| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is 209696291
Identifier: 209696291
GI number: 209696291
Start: 3138095
End: 3138907
Strand: Reverse
Name: 209696291
Synonym: VSAL_I2892
Alternate gene names: NA
Gene position: 3138907-3138095 (Counterclockwise)
Preceding gene: 209696292
Following gene: 209696290
Centisome position: 94.4
GC content: 41.33
Gene sequence:
>813_bases ATGGAGATGAAGATGAAGATGACAAATCTCGGCCACAAAATACCTTCCCATCTTTTACAGCCTATGTGGTTGAGAAGTAG AGAGAGCTTAATCGATAATGGTCTTATCTATGACCCTATCGCAGCGGCCGCATGTCAACATTGCCACCTTTCTTCTGAAT GCCTTTCTGGCGACATTGATCAAAAACAGCTATTGCATGCCACATTGACCGTTCAATGCGATCAGCAAGTTGCTCAATTT TTAAAACGTCATCCTTCGGGGTGGGTTGTTAATGTTGGCGCAGGTTTAGATACCCGTTTTTATCGTTTAGATAATGGTCT TTGTCATTGGTTAGAGTTAGACATTAATGAAAACTTACTGTGGCGACAGAAGCTTTTTCATACTAATGAGCGCTATTATG TTCGTTGTGGTTCTGCGATTGAACATGCATGGATCCATGATTTGCCCGTACCGAGTAATGTGCCTGTCATGATTGTTTGT GAGCAAGCGTTGTTAGAGTGTGATGAACTTCAATTAGCTAAGTTTATTCAATTATTAGGCCGTCGATTTCAACATGCTGA AGCAACGATTGTTATTGCGGCAGATAGGTGTCATACCCGCATGGGGAAAAAACTAGGTTGTGGTGATTATCAACATGGTT TATATCAACCTAAGCTTCACTTTACTGGTTGGCTTCCTTGGATTGACACGATTTCAATTAAATCGCCTTTTGAACACAAT TGTTCTCGCTGGAAATTATGGCAGCGCTGGTTAGCGAAATTTCCTCTGTTTAAGCACCGGGTGACTCCATTACTTGTGCA TATGAATTGGTAA
Upstream 100 bases:
>100_bases TTGGATGTAATTTATTTTCACTCTTAATTATCTTCTGTAAGGCAGTAAATAGTGCTTTACAATTGGTAATGATAGTCATT ATCATCTCTGTTGTTTATCA
Downstream 100 bases:
>100_bases AACGAAGCTTAAATTTGAAAAATTTTTGTATTGAGTCGAAGTAAGTAATAATGCCGTCACTTTCTTTGTTGAGTACAAAT CTATGTGGCAAGTCTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Tetracenomycin C Synthesis Protein; O-Methyltransferase Domain-Containing Protein; Polyketide Methyltransferase; O-Methyltransferase-Like Protein; O-Methyltransferase; O-Methyltransferase Involved In Polyketide Biosynthesis; O-Methyltransferase-Related Protein; Polyketide Biosynthesis O-Methyltransferase; O-Methyltransferase-Relateprotein
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MEMKMKMTNLGHKIPSHLLQPMWLRSRESLIDNGLIYDPIAAAACQHCHLSSECLSGDIDQKQLLHATLTVQCDQQVAQF LKRHPSGWVVNVGAGLDTRFYRLDNGLCHWLELDINENLLWRQKLFHTNERYYVRCGSAIEHAWIHDLPVPSNVPVMIVC EQALLECDELQLAKFIQLLGRRFQHAEATIVIAADRCHTRMGKKLGCGDYQHGLYQPKLHFTGWLPWIDTISIKSPFEHN CSRWKLWQRWLAKFPLFKHRVTPLLVHMNW
Sequences:
>Translated_270_residues MEMKMKMTNLGHKIPSHLLQPMWLRSRESLIDNGLIYDPIAAAACQHCHLSSECLSGDIDQKQLLHATLTVQCDQQVAQF LKRHPSGWVVNVGAGLDTRFYRLDNGLCHWLELDINENLLWRQKLFHTNERYYVRCGSAIEHAWIHDLPVPSNVPVMIVC EQALLECDELQLAKFIQLLGRRFQHAEATIVIAADRCHTRMGKKLGCGDYQHGLYQPKLHFTGWLPWIDTISIKSPFEHN CSRWKLWQRWLAKFPLFKHRVTPLLVHMNW >Mature_270_residues MEMKMKMTNLGHKIPSHLLQPMWLRSRESLIDNGLIYDPIAAAACQHCHLSSECLSGDIDQKQLLHATLTVQCDQQVAQF LKRHPSGWVVNVGAGLDTRFYRLDNGLCHWLELDINENLLWRQKLFHTNERYYVRCGSAIEHAWIHDLPVPSNVPVMIVC EQALLECDELQLAKFIQLLGRRFQHAEATIVIAADRCHTRMGKKLGCGDYQHGLYQPKLHFTGWLPWIDTISIKSPFEHN CSRWKLWQRWLAKFPLFKHRVTPLLVHMNW
Specific function: Unknown
COG id: COG3315
COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31477; Mature: 31477
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMKMKMTNLGHKIPSHLLQPMWLRSRESLIDNGLIYDPIAAAACQHCHLSSECLSGDID CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHCCCCHHHHCCCCC QKQLLHATLTVQCDQQVAQFLKRHPSGWVVNVGAGLDTRFYRLDNGLCHWLELDINENLL HHHHHHHHEEEEEHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCEEEEEEECCCCHH WRQKLFHTNERYYVRCGSAIEHAWIHDLPVPSNVPVMIVCEQALLECDELQLAKFIQLLG HHHHHHCCCCEEEEEECCHHHHHHHCCCCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHH RRFQHAEATIVIAADRCHTRMGKKLGCGDYQHGLYQPKLHFTGWLPWIDTISIKSPFEHN HHHCCCCEEEEEEECHHHHHHCCCCCCCCHHCCCCCCCEEEEEECCCCEEEECCCCHHHC CSRWKLWQRWLAKFPLFKHRVTPLLVHMNW CHHHHHHHHHHHHCCHHHHCCCEEEEEECC >Mature Secondary Structure MEMKMKMTNLGHKIPSHLLQPMWLRSRESLIDNGLIYDPIAAAACQHCHLSSECLSGDID CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHCCCCHHHHCCCCC QKQLLHATLTVQCDQQVAQFLKRHPSGWVVNVGAGLDTRFYRLDNGLCHWLELDINENLL HHHHHHHHEEEEEHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCEEEEEEECCCCHH WRQKLFHTNERYYVRCGSAIEHAWIHDLPVPSNVPVMIVCEQALLECDELQLAKFIQLLG HHHHHHCCCCEEEEEECCHHHHHHHCCCCCCCCCCEEEEECHHHHCCHHHHHHHHHHHHH RRFQHAEATIVIAADRCHTRMGKKLGCGDYQHGLYQPKLHFTGWLPWIDTISIKSPFEHN HHHCCCCEEEEEEECHHHHHHCCCCCCCCHHCCCCCCCEEEEEECCCCEEEECCCCHHHC CSRWKLWQRWLAKFPLFKHRVTPLLVHMNW CHHHHHHHHHHHHCCHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA