| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is ftsX [H]
Identifier: 209696300
GI number: 209696300
Start: 3147076
End: 3148029
Strand: Reverse
Name: ftsX [H]
Synonym: VSAL_I2901
Alternate gene names: 209696300
Gene position: 3148029-3147076 (Counterclockwise)
Preceding gene: 209696301
Following gene: 209696299
Centisome position: 94.67
GC content: 39.1
Gene sequence:
>954_bases ATGGCTAAGCGTAAAGCAAAAAATACTCAAGGCGCATCGAATGATGGATTTTGGGCTTCTCATAAAAAACAGGCAAGACT TTCTTTTCAAGAATTATTACGTCGCCCACTAGGTAACTTATTAACACTTGCTGTTATTGCTATGTCGCTAACTCTGCCTT CAACGATGTATTTGGTGGGTAAAAACTTAACGATTGTTGCTTCAAAATGGCAAGCACCTTCGCAAGTGAGCTTGTATTTA CAACAAAACGTAGCTGAATCAAAAGTGTTAGAATTAAAAACAGAATTGGATGGGTGGGAAGAGGTTGAAGCGATTCAATA CATTTCTCCACAAGAAGGGTTAAAAGAACTCAGTGAGCATTCTGGCTTTGAACAAGCCTTAACATTACTTGATAGTAATC CTTTGCCCGCAGTATTGATTGTTTCACCTAAAACGGAATGGCAAACGACAGAGAAAGTGAATCAGTTAGTGAGTCGTCTA AAACAGCAGTCTTATGTCAACGAAGTTCGCTTGGATGATGACTGGTTAATGCGTTTAGATGCCATTAAGCATGTTGCTGT CGTTGTAGCGACAACGTTAGCTGTTTTAATGTTTATTGCTGTCTTCCTTATTGTTGGTAATACATTGCGGTTTAATGTGT TGGAACAAAAAGATGAAATCCAGGTGATGAAGTTAGTGGGAGCAACAAATACCTTTATATTACGTCCTTATTTATACACT GGGATGTGGTTTGGTTTACTCGGTGGTTTTATTGCTTGGTTCTTAACGGCCATTATTACCGTGACTCTGAATGGTGCGGT CGATAATGTTGCTGTACTTTATGACAGCGTGTTCCGCTTGATCGGGTTAACATGGGATGAAAGTTTATTATTACTGATGC TGTCTTCCTTTTTAGGTTTATTGGCGGCAAGAATCTCGGTGTTACGTCATTTGAAAGAGATAGAGCCAGTATAA
Upstream 100 bases:
>100_bases GTGAGTGTATTAATGGCATCGCATGATTTGTCATTAATTGGTGGTAATAAATACCGTCGTTTTGATCTTCACCAAGGGTG TCTACGTGAGGTAGCTGAAC
Downstream 100 bases:
>100_bases GGATTTAAGTACTGTTTTTATCTGTTGTGATCCATTTCTTAAAAAGCCGTTAATTATCTGAATTAGCGGATTTTTTCTTT TTTGTTTATGAAAAACTGAA
Product: cell division protein FtsX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MAKRKAKNTQGASNDGFWASHKKQARLSFQELLRRPLGNLLTLAVIAMSLTLPSTMYLVGKNLTIVASKWQAPSQVSLYL QQNVAESKVLELKTELDGWEEVEAIQYISPQEGLKELSEHSGFEQALTLLDSNPLPAVLIVSPKTEWQTTEKVNQLVSRL KQQSYVNEVRLDDDWLMRLDAIKHVAVVVATTLAVLMFIAVFLIVGNTLRFNVLEQKDEIQVMKLVGATNTFILRPYLYT GMWFGLLGGFIAWFLTAIITVTLNGAVDNVAVLYDSVFRLIGLTWDESLLLLMLSSFLGLLAARISVLRHLKEIEPV
Sequences:
>Translated_317_residues MAKRKAKNTQGASNDGFWASHKKQARLSFQELLRRPLGNLLTLAVIAMSLTLPSTMYLVGKNLTIVASKWQAPSQVSLYL QQNVAESKVLELKTELDGWEEVEAIQYISPQEGLKELSEHSGFEQALTLLDSNPLPAVLIVSPKTEWQTTEKVNQLVSRL KQQSYVNEVRLDDDWLMRLDAIKHVAVVVATTLAVLMFIAVFLIVGNTLRFNVLEQKDEIQVMKLVGATNTFILRPYLYT GMWFGLLGGFIAWFLTAIITVTLNGAVDNVAVLYDSVFRLIGLTWDESLLLLMLSSFLGLLAARISVLRHLKEIEPV >Mature_316_residues AKRKAKNTQGASNDGFWASHKKQARLSFQELLRRPLGNLLTLAVIAMSLTLPSTMYLVGKNLTIVASKWQAPSQVSLYLQ QNVAESKVLELKTELDGWEEVEAIQYISPQEGLKELSEHSGFEQALTLLDSNPLPAVLIVSPKTEWQTTEKVNQLVSRLK QQSYVNEVRLDDDWLMRLDAIKHVAVVVATTLAVLMFIAVFLIVGNTLRFNVLEQKDEIQVMKLVGATNTFILRPYLYTG MWFGLLGGFIAWFLTAIITVTLNGAVDNVAVLYDSVFRLIGLTWDESLLLLMLSSFLGLLAARISVLRHLKEIEPV
Specific function: Not known. Is coded in an operon essential for cell division [H]
COG id: COG2177
COG function: function code D; Cell division protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family. FtsX subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789872, Length=299, Percent_Identity=38.7959866220736, Blast_Score=224, Evalue=8e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004513 - InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 35517; Mature: 35386
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRKAKNTQGASNDGFWASHKKQARLSFQELLRRPLGNLLTLAVIAMSLTLPSTMYLVG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEC KNLTIVASKWQAPSQVSLYLQQNVAESKVLELKTELDGWEEVEAIQYISPQEGLKELSEH CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHC SGFEQALTLLDSNPLPAVLIVSPKTEWQTTEKVNQLVSRLKQQSYVNEVRLDDDWLMRLD CCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AIKHVAVVVATTLAVLMFIAVFLIVGNTLRFNVLEQKDEIQVMKLVGATNTFILRPYLYT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCEEEHHHHHH GMWFGLLGGFIAWFLTAIITVTLNGAVDNVAVLYDSVFRLIGLTWDESLLLLMLSSFLGL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LAARISVLRHLKEIEPV HHHHHHHHHHHHHCCCC >Mature Secondary Structure AKRKAKNTQGASNDGFWASHKKQARLSFQELLRRPLGNLLTLAVIAMSLTLPSTMYLVG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEC KNLTIVASKWQAPSQVSLYLQQNVAESKVLELKTELDGWEEVEAIQYISPQEGLKELSEH CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHC SGFEQALTLLDSNPLPAVLIVSPKTEWQTTEKVNQLVSRLKQQSYVNEVRLDDDWLMRLD CCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AIKHVAVVVATTLAVLMFIAVFLIVGNTLRFNVLEQKDEIQVMKLVGATNTFILRPYLYT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCEEEHHHHHH GMWFGLLGGFIAWFLTAIITVTLNGAVDNVAVLYDSVFRLIGLTWDESLLLLMLSSFLGL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LAARISVLRHLKEIEPV HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]