCEEECC >Mature Secondary Structure MDSTFSHLLPDVIKIARASGQLILDIYEKGDFEAFIKADQTPVTSADLAAHKLIMEKLSQ CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH LTPDIPILSEEDANVSLEQRSQWERYWLVDPLDGTQEFIARSGDFATIIALVENNRPIMG HCCCCCEECCCCCCCCHHHHCCCCEEEEECCCCCHHHHHHCCCCEEEEEEEEECCCCEEE VVYAPVSGVTYYAYEGKGAWKIPDMDESVRISTLKHEEEKQPIAVAISRRQNINNITRCM EEEECCCCEEEEEECCCCCEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHH SSEWNYDLVPLGSAALKACLVAEGAVDCYLRLGPTGEWDTAATQCIVQEAGGRILSTKLE CCCCCEEEEECCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECC PLSYNERESLENPNFIVLGDENLPWDSILTCE CCCCCHHHCCCCCCEEEECCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9020051 [H]