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The map label for this gene is ygiF [H]

Identifier: 209696088

GI number: 209696088

Start: 2902179

End: 2903696

Strand: Reverse

Name: ygiF [H]

Synonym: VSAL_I2680

Alternate gene names: 209696088

Gene position: 2903696-2902179 (Counterclockwise)

Preceding gene: 209696092

Following gene: 209696086

Centisome position: 87.32

GC content: 40.38

Gene sequence:

>1518_bases
ATGGAAACTGAAATAGAACTAAAGTTTTTTGTTTTTCCTGAATTTGCAGACACTATTATAGACAAAATTTCGGATGCCAA
AGTCATAGAACACAGCAGTCTTGATTTAGGGAACACCTATTTTGACACGCCAGAACAGCATTTACGTAAGCACGATACGG
GGTTACGTATCCGTCGCTTTAATGATGAACGTATTCAAACACTAAAGACCGCGGGTCGTGTTGTAGCAGGATTACATCAA
CGTCCTGAATATAATGCAGAGCATGATTCGGATGTACCTAATGTGTTATTGCATCCCGCAGATGCATGGCCAAACGACAT
TACATTAGATGCACTTCAATTGCAGCTTGCTCCTTTGTTTTCAACTAATTTTACTCGTAAGCAGTGGTTGATTTTAATGT
CTGATGGCAGTGAAATTGAATTAGCTTTTGATCAAGGTGAGGTTCTCGCTGGTGATAAAACAACACCGATATGTGAAGTT
GAACTTGAGTTGAAGTCAGGCCAAACGGATGCCTTGTTTACATTAGCTCGGGATCTTTGCCGTTCTGGTGGGATGCGCTT
AGGCAATCAAAGCAAGGCTGCTAAAGGGTATCGTTTAGCCATGAATAGCCCTAAAGATAATGTAAAACCATTATCATTAG
TCAAAACGAGTTCCAACGACAGTGTTGAAACGTGTTTTGTAAACTCGCTAGAGCATGCTTTGTCTCATTGGCATTATCAC
GAACAAATTTACGTTGATACACACGATAAATTAGCGTTGCAGGAAATTCGAATCGCAATCGCGTTTTTACGTCAGATCTT
CCTTGTCTTCGGTGAAATGGTGCCAAAGCGTGCGAGTGAGTTATTACGACAAGAATTAAAGTGGTTAGAAGAAAAACTGC
ATTGGCTTGATGTTTCTGAGCATATTGAATACCTGACAGAAGAAAAAGGCAACGTACTAAGAAAACTGAATGCGCGTAAG
TTTTTAGTTTCTAGTTTAGAAGAAGGCGCAAAAACACTGCCAAGTGATGACGAAATGCTCTCTCTATTAAGATCATCTCG
TTATTGTGGTTTATTGCTTGATTTAAGCCGTTGGATTTTAACGCGAGATTGGCAACCTTTTTTAGATGATAAAAAACGTC
AATCATTGCAAGAACCAATAGATGCTCATTCAGGAACGCTTCTTGATCGCACTTGGGAGGCGCTAGAGTCTGCTTTTTCA
AGTTCCAATCAATTATTACCACAAGATTATTTTAAACAGAAAATGCGCTTACGCCGAAATTTGATGACGGGAACGTGTTT
TGCTCTTATCTATGATGATGAGCGTCGTACTGGTTTTCGATTACCTTGGCTTGATTTATTGCAAGGCATTGATGATTTGA
TGAGTTTGGAGCCATTAAGAGCACGTGTTGACTTACTTACCGGTGAAGAAGAGCGTGATCAGTTAGAACGTTGGATTATT
CGTCAAGAGCGATCCATGCTCCATGCAATGGAACAAACACGACGGGCTGGGTTAGCGTACCCTCCTTATTGGCAATAA

Upstream 100 bases:

>100_bases
TCAATAAAACTACTTTAGATCATGGTTTGGCTATTATTTCTTACTTGATACGGGATAGTTTAAGCCATATCCTTGGAAAG
ACAACGGTTATGAGGTCATT

Downstream 100 bases:

>100_bases
AAATACGATCTATTTATTGTCTTAAGCTGTCATGAAATATAAAGAGAAGTGTGCTTACTTCTCTTTGTTATTTTCGATTT
GATTAAGTCGTTCTAAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
METEIELKFFVFPEFADTIIDKISDAKVIEHSSLDLGNTYFDTPEQHLRKHDTGLRIRRFNDERIQTLKTAGRVVAGLHQ
RPEYNAEHDSDVPNVLLHPADAWPNDITLDALQLQLAPLFSTNFTRKQWLILMSDGSEIELAFDQGEVLAGDKTTPICEV
ELELKSGQTDALFTLARDLCRSGGMRLGNQSKAAKGYRLAMNSPKDNVKPLSLVKTSSNDSVETCFVNSLEHALSHWHYH
EQIYVDTHDKLALQEIRIAIAFLRQIFLVFGEMVPKRASELLRQELKWLEEKLHWLDVSEHIEYLTEEKGNVLRKLNARK
FLVSSLEEGAKTLPSDDEMLSLLRSSRYCGLLLDLSRWILTRDWQPFLDDKKRQSLQEPIDAHSGTLLDRTWEALESAFS
SSNQLLPQDYFKQKMRLRRNLMTGTCFALIYDDERRTGFRLPWLDLLQGIDDLMSLEPLRARVDLLTGEEERDQLERWII
RQERSMLHAMEQTRRAGLAYPPYWQ

Sequences:

>Translated_505_residues
METEIELKFFVFPEFADTIIDKISDAKVIEHSSLDLGNTYFDTPEQHLRKHDTGLRIRRFNDERIQTLKTAGRVVAGLHQ
RPEYNAEHDSDVPNVLLHPADAWPNDITLDALQLQLAPLFSTNFTRKQWLILMSDGSEIELAFDQGEVLAGDKTTPICEV
ELELKSGQTDALFTLARDLCRSGGMRLGNQSKAAKGYRLAMNSPKDNVKPLSLVKTSSNDSVETCFVNSLEHALSHWHYH
EQIYVDTHDKLALQEIRIAIAFLRQIFLVFGEMVPKRASELLRQELKWLEEKLHWLDVSEHIEYLTEEKGNVLRKLNARK
FLVSSLEEGAKTLPSDDEMLSLLRSSRYCGLLLDLSRWILTRDWQPFLDDKKRQSLQEPIDAHSGTLLDRTWEALESAFS
SSNQLLPQDYFKQKMRLRRNLMTGTCFALIYDDERRTGFRLPWLDLLQGIDDLMSLEPLRARVDLLTGEEERDQLERWII
RQERSMLHAMEQTRRAGLAYPPYWQ
>Mature_505_residues
METEIELKFFVFPEFADTIIDKISDAKVIEHSSLDLGNTYFDTPEQHLRKHDTGLRIRRFNDERIQTLKTAGRVVAGLHQ
RPEYNAEHDSDVPNVLLHPADAWPNDITLDALQLQLAPLFSTNFTRKQWLILMSDGSEIELAFDQGEVLAGDKTTPICEV
ELELKSGQTDALFTLARDLCRSGGMRLGNQSKAAKGYRLAMNSPKDNVKPLSLVKTSSNDSVETCFVNSLEHALSHWHYH
EQIYVDTHDKLALQEIRIAIAFLRQIFLVFGEMVPKRASELLRQELKWLEEKLHWLDVSEHIEYLTEEKGNVLRKLNARK
FLVSSLEEGAKTLPSDDEMLSLLRSSRYCGLLLDLSRWILTRDWQPFLDDKKRQSLQEPIDAHSGTLLDRTWEALESAFS
SSNQLLPQDYFKQKMRLRRNLMTGTCFALIYDDERRTGFRLPWLDLLQGIDDLMSLEPLRARVDLLTGEEERDQLERWII
RQERSMLHAMEQTRRAGLAYPPYWQ

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=450, Percent_Identity=34.4444444444444, Blast_Score=235, Evalue=4e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 58511; Mature: 58511

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METEIELKFFVFPEFADTIIDKISDAKVIEHSSLDLGNTYFDTPEQHLRKHDTGLRIRRF
CCCEEEEEEEECCHHHHHHHHHCCCCHHEECCCCCCCCCCCCCCHHHHHHCCCCCEEEEC
NDERIQTLKTAGRVVAGLHQRPEYNAEHDSDVPNVLLHPADAWPNDITLDALQLQLAPLF
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHH
STNFTRKQWLILMSDGSEIELAFDQGEVLAGDKTTPICEVELELKSGQTDALFTLARDLC
CCCCCCEEEEEEEECCCEEEEEECCCCEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHH
RSGGMRLGNQSKAAKGYRLAMNSPKDNVKPLSLVKTSSNDSVETCFVNSLEHALSHWHYH
HCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
EQIYVDTHDKLALQEIRIAIAFLRQIFLVFGEMVPKRASELLRQELKWLEEKLHWLDVSE
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
HIEYLTEEKGNVLRKLNARKFLVSSLEEGAKTLPSDDEMLSLLRSSRYCGLLLDLSRWIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
TRDWQPFLDDKKRQSLQEPIDAHSGTLLDRTWEALESAFSSSNQLLPQDYFKQKMRLRRN
HCCCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LMTGTCFALIYDDERRTGFRLPWLDLLQGIDDLMSLEPLRARVDLLTGEEERDQLERWII
HHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHH
RQERSMLHAMEQTRRAGLAYPPYWQ
HHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
METEIELKFFVFPEFADTIIDKISDAKVIEHSSLDLGNTYFDTPEQHLRKHDTGLRIRRF
CCCEEEEEEEECCHHHHHHHHHCCCCHHEECCCCCCCCCCCCCCHHHHHHCCCCCEEEEC
NDERIQTLKTAGRVVAGLHQRPEYNAEHDSDVPNVLLHPADAWPNDITLDALQLQLAPLF
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHH
STNFTRKQWLILMSDGSEIELAFDQGEVLAGDKTTPICEVELELKSGQTDALFTLARDLC
CCCCCCEEEEEEEECCCEEEEEECCCCEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHH
RSGGMRLGNQSKAAKGYRLAMNSPKDNVKPLSLVKTSSNDSVETCFVNSLEHALSHWHYH
HCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
EQIYVDTHDKLALQEIRIAIAFLRQIFLVFGEMVPKRASELLRQELKWLEEKLHWLDVSE
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
HIEYLTEEKGNVLRKLNARKFLVSSLEEGAKTLPSDDEMLSLLRSSRYCGLLLDLSRWIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
TRDWQPFLDDKKRQSLQEPIDAHSGTLLDRTWEALESAFSSSNQLLPQDYFKQKMRLRRN
HCCCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LMTGTCFALIYDDERRTGFRLPWLDLLQGIDDLMSLEPLRARVDLLTGEEERDQLERWII
HHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHH
RQERSMLHAMEQTRRAGLAYPPYWQ
HHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]