| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is murB [H]
Identifier: 209696276
GI number: 209696276
Start: 3117192
End: 3118232
Strand: Reverse
Name: murB [H]
Synonym: VSAL_I2877
Alternate gene names: 209696276
Gene position: 3118232-3117192 (Counterclockwise)
Preceding gene: 209696283
Following gene: 209696275
Centisome position: 93.78
GC content: 33.43
Gene sequence:
>1041_bases ATGAATATTTTATTAAATAAAAATCTTCGCCCTTTTAATAGTTTTTCTATTGACGTTAATGCGGATGTTATTATCGAAGC AAATTCAATAAATGATTTTATTGATATATGGTCAAATGACGATTATCGCTCATCGATTAAGTTACCATTAGGGCGAGGCA GTAACACTTTATTTTGTAATGATTTTTCTGGTGTTATTGTACTTAACCGAATTTTGGGTAAAGAAGTAACGGAAACAGAA ACTGATTATTTATTATCTGTTTCAAGCGGCGAAGATTGGCCTAGTTTTGTTAAGTGGTGTGTAGAGCATAATTACAATGG TATTGAAAATCTTGCAATGATCCCTGGTTGTGTAGGATCTGCTCCTATTCAAAATATTGGTGCATACGGTTTAGAGTTTA AAGATGTTTGTGATTATGTTGAGTATTTAGATTTAGAATCATTGAACATTAAACGTTTATCAAAAAGTGAATGTGATTTT GGTTATAGAGATTCAATTTTCAAGAAATCATTAAAAGATAAAGTAATCATTACATCTGTCGGTTTTAAATTATCAAAATC GTGGGCCCCACTTTTGACGTATGGGCCGCTTGCTGATTTAAGTAGTGTGGTAGGAGTAACCGCTGAATCTGTATTTAAAG CTATTTGTGATATTCGCTCTCTTAAATTACCCAATCCTGAAGTGCTTGGGAATGCCGGTAGTTTTTTTAAAAATCCTATC GTATCAGATGAATGTTATTTAAAACTATCGAAAAATTTTCCTACTCTGCCTGCATATACCGTCTCTGATGGAAAGAAAAT ATCTGCAGGTTGGTTGATAGATCACGCGGGACTTAAAGGTTTCTCGATTAACGATGCCCAAGTGCATAAAGAACAAGCTC TTGTACTAATCAACAATGGAAATGCAACATCGAAAGATATTTTAGAGTTAGCTCGCCATGTTCAAAAAACAATTTTTGAT ATTTATCATATAGAGTTGGAACATGAAGTTCGATTTTATTTTTCGGGCAAAGAAACGTCACTCTCGGAGTTGTTTGAATG A
Upstream 100 bases:
>100_bases TTGTTTAAGTGAGAAACAGTAAGATTCATTCGTTGGATTCTATGTAGATTGTATTCATTGCGTTAGAATGTACTTAATCT AACCTATGAAATAAAGTGAT
Downstream 100 bases:
>100_bases AGGAACACTTGAAAAAGCTAGAAATATTGAAGGCGCTCAGTGATGGTTCTTTTCATTCAGGTGAGGACTTAGGTGATGAC ATTGGCGTATCCAGAGCTGC
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase [H]
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MNILLNKNLRPFNSFSIDVNADVIIEANSINDFIDIWSNDDYRSSIKLPLGRGSNTLFCNDFSGVIVLNRILGKEVTETE TDYLLSVSSGEDWPSFVKWCVEHNYNGIENLAMIPGCVGSAPIQNIGAYGLEFKDVCDYVEYLDLESLNIKRLSKSECDF GYRDSIFKKSLKDKVIITSVGFKLSKSWAPLLTYGPLADLSSVVGVTAESVFKAICDIRSLKLPNPEVLGNAGSFFKNPI VSDECYLKLSKNFPTLPAYTVSDGKKISAGWLIDHAGLKGFSINDAQVHKEQALVLINNGNATSKDILELARHVQKTIFD IYHIELEHEVRFYFSGKETSLSELFE
Sequences:
>Translated_346_residues MNILLNKNLRPFNSFSIDVNADVIIEANSINDFIDIWSNDDYRSSIKLPLGRGSNTLFCNDFSGVIVLNRILGKEVTETE TDYLLSVSSGEDWPSFVKWCVEHNYNGIENLAMIPGCVGSAPIQNIGAYGLEFKDVCDYVEYLDLESLNIKRLSKSECDF GYRDSIFKKSLKDKVIITSVGFKLSKSWAPLLTYGPLADLSSVVGVTAESVFKAICDIRSLKLPNPEVLGNAGSFFKNPI VSDECYLKLSKNFPTLPAYTVSDGKKISAGWLIDHAGLKGFSINDAQVHKEQALVLINNGNATSKDILELARHVQKTIFD IYHIELEHEVRFYFSGKETSLSELFE >Mature_346_residues MNILLNKNLRPFNSFSIDVNADVIIEANSINDFIDIWSNDDYRSSIKLPLGRGSNTLFCNDFSGVIVLNRILGKEVTETE TDYLLSVSSGEDWPSFVKWCVEHNYNGIENLAMIPGCVGSAPIQNIGAYGLEFKDVCDYVEYLDLESLNIKRLSKSECDF GYRDSIFKKSLKDKVIITSVGFKLSKSWAPLLTYGPLADLSSVVGVTAESVFKAICDIRSLKLPNPEVLGNAGSFFKNPI VSDECYLKLSKNFPTLPAYTVSDGKKISAGWLIDHAGLKGFSINDAQVHKEQALVLINNGNATSKDILELARHVQKTIFD IYHIELEHEVRFYFSGKETSLSELFE
Specific function: Cell wall formation [H]
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790407, Length=340, Percent_Identity=46.7647058823529, Blast_Score=327, Evalue=9e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 [H]
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C [H]
EC number: =1.1.1.158 [H]
Molecular weight: Translated: 38597; Mature: 38597
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILLNKNLRPFNSFSIDVNADVIIEANSINDFIDIWSNDDYRSSIKLPLGRGSNTLFCN CEEEECCCCCCCCCEEEECCCEEEEEECCCCCHHHHCCCCCCCCEEEEEECCCCCEEEEE DFSGVIVLNRILGKEVTETETDYLLSVSSGEDWPSFVKWCVEHNYNGIENLAMIPGCVGS CCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCC APIQNIGAYGLEFKDVCDYVEYLDLESLNIKRLSKSECDFGYRDSIFKKSLKDKVIITSV CCHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEC GFKLSKSWAPLLTYGPLADLSSVVGVTAESVFKAICDIRSLKLPNPEVLGNAGSFFKNPI CCEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHCCCC VSDECYLKLSKNFPTLPAYTVSDGKKISAGWLIDHAGLKGFSINDAQVHKEQALVLINNG CCCCEEEEECCCCCCCCEEECCCCCEEECCEEEECCCCCCCCCCHHHCCCCCEEEEEECC NATSKDILELARHVQKTIFDIYHIELEHEVRFYFSGKETSLSELFE CCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCHHHHCC >Mature Secondary Structure MNILLNKNLRPFNSFSIDVNADVIIEANSINDFIDIWSNDDYRSSIKLPLGRGSNTLFCN CEEEECCCCCCCCCEEEECCCEEEEEECCCCCHHHHCCCCCCCCEEEEEECCCCCEEEEE DFSGVIVLNRILGKEVTETETDYLLSVSSGEDWPSFVKWCVEHNYNGIENLAMIPGCVGS CCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCC APIQNIGAYGLEFKDVCDYVEYLDLESLNIKRLSKSECDFGYRDSIFKKSLKDKVIITSV CCHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEC GFKLSKSWAPLLTYGPLADLSSVVGVTAESVFKAICDIRSLKLPNPEVLGNAGSFFKNPI CCEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHCCCC VSDECYLKLSKNFPTLPAYTVSDGKKISAGWLIDHAGLKGFSINDAQVHKEQALVLINNG CCCCEEEEECCCCCCCCEEECCCCCEEECCEEEECCCCCCCCCCHHHCCCCCEEEEEECC NATSKDILELARHVQKTIFDIYHIELEHEVRFYFSGKETSLSELFE CCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA