| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is ftsQ [H]
Identifier: 209696050
GI number: 209696050
Start: 2858804
End: 2859574
Strand: Reverse
Name: ftsQ [H]
Synonym: VSAL_I2642
Alternate gene names: 209696050
Gene position: 2859574-2858804 (Counterclockwise)
Preceding gene: 209696051
Following gene: 209696049
Centisome position: 86.0
GC content: 37.48
Gene sequence:
>771_bases ATGATTAAGACTGTCAAAATGAATGCATCATTTGATAAAGAGAAAATAAGAAAACACTTACCAGGTGGCTTATTTCTTTT ATTTGTTATTATCATTTCGCTTTGGTTGTTAGTGTCGACGATTAGCTGGATGACGGATAAAGATAGATTGCCCTTATCTC ACATGATCATTCAAGGACAATTAAAACATATAACGGCTGATGATATTCGTGGAGCCATTGAATCTATGGATTCTGTCGGT ACCTTCATGACTCAGGATGTCAATAAACTGCAAGATGCATTGTTATCTTTGCCTTGGATAGCTCAAGTCTCGGTTAGAAA GCAATGGCCAGAAACGATCAAAGTGTTTGTGGTTGAGAATCAACCGGAAGCAACATGGAATAACAGCGTTATTGTTAATC CTGAAGGTGTTGTTTTTAATGCACCAATGAGCGATTTGTTAGAATCAAAGCCTGCATTATTTGGTCCAGATACGGACAGT AAAGAAGTGTTGAGTTTTTGGCATCAACTACAAAAAGAATTTAAACCACTAAATATTACGGTTCACAGTGTTGCGTTAAC TGAACGATTATCTTGGCAAGTGGTTCTCGATAATGGTATTCGATTAGAACTTGGTCGCGATGCGCGTGAAGAAAGAGTGG AACGCTTTATTGCTTTATATAAGCAATTAGCAGATAAGAAACATTCGATTGATTACATAGATCTTCGTTATGACACCGGT GCCGCTGTTGGCTGGAAATCAGAAAATCTAGAAGACAAAGAAGAGAATTGA
Upstream 100 bases:
>100_bases CCTATAATTATTAGATAATGGCATTTTGGCATTACTTAATGTCTATTTGAGCGAATTAGGTAGGCATTACGTTGTTTATT AACACTGTTATGAAAATTAT
Downstream 100 bases:
>100_bases CATGAGTAAAACGCCAGAAGGCAGTATTATTGTTGGTTTAGACATAGGTACAAACAAAGTATCCGCACTCGTGGGTGAGG TTTTACCTGATGGCCAAGTG
Product: cell division protein FtsQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MIKTVKMNASFDKEKIRKHLPGGLFLLFVIIISLWLLVSTISWMTDKDRLPLSHMIIQGQLKHITADDIRGAIESMDSVG TFMTQDVNKLQDALLSLPWIAQVSVRKQWPETIKVFVVENQPEATWNNSVIVNPEGVVFNAPMSDLLESKPALFGPDTDS KEVLSFWHQLQKEFKPLNITVHSVALTERLSWQVVLDNGIRLELGRDAREERVERFIALYKQLADKKHSIDYIDLRYDTG AAVGWKSENLEDKEEN
Sequences:
>Translated_256_residues MIKTVKMNASFDKEKIRKHLPGGLFLLFVIIISLWLLVSTISWMTDKDRLPLSHMIIQGQLKHITADDIRGAIESMDSVG TFMTQDVNKLQDALLSLPWIAQVSVRKQWPETIKVFVVENQPEATWNNSVIVNPEGVVFNAPMSDLLESKPALFGPDTDS KEVLSFWHQLQKEFKPLNITVHSVALTERLSWQVVLDNGIRLELGRDAREERVERFIALYKQLADKKHSIDYIDLRYDTG AAVGWKSENLEDKEEN >Mature_256_residues MIKTVKMNASFDKEKIRKHLPGGLFLLFVIIISLWLLVSTISWMTDKDRLPLSHMIIQGQLKHITADDIRGAIESMDSVG TFMTQDVNKLQDALLSLPWIAQVSVRKQWPETIKVFVVENQPEATWNNSVIVNPEGVVFNAPMSDLLESKPALFGPDTDS KEVLSFWHQLQKEFKPLNITVHSVALTERLSWQVVLDNGIRLELGRDAREERVERFIALYKQLADKKHSIDYIDLRYDTG AAVGWKSENLEDKEEN
Specific function: This protein may be involved in septum formation [H]
COG id: COG1589
COG function: function code M; Cell division septal protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsQ family [H]
Homologues:
Organism=Escherichia coli, GI1786281, Length=211, Percent_Identity=42.1800947867299, Blast_Score=173, Evalue=1e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005548 - InterPro: IPR013685 [H]
Pfam domain/function: PF03799 FtsQ; PF08478 POTRA_1 [H]
EC number: NA
Molecular weight: Translated: 29312; Mature: 29312
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTVKMNASFDKEKIRKHLPGGLFLLFVIIISLWLLVSTISWMTDKDRLPLSHMIIQGQ CCEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LKHITADDIRGAIESMDSVGTFMTQDVNKLQDALLSLPWIAQVSVRKQWPETIKVFVVEN HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEEC QPEATWNNSVIVNPEGVVFNAPMSDLLESKPALFGPDTDSKEVLSFWHQLQKEFKPLNIT CCCCCCCCEEEECCCCEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE VHSVALTERLSWQVVLDNGIRLELGRDAREERVERFIALYKQLADKKHSIDYIDLRYDTG EEEEEHHHHCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC AAVGWKSENLEDKEEN CEECCCCCCCCCCCCC >Mature Secondary Structure MIKTVKMNASFDKEKIRKHLPGGLFLLFVIIISLWLLVSTISWMTDKDRLPLSHMIIQGQ CCEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LKHITADDIRGAIESMDSVGTFMTQDVNKLQDALLSLPWIAQVSVRKQWPETIKVFVVEN HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEEC QPEATWNNSVIVNPEGVVFNAPMSDLLESKPALFGPDTDSKEVLSFWHQLQKEFKPLNIT CCCCCCCCEEEECCCCEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE VHSVALTERLSWQVVLDNGIRLELGRDAREERVERFIALYKQLADKKHSIDYIDLRYDTG EEEEEHHHHCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC AAVGWKSENLEDKEEN CEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2995680; 6094474; 2228979; 1630901; 9278503; 3528126 [H]