Click here to switch to the map view.

The map label for this gene is hslV [H]

Identifier: 209696146

GI number: 209696146

Start: 2965816

End: 2966346

Strand: Reverse

Name: hslV [H]

Synonym: VSAL_I2740

Alternate gene names: 209696146

Gene position: 2966346-2965816 (Counterclockwise)

Preceding gene: 209696147

Following gene: 209696145

Centisome position: 89.21

GC content: 42.0

Gene sequence:

>531_bases
GTGACTACAATTGTTTCTGTTCGCCGTGAAGGCAAAGTCGTTATTGCTGGTGATGGCCAAGCATCTCAAGGCGATATGAT
CGCTAAAGGCAACGTAAAAAAAGTTCGTCGTTTATATAACGATTCTGTACTCGTTGGATTCGCAGGCAGCACCGCAGATG
CCTTCATTTTGTTCGACCTATGTGAACGAAAATTAGAAATGCACCAAGGTAATTTAACGAAAGCCGCCGTTGAACTAGCA
AAAGATTGGCGTAGTGATCGTAATTTACGTCGTCTTGAAGCCATGCTAATTGTTGCCGATGACACTACCTCACTGATCAT
CAGTGGTACTGGTGACTTAATCAATGCAGATAATGACCTCCTCACTATTGGTTCTGGTGGTTATTTTGCTCGTTCTGCGG
CAACCGCATTATTAGAAAATACAGATTTAGATGCATACGATATTGCAGTGAAAGCACTGACTATCGCTGGTGATACTGAT
GTATACACCAATCATAACCATACCGTTGAAGTTCTTGATACCAACAAATAG

Upstream 100 bases:

>100_bases
CTTGAAAACCGCAATCCCTCCCCCCATTACATAAGTAATAATCATGAAGAAGACAGTTATTGAATAAAGTAACTACTTCA
TCGAATAAGAGGTTTTACTC

Downstream 100 bases:

>100_bases
TAAGGAATACCCATGTCTGAAATGACTCCTCGTGAAATTGTACACGAATTAGATAGCCATATTATTGGTCAAGATAAAGC
AAAACGATCAGTCGCCATTG

Product: ATP-dependent protease peptidase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MTTIVSVRREGKVVIAGDGQASQGDMIAKGNVKKVRRLYNDSVLVGFAGSTADAFILFDLCERKLEMHQGNLTKAAVELA
KDWRSDRNLRRLEAMLIVADDTTSLIISGTGDLINADNDLLTIGSGGYFARSAATALLENTDLDAYDIAVKALTIAGDTD
VYTNHNHTVEVLDTNK

Sequences:

>Translated_176_residues
MTTIVSVRREGKVVIAGDGQASQGDMIAKGNVKKVRRLYNDSVLVGFAGSTADAFILFDLCERKLEMHQGNLTKAAVELA
KDWRSDRNLRRLEAMLIVADDTTSLIISGTGDLINADNDLLTIGSGGYFARSAATALLENTDLDAYDIAVKALTIAGDTD
VYTNHNHTVEVLDTNK
>Mature_175_residues
TTIVSVRREGKVVIAGDGQASQGDMIAKGNVKKVRRLYNDSVLVGFAGSTADAFILFDLCERKLEMHQGNLTKAAVELAK
DWRSDRNLRRLEAMLIVADDTTSLIISGTGDLINADNDLLTIGSGGYFARSAATALLENTDLDAYDIAVKALTIAGDTDV
YTNHNHTVEVLDTNK

Specific function: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery [H]

COG id: COG5405

COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase T1B family. HslV subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790367, Length=172, Percent_Identity=70.9302325581395, Blast_Score=250, Evalue=5e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022281
- InterPro:   IPR001353 [H]

Pfam domain/function: PF00227 Proteasome [H]

EC number: 3.4.25.-

Molecular weight: Translated: 19005; Mature: 18873

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIVSVRREGKVVIAGDGQASQGDMIAKGNVKKVRRLYNDSVLVGFAGSTADAFILFDL
CCEEEEECCCCEEEEEECCCCCCCCEEECCCHHHHHHHHCCCEEEEECCCCCCHHHHHHH
CERKLEMHQGNLTKAAVELAKDWRSDRNLRRLEAMLIVADDTTSLIISGTGDLINADNDL
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEECCCCEEECCCCE
LTIGSGGYFARSAATALLENTDLDAYDIAVKALTIAGDTDVYTNHNHTVEVLDTNK
EEECCCCCHHHHHHHHHHCCCCCCHHEEEEEEEEEECCCCEEECCCCEEEEEECCC
>Mature Secondary Structure 
TTIVSVRREGKVVIAGDGQASQGDMIAKGNVKKVRRLYNDSVLVGFAGSTADAFILFDL
CEEEEECCCCEEEEEECCCCCCCCEEECCCHHHHHHHHCCCEEEEECCCCCCHHHHHHH
CERKLEMHQGNLTKAAVELAKDWRSDRNLRRLEAMLIVADDTTSLIISGTGDLINADNDL
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEECCCCEEECCCCE
LTIGSGGYFARSAATALLENTDLDAYDIAVKALTIAGDTDVYTNHNHTVEVLDTNK
EEECCCCCHHHHHHHHHHCCCCCCHHEEEEEEEEEECCCCEEECCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA