| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is gntP [C]
Identifier: 209696009
GI number: 209696009
Start: 2796247
End: 2797512
Strand: Direct
Name: gntP [C]
Synonym: VSAL_I2593
Alternate gene names: 209696009
Gene position: 2796247-2797512 (Clockwise)
Preceding gene: 209696008
Following gene: 209696010
Centisome position: 84.09
GC content: 44.23
Gene sequence:
>1266_bases ATGATCGAAGTATCTACTTTGGGTGCACTGGCCGCTCTCACCGTTTCAATTACGCTCATTTTGAGAAAAGTACCGCCTGC GTATGGCATGATCATTGGTGCGCTTATCGGTGGTATCGTTGGTGGAGTGTCTTTAACCGATACTGTAAATTTAATGATTG GCGGTGCACAAAGTATCGTTACAGCAGTACTTCGAATTCTAGCAGCAGGTGTTCTTGCTGGTGTTCTGATTGAATCAGGA GCAGCAACTTCGATAGCAGAAACTATTGTTAAAAAAGTAGGAGAAACCAGAGCTTTACTCGCACTCGCCGTCGCAACGAT GATTTTAACTGCCGTAGGTGTCTTTGTTGACGTAGCAGTAATTACCGTTGCTCCGATTGCATTAGCGATTGCTCGTCGTG CTGACCTTTCAAAAATGGCAATTCTATTAGCTATGGTTGGTGGCGGTAAAGCAGGTAATGTGATGTCACCTAACCCAAAT GCGATTGCTGCTGCTGATGCCTTTAATGTTCCTTTAACTTCGGTAATGGCTGCCGGTGTTATTCCTGGTTTATTTGGCGT CGTTTTCGCTTACTTTATTGCGAAAAAATTAGTGAATAAAGGCAGTAAAGTTCAAGAACACGAAATCGTCTCTGTTGATC ATTCTCGTCTACCAAGTTTTGTTGCTTCAATGGTTGCCCCTCTTGTTGCTATCAGCCTTCTTGCCTTACGTCCTATCGCA GGAATTAATGTTGACCCTTTAATTGCCCTTCCACTTGGTGGCTTACTTGGTGCTCTAGCAATGGGCCGATTTAAAGACAC TAACCATTTTGCAGTATCCGGTCTATCTCGAATGGCTCCCGTTGCAGTGATGTTGCTAGGTACAGGTACACTCGCTGGTA TCATTGCAAATTCAGGTCTCAAATCAGGGTTGATTGAAGTATTAACTGCATCTGGTCTTCCTTCTTATTTATTAGCACCA ATTTCTGGTGCCATGATGTCACTAGCAACAGCATCAACCACAGCCGGTACTGCCGTTGCTGCAAGTGTATTTAGTCATAC TATCCTAGAGCTTGGCGTGCCTGCTCTTGCTGGTGCCGCAATGATTCATGCAGGTGCAACGGTATTTGATCACATGCCAC ACGGCAGTTTCTTTCATGCGACAGGCGGTGCTGTTCATATGGATATGAAAGAACGCTTAAAACTAATCCCTTACGAATCA GCAGTCGGTCTAATGATCGCTACCGTCTCTACTCTTATTTTTGGCGTCTTTGGTTTATTTGTTTAA
Upstream 100 bases:
>100_bases AATAGATTATCTGTCAATTAAATTTGGTCATTAGTCTAAAGCTTATTATCGTTGTTACCGATAGATTACCGACATCTTAA TTATTAAACGGAACATTAAT
Downstream 100 bases:
>100_bases TAAGGCTTTATTATGAAAATTGTTATTGCTCCCGATTCATACAAAGAAAGTTTGACCGCAATGGAAGTTGCTACCGCAAT TGAAGCTGGATTTAAACAAG
Product: gluconate permease
Products: Proton [Cytoplasm]; gluconate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MIEVSTLGALAALTVSITLILRKVPPAYGMIIGALIGGIVGGVSLTDTVNLMIGGAQSIVTAVLRILAAGVLAGVLIESG AATSIAETIVKKVGETRALLALAVATMILTAVGVFVDVAVITVAPIALAIARRADLSKMAILLAMVGGGKAGNVMSPNPN AIAAADAFNVPLTSVMAAGVIPGLFGVVFAYFIAKKLVNKGSKVQEHEIVSVDHSRLPSFVASMVAPLVAISLLALRPIA GINVDPLIALPLGGLLGALAMGRFKDTNHFAVSGLSRMAPVAVMLLGTGTLAGIIANSGLKSGLIEVLTASGLPSYLLAP ISGAMMSLATASTTAGTAVAASVFSHTILELGVPALAGAAMIHAGATVFDHMPHGSFFHATGGAVHMDMKERLKLIPYES AVGLMIATVSTLIFGVFGLFV
Sequences:
>Translated_421_residues MIEVSTLGALAALTVSITLILRKVPPAYGMIIGALIGGIVGGVSLTDTVNLMIGGAQSIVTAVLRILAAGVLAGVLIESG AATSIAETIVKKVGETRALLALAVATMILTAVGVFVDVAVITVAPIALAIARRADLSKMAILLAMVGGGKAGNVMSPNPN AIAAADAFNVPLTSVMAAGVIPGLFGVVFAYFIAKKLVNKGSKVQEHEIVSVDHSRLPSFVASMVAPLVAISLLALRPIA GINVDPLIALPLGGLLGALAMGRFKDTNHFAVSGLSRMAPVAVMLLGTGTLAGIIANSGLKSGLIEVLTASGLPSYLLAP ISGAMMSLATASTTAGTAVAASVFSHTILELGVPALAGAAMIHAGATVFDHMPHGSFFHATGGAVHMDMKERLKLIPYES AVGLMIATVSTLIFGVFGLFV >Mature_421_residues MIEVSTLGALAALTVSITLILRKVPPAYGMIIGALIGGIVGGVSLTDTVNLMIGGAQSIVTAVLRILAAGVLAGVLIESG AATSIAETIVKKVGETRALLALAVATMILTAVGVFVDVAVITVAPIALAIARRADLSKMAILLAMVGGGKAGNVMSPNPN AIAAADAFNVPLTSVMAAGVIPGLFGVVFAYFIAKKLVNKGSKVQEHEIVSVDHSRLPSFVASMVAPLVAISLLALRPIA GINVDPLIALPLGGLLGALAMGRFKDTNHFAVSGLSRMAPVAVMLLGTGTLAGIIANSGLKSGLIEVLTASGLPSYLLAP ISGAMMSLATASTTAGTAVAASVFSHTILELGVPALAGAAMIHAGATVFDHMPHGSFFHATGGAVHMDMKERLKLIPYES AVGLMIATVSTLIFGVFGLFV
Specific function: High-Affinity Gluconate Transporter With Fairly Broad Specificity, Including Low Affinity For Glucuronate, Several Disaccharides, And Some Hexoses, But Not Glucose. [C]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 42364; Mature: 42364
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEVSTLGALAALTVSITLILRKVPPAYGMIIGALIGGIVGGVSLTDTVNLMIGGAQSIV CEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHEECCHHHHH TAVLRILAAGVLAGVLIESGAATSIAETIVKKVGETRALLALAVATMILTAVGVFVDVAV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH ITVAPIALAIARRADLSKMAILLAMVGGGKAGNVMSPNPNAIAAADAFNVPLTSVMAAGV HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHH IPGLFGVVFAYFIAKKLVNKGSKVQEHEIVSVDHSRLPSFVASMVAPLVAISLLALRPIA HHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCCC GINVDPLIALPLGGLLGALAMGRFKDTNHFAVSGLSRMAPVAVMLLGTGTLAGIIANSGL CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCH KSGLIEVLTASGLPSYLLAPISGAMMSLATASTTAGTAVAASVFSHTILELGVPALAGAA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHH MIHAGATVFDHMPHGSFFHATGGAVHMDMKERLKLIPYESAVGLMIATVSTLIFGVFGLF HHHCCCHHHHCCCCCCEEECCCCEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH V C >Mature Secondary Structure MIEVSTLGALAALTVSITLILRKVPPAYGMIIGALIGGIVGGVSLTDTVNLMIGGAQSIV CEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHEECCHHHHH TAVLRILAAGVLAGVLIESGAATSIAETIVKKVGETRALLALAVATMILTAVGVFVDVAV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH ITVAPIALAIARRADLSKMAILLAMVGGGKAGNVMSPNPNAIAAADAFNVPLTSVMAAGV HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHH IPGLFGVVFAYFIAKKLVNKGSKVQEHEIVSVDHSRLPSFVASMVAPLVAISLLALRPIA HHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCCC GINVDPLIALPLGGLLGALAMGRFKDTNHFAVSGLSRMAPVAVMLLGTGTLAGIIANSGL CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCH KSGLIEVLTASGLPSYLLAPISGAMMSLATASTTAGTAVAASVFSHTILELGVPALAGAA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHH MIHAGATVFDHMPHGSFFHATGGAVHMDMKERLKLIPYESAVGLMIATVSTLIFGVFGLF HHHCCCHHHHCCCCCCEEECCCCEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH V C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; gluconate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]