| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is acs [H]
Identifier: 209696237
GI number: 209696237
Start: 3071562
End: 3073511
Strand: Direct
Name: acs [H]
Synonym: VSAL_I2833
Alternate gene names: 209696237
Gene position: 3071562-3073511 (Clockwise)
Preceding gene: 209696236
Following gene: 209696238
Centisome position: 92.37
GC content: 45.49
Gene sequence:
>1950_bases ATGAGTGACATTCACGTATACCCAGTCAATCAAGACATCGCAAAAAATGCACATGCCGATGAAGATAAATACCGTGAAAT GTATCAGCAATCCGTCATCAATCCCGAAGGGTTTTGGCGTGAGCACGGACAAATAGTCGACTGGATGACTCCTTATACTA AAGTGAAAAACACCTCGTTCGATACTGGTCACGTAGACATCAAATGGTTTGAAGATGGTGAATTGAATGTCTCTGCAAAC TGTATCGATCGCCATCTTGCTGCTCGCGGTGATGAAGTCGCGATCATCTGGGAAGGTGACGATCCACAAGATGATGCATC AATTACCTTCAATGAGCTGCACGAACAAGTGTGTAAATTCTCAAACGCACTTAAGAGTCAAGGCGTTCGCAAAGGCGATG TTGTGTGTATTTACATGCCAATGGTTGCAGAAGCAGCCATTGCAATGCTTGCTTGTACTCGCATTGGTGCGGTTCATACC GTTGTTTTTGGTGGGTTCTCACCAGAAGCATTGGCGGGTCGAATCGTTGATTCAGATGCGAAAGTCGTGATTACCGCCGA TGAAGGCGTTCGTGGCGGTCGTACCGTACCTCTAAAGAAAAACGTCGACGATGCATTAAATAACCCTGAAGTAACAACCA TTGAAAAAGTCGTTGTATTCCAACGCACCGGTAATGATATTGATTGGAATGAAGAACGCGATGTATGGTGGCATGAAGCA ACCGCTGTAGCTTCTGCGCATTGTGAACCAGAAGCCATGAATGCGGAAGATCCTCTTTTCATTCTTTATACCTCAGGCTC AACAGGTAAACCAAAAGGCGTATTACACACCACTGGCGGCTACCTTGTTTATGCAGCAATGACCTTCAAATACATCTTTG ATTACCAAGAAGGTGAGGTGTTCTGGTGTACCGCTGATGTAGGTTGGATCACTGGCCATACTTATTTAATCTACGGACCT CTCGCTAATGGCGCAAAAACCATTCTGTTTGAAGGGGTACCAAACTACCCAAGCACTAGCCGCATGAGTGAAGTGGTCGA TAAGCACAACGTAAATATTCTTTATACTGCGCCAACAGCCATTCGAGCACTCATGGCTCACGGTAATGACGCTGTAGAAG GGACCTCAAGATCCTCATTACGCGTGATGGGATCCGTCGGCGAACCGATCAACCCTGAAGCATGGGAGTGGTATTACAAC ACCATTGGTGACGCTCGCTGCCCAATCGTTGATACGTGGTGGCAAACCGAAACGGGCGGGATTTTAATCTCTCCTCTTCC TGGTGCAACGGCTTTAAAACCGGGCTCGGCAACACGTCCTTTCTTTGGTGTTCAACCAGCTTTGGTTGATAACATGGGTA ACCTTATTGAAGGTGCTGCCGATGGAAACCTCGTGATTACCGATTCATGGCCGGGTCAAATGCGCACCATTTATGGCGAT CACGACCGTTTCGAACAAACTTATTTTTCAACGTTTAAAGGCATGTATTTTACCAGTGATGGTGCTCGACGTGATGAAGA TGGTTATTACTGGATAACAGGTCGTGTTGATGATGTGCTCAATGTGTCTGGTCACCGAATGGGTACCGCTGAAGTTGAAT CCGCCTTAGTTTCTTTCAGTAAAATTGCAGAGGCTGCCATTGTCGGTGTTCCTCATGATATTAAAGGCCAAGCGATTTAC GCATACATCACCTTAAATTCGGGCGAATACCCAAGTGCTGAGCTCCATAAAGAAGTCAAAGATTGGGTAAGAAAAGAAAT AGGCCCTATCGCAACACCTGATTTCTTGCATTGGACCGACTCATTACCAAAAACACGTTCAGGGAAAATAATGCGTCGAA TTCTTCGTAAAATTGCGACGGGAGATACTTCAAATCTAGGCGATACATCCACACTTGCCGACCCTAGCGTGGTTAATAAA CTAATTGAAGAACAAAGAAAAATTGCTTAA
Upstream 100 bases:
>100_bases TAGCAGAAAGTAATATCAACGAAGCGCAGAACCAATGAAGGGGCTGCCATAAAATCCAGTCATAAATTGGATATTTGCTG TATTCACAAGGAGAATCAAC
Downstream 100 bases:
>100_bases CTGAATAGATTTAACAACATAACGGGCTAGAGCAAAAACTCAAACCGAATGAAAAAGTCGCTATTATTCGTAATAGCGAC TTTTTTCTTGTGATTTCAAG
Product: acetyl-CoA synthetase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme [H]
Number of amino acids: Translated: 649; Mature: 648
Protein sequence:
>649_residues MSDIHVYPVNQDIAKNAHADEDKYREMYQQSVINPEGFWREHGQIVDWMTPYTKVKNTSFDTGHVDIKWFEDGELNVSAN CIDRHLAARGDEVAIIWEGDDPQDDASITFNELHEQVCKFSNALKSQGVRKGDVVCIYMPMVAEAAIAMLACTRIGAVHT VVFGGFSPEALAGRIVDSDAKVVITADEGVRGGRTVPLKKNVDDALNNPEVTTIEKVVVFQRTGNDIDWNEERDVWWHEA TAVASAHCEPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTFKYIFDYQEGEVFWCTADVGWITGHTYLIYGP LANGAKTILFEGVPNYPSTSRMSEVVDKHNVNILYTAPTAIRALMAHGNDAVEGTSRSSLRVMGSVGEPINPEAWEWYYN TIGDARCPIVDTWWQTETGGILISPLPGATALKPGSATRPFFGVQPALVDNMGNLIEGAADGNLVITDSWPGQMRTIYGD HDRFEQTYFSTFKGMYFTSDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEVESALVSFSKIAEAAIVGVPHDIKGQAIY AYITLNSGEYPSAELHKEVKDWVRKEIGPIATPDFLHWTDSLPKTRSGKIMRRILRKIATGDTSNLGDTSTLADPSVVNK LIEEQRKIA
Sequences:
>Translated_649_residues MSDIHVYPVNQDIAKNAHADEDKYREMYQQSVINPEGFWREHGQIVDWMTPYTKVKNTSFDTGHVDIKWFEDGELNVSAN CIDRHLAARGDEVAIIWEGDDPQDDASITFNELHEQVCKFSNALKSQGVRKGDVVCIYMPMVAEAAIAMLACTRIGAVHT VVFGGFSPEALAGRIVDSDAKVVITADEGVRGGRTVPLKKNVDDALNNPEVTTIEKVVVFQRTGNDIDWNEERDVWWHEA TAVASAHCEPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTFKYIFDYQEGEVFWCTADVGWITGHTYLIYGP LANGAKTILFEGVPNYPSTSRMSEVVDKHNVNILYTAPTAIRALMAHGNDAVEGTSRSSLRVMGSVGEPINPEAWEWYYN TIGDARCPIVDTWWQTETGGILISPLPGATALKPGSATRPFFGVQPALVDNMGNLIEGAADGNLVITDSWPGQMRTIYGD HDRFEQTYFSTFKGMYFTSDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEVESALVSFSKIAEAAIVGVPHDIKGQAIY AYITLNSGEYPSAELHKEVKDWVRKEIGPIATPDFLHWTDSLPKTRSGKIMRRILRKIATGDTSNLGDTSTLADPSVVNK LIEEQRKIA >Mature_648_residues SDIHVYPVNQDIAKNAHADEDKYREMYQQSVINPEGFWREHGQIVDWMTPYTKVKNTSFDTGHVDIKWFEDGELNVSANC IDRHLAARGDEVAIIWEGDDPQDDASITFNELHEQVCKFSNALKSQGVRKGDVVCIYMPMVAEAAIAMLACTRIGAVHTV VFGGFSPEALAGRIVDSDAKVVITADEGVRGGRTVPLKKNVDDALNNPEVTTIEKVVVFQRTGNDIDWNEERDVWWHEAT AVASAHCEPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTFKYIFDYQEGEVFWCTADVGWITGHTYLIYGPL ANGAKTILFEGVPNYPSTSRMSEVVDKHNVNILYTAPTAIRALMAHGNDAVEGTSRSSLRVMGSVGEPINPEAWEWYYNT IGDARCPIVDTWWQTETGGILISPLPGATALKPGSATRPFFGVQPALVDNMGNLIEGAADGNLVITDSWPGQMRTIYGDH DRFEQTYFSTFKGMYFTSDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEVESALVSFSKIAEAAIVGVPHDIKGQAIYA YITLNSGEYPSAELHKEVKDWVRKEIGPIATPDFLHWTDSLPKTRSGKIMRRILRKIATGDTSNLGDTSTLADPSVVNKL IEEQRKIA
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI8923896, Length=664, Percent_Identity=51.6566265060241, Blast_Score=699, Evalue=0.0, Organism=Homo sapiens, GI253970489, Length=677, Percent_Identity=50.6646971935007, Blast_Score=694, Evalue=0.0, Organism=Homo sapiens, GI28416953, Length=629, Percent_Identity=50.3974562798092, Blast_Score=644, Evalue=0.0, Organism=Homo sapiens, GI13375727, Length=640, Percent_Identity=36.40625, Blast_Score=398, Evalue=1e-111, Organism=Homo sapiens, GI42544132, Length=544, Percent_Identity=28.6764705882353, Blast_Score=188, Evalue=2e-47, Organism=Homo sapiens, GI31982927, Length=623, Percent_Identity=24.8796147672552, Blast_Score=183, Evalue=4e-46, Organism=Homo sapiens, GI38505220, Length=518, Percent_Identity=29.1505791505791, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI122937307, Length=525, Percent_Identity=25.9047619047619, Blast_Score=173, Evalue=5e-43, Organism=Homo sapiens, GI115511026, Length=545, Percent_Identity=26.7889908256881, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI58082049, Length=516, Percent_Identity=25.5813953488372, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI157311624, Length=516, Percent_Identity=24.8062015503876, Blast_Score=135, Evalue=2e-31, Organism=Homo sapiens, GI157311622, Length=516, Percent_Identity=24.8062015503876, Blast_Score=135, Evalue=2e-31, Organism=Homo sapiens, GI187761345, Length=389, Percent_Identity=25.706940874036, Blast_Score=106, Evalue=6e-23, Organism=Homo sapiens, GI187761343, Length=389, Percent_Identity=25.706940874036, Blast_Score=106, Evalue=6e-23, Organism=Homo sapiens, GI195947378, Length=401, Percent_Identity=26.4339152119701, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI42544134, Length=362, Percent_Identity=25.9668508287293, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI156151445, Length=543, Percent_Identity=22.0994475138122, Blast_Score=84, Evalue=5e-16, Organism=Escherichia coli, GI1790505, Length=649, Percent_Identity=72.1109399075501, Blast_Score=1021, Evalue=0.0, Organism=Escherichia coli, GI1786529, Length=639, Percent_Identity=35.8372456964006, Blast_Score=395, Evalue=1e-111, Organism=Escherichia coli, GI1788107, Length=580, Percent_Identity=22.4137931034483, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI221142682, Length=515, Percent_Identity=21.5533980582524, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI145693145, Length=125, Percent_Identity=33.6, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71983001, Length=646, Percent_Identity=50.6191950464396, Blast_Score=648, Evalue=0.0, Organism=Caenorhabditis elegans, GI71982997, Length=656, Percent_Identity=50.3048780487805, Blast_Score=647, Evalue=0.0, Organism=Caenorhabditis elegans, GI17569507, Length=635, Percent_Identity=20.7874015748031, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI17559526, Length=574, Percent_Identity=23.3449477351916, Blast_Score=97, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17558820, Length=520, Percent_Identity=22.5, Blast_Score=96, Evalue=5e-20, Organism=Caenorhabditis elegans, GI32563687, Length=514, Percent_Identity=22.568093385214, Blast_Score=88, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17538037, Length=137, Percent_Identity=31.3868613138686, Blast_Score=77, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17557194, Length=170, Percent_Identity=26.4705882352941, Blast_Score=74, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323182, Length=654, Percent_Identity=48.0122324159021, Blast_Score=629, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6319264, Length=636, Percent_Identity=47.0125786163522, Blast_Score=587, Evalue=1e-168, Organism=Saccharomyces cerevisiae, GI6319699, Length=382, Percent_Identity=23.8219895287958, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24667955, Length=657, Percent_Identity=52.8158295281583, Blast_Score=701, Evalue=0.0, Organism=Drosophila melanogaster, GI62472339, Length=559, Percent_Identity=56.5295169946333, Blast_Score=648, Evalue=0.0, Organism=Drosophila melanogaster, GI24667959, Length=517, Percent_Identity=57.0599613152805, Blast_Score=606, Evalue=1e-173, Organism=Drosophila melanogaster, GI21355225, Length=647, Percent_Identity=34.7758887171561, Blast_Score=377, Evalue=1e-104, Organism=Drosophila melanogaster, GI18859661, Length=548, Percent_Identity=25, Blast_Score=112, Evalue=9e-25, Organism=Drosophila melanogaster, GI24656500, Length=538, Percent_Identity=23.7918215613383, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI21355181, Length=519, Percent_Identity=22.1579961464355, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24581924, Length=524, Percent_Identity=20.2290076335878, Blast_Score=75, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.1 [H]
Molecular weight: Translated: 71758; Mature: 71627
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIHVYPVNQDIAKNAHADEDKYREMYQQSVINPEGFWREHGQIVDWMTPYTKVKNTSF CCCEEEEECCHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHCCCEEECCCCCHHHCCCCC DTGHVDIKWFEDGELNVSANCIDRHLAARGDEVAIIWEGDDPQDDASITFNELHEQVCKF CCCEEEEEEECCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHH SNALKSQGVRKGDVVCIYMPMVAEAAIAMLACTRIGAVHTVVFGGFSPEALAGRIVDSDA HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHCEEECCCC KVVITADEGVRGGRTVPLKKNVDDALNNPEVTTIEKVVVFQRTGNDIDWNEERDVWWHEA EEEEECCCCCCCCEEECCCCCHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEHH TAVASAHCEPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTFKYIFDYQEGEV HHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEHEEEEEEEEEECCCCE FWCTADVGWITGHTYLIYGPLANGAKTILFEGVPNYPSTSRMSEVVDKHNVNILYTAPTA EEEECCCCEEECCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECHHH IRALMAHGNDAVEGTSRSSLRVMGSVGEPINPEAWEWYYNTIGDARCPIVDTWWQTETGG HHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCCCCC ILISPLPGATALKPGSATRPFFGVQPALVDNMGNLIEGAADGNLVITDSWPGQMRTIYGD EEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECC HDRFEQTYFSTFKGMYFTSDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEVESALVSFS HHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHH KIAEAAIVGVPHDIKGQAIYAYITLNSGEYPSAELHKEVKDWVRKEIGPIATPDFLHWTD HHHHHHEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCC SLPKTRSGKIMRRILRKIATGDTSNLGDTSTLADPSVVNKLIEEQRKIA CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SDIHVYPVNQDIAKNAHADEDKYREMYQQSVINPEGFWREHGQIVDWMTPYTKVKNTSF CCEEEEECCHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHCCCEEECCCCCHHHCCCCC DTGHVDIKWFEDGELNVSANCIDRHLAARGDEVAIIWEGDDPQDDASITFNELHEQVCKF CCCEEEEEEECCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHH SNALKSQGVRKGDVVCIYMPMVAEAAIAMLACTRIGAVHTVVFGGFSPEALAGRIVDSDA HHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHCEEECCCC KVVITADEGVRGGRTVPLKKNVDDALNNPEVTTIEKVVVFQRTGNDIDWNEERDVWWHEA EEEEECCCCCCCCEEECCCCCHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEHH TAVASAHCEPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTFKYIFDYQEGEV HHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEHEEEEEEEEEECCCCE FWCTADVGWITGHTYLIYGPLANGAKTILFEGVPNYPSTSRMSEVVDKHNVNILYTAPTA EEEECCCCEEECCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECHHH IRALMAHGNDAVEGTSRSSLRVMGSVGEPINPEAWEWYYNTIGDARCPIVDTWWQTETGG HHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCEEECCCCCCCCC ILISPLPGATALKPGSATRPFFGVQPALVDNMGNLIEGAADGNLVITDSWPGQMRTIYGD EEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECC HDRFEQTYFSTFKGMYFTSDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEVESALVSFS HHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHH KIAEAAIVGVPHDIKGQAIYAYITLNSGEYPSAELHKEVKDWVRKEIGPIATPDFLHWTD HHHHHHEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCC SLPKTRSGKIMRRILRKIATGDTSNLGDTSTLADPSVVNKLIEEQRKIA CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA