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The map label for this gene is petC [H]

Identifier: 209696068

GI number: 209696068

Start: 2878087

End: 2878824

Strand: Reverse

Name: petC [H]

Synonym: VSAL_I2660

Alternate gene names: 209696068

Gene position: 2878824-2878087 (Counterclockwise)

Preceding gene: 209696069

Following gene: 209696067

Centisome position: 86.58

GC content: 42.41

Gene sequence:

>738_bases
ATGAAAAAGTTGATTTTAGTACTTTTTGCTTTGTTGCCATCAATGGCAATGGCTGCAGGGTCGGGAGCGCCATTAGATAG
CGCAAATAATGATATTCGTGATCAAGCATCTCTTCAAAATGGTGCTAAGTTGTTCATGAACTATTGTGCGGGTTGTCACT
CTACTCAGTACCAACGTTACGGTCGAGTTGCTGAAGATCTTGGTATCCCTGTTGATCTGATGATGGATAATCTCGTGTTT
AATCCAGATGCGAAGATTGGAGACTTAATGGAAAATGCGATACCAGAAGAACAAGCGGCTAGTTGGTTTGGCGCTCCACC
ACCAGATCTAACGTTAGTTGCTCGCGTTCGAGGTACCGATTGGTTATATACGTATTTACGTACATTTTATGCCGATCCAA
CTCGTCCATTCGGTGTAAATAACATGGTTTTCCCTAGTGTCGGTATGCCTCATGTTCTTCAAGAACTGCAAGGCGTAACA
ACCCCTATTTATGAAACCACTGTTGTTGATGGCGTTGAACATAAAACGGTTATTGGTGTGGAATCAGATGGTACTGGTGA
GTTAACGGTCGGAGAGTTTGATGACTCTGTGCGCGATTTAGTTAATTTCTTGGAGTATTCAGGTGATCCAGTTCAGCTTG
AGCGTCATCGTTTAGGTTGGTGGGTGATGGGATTCCTAGTGATATTCGCTTTTGTTTGTTATTTACTTAAGAAAGAATAT
TGGCGCGATGTCCATTAA

Upstream 100 bases:

>100_bases
CTCAGATATTCAGCTTAACTTACTTTATGTTCTTTGTTCTTTTGTTTGTTTACAGTAAAAATGAAAAAACAAAACCATTA
CCAGAAAGGGTGACATTCAA

Downstream 100 bases:

>100_bases
TCGTGATATTCTAGGTCGTTAATTGTATGCAATGGAGGCCCTGCCTCCATTGTTTTTGTGTCACTACTTATTTTTATACG
AATGTTATAAAAAAATTAGC

Product: ubiquinol--cytochrome c reductase, cytochrome C1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKKLILVLFALLPSMAMAAGSGAPLDSANNDIRDQASLQNGAKLFMNYCAGCHSTQYQRYGRVAEDLGIPVDLMMDNLVF
NPDAKIGDLMENAIPEEQAASWFGAPPPDLTLVARVRGTDWLYTYLRTFYADPTRPFGVNNMVFPSVGMPHVLQELQGVT
TPIYETTVVDGVEHKTVIGVESDGTGELTVGEFDDSVRDLVNFLEYSGDPVQLERHRLGWWVMGFLVIFAFVCYLLKKEY
WRDVH

Sequences:

>Translated_245_residues
MKKLILVLFALLPSMAMAAGSGAPLDSANNDIRDQASLQNGAKLFMNYCAGCHSTQYQRYGRVAEDLGIPVDLMMDNLVF
NPDAKIGDLMENAIPEEQAASWFGAPPPDLTLVARVRGTDWLYTYLRTFYADPTRPFGVNNMVFPSVGMPHVLQELQGVT
TPIYETTVVDGVEHKTVIGVESDGTGELTVGEFDDSVRDLVNFLEYSGDPVQLERHRLGWWVMGFLVIFAFVCYLLKKEY
WRDVH
>Mature_245_residues
MKKLILVLFALLPSMAMAAGSGAPLDSANNDIRDQASLQNGAKLFMNYCAGCHSTQYQRYGRVAEDLGIPVDLMMDNLVF
NPDAKIGDLMENAIPEEQAASWFGAPPPDLTLVARVRGTDWLYTYLRTFYADPTRPFGVNNMVFPSVGMPHVLQELQGVT
TPIYETTVVDGVEHKTVIGVESDGTGELTVGEFDDSVRDLVNFLEYSGDPVQLERHRLGWWVMGFLVIFAFVCYLLKKEY
WRDVH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: NA

Molecular weight: Translated: 27378; Mature: 27378

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLILVLFALLPSMAMAAGSGAPLDSANNDIRDQASLQNGAKLFMNYCAGCHSTQYQRY
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GRVAEDLGIPVDLMMDNLVFNPDAKIGDLMENAIPEEQAASWFGAPPPDLTLVARVRGTD
HHHHHHHCCCHHHHHHHEEECCCCHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEEECCCH
WLYTYLRTFYADPTRPFGVNNMVFPSVGMPHVLQELQGVTTPIYETTVVDGVEHKTVIGV
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEE
ESDGTGELTVGEFDDSVRDLVNFLEYSGDPVQLERHRLGWWVMGFLVIFAFVCYLLKKEY
CCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRDVH
HCCCC
>Mature Secondary Structure
MKKLILVLFALLPSMAMAAGSGAPLDSANNDIRDQASLQNGAKLFMNYCAGCHSTQYQRY
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GRVAEDLGIPVDLMMDNLVFNPDAKIGDLMENAIPEEQAASWFGAPPPDLTLVARVRGTD
HHHHHHHCCCHHHHHHHEEECCCCHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEEECCCH
WLYTYLRTFYADPTRPFGVNNMVFPSVGMPHVLQELQGVTTPIYETTVVDGVEHKTVIGV
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEE
ESDGTGELTVGEFDDSVRDLVNFLEYSGDPVQLERHRLGWWVMGFLVIFAFVCYLLKKEY
CCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRDVH
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA