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The map label for this gene is recN [H]

Identifier: 209695895

GI number: 209695895

Start: 2650071

End: 2651768

Strand: Direct

Name: recN [H]

Synonym: VSAL_I2475

Alternate gene names: 209695895

Gene position: 2650071-2651768 (Clockwise)

Preceding gene: 209695894

Following gene: 209695896

Centisome position: 79.7

GC content: 38.99

Gene sequence:

>1698_bases
GTGTTATTTAAATTTCGTAGAGAATGGCTTATGTTGGCACATATTAAAATTACTCATTTCGCAATCGTGAAATCGCTAGA
ATTAGATCTTACCAAAGGCATGACCACCATTACTGGTGAAACTGGTGCCGGTAAATCTATCGCGATTGATGCTCTTGGTT
TATGTCTAGGTGATCGAGCTGAAGCGTCAATGGTTCGCCAAGGCGAAGAGAAAGCAGAGATCACAGTTCTCTTTACTTTG
GAGAACAATATTAATGCTAAGCGATGGTTAGAAGATAACGAATTATACGATGGCAATGATTGTATTCTACGCCGTGTAAT
CACTAAAGAAGGCCGCTCTCGTGGCTTTATTAATGGCAGCCCTGTACCTGCAACACAGCTAAAAACACTAGGTCACTTAT
TAATTAATATTCATGGTCAACATGCTCATCATGAATTAATGAAACCTGAATATCAGCTCAATATGTTAGACCAATACGCT
GGACATCTTTCTCTATTAAATAAAACACGCAGTCGTTATCAAGCATGGCGTCAATGCGATAATTCATTGAAACAATTAAT
CAAAAACAGTCTACAAAACGAAGCGCAAAAACAGCTGATTGAATACCAAATAAAAGAATTGAATGAATTAGCATTAGGTG
AAGAAGAATTCGCAACCCTTGAGGAAGATCATAAACGTCTTTCAAATTCGAGTGAATTAGTTGATTACTGCCAACAAGCC
GTCTCTCTGTTGTATGAAAACGATGATGTGAATGCACTTCAACTTCTTCAGCATGCAAATAATCATATTCAACAATTAAG
TCAGCTTGACCCGCAATTGGCCCCATTAACTGAAATGTTAAATGACGCGATGATTCAAGTAGAAGAAGCAAACCATGAGC
TTAAGCATTATTTAGATACTATCGATGTTGACCCTTCTCAAATCGCTTATGTCGAAGAGCGCTTCAGTAAAGTCATGTCA
ATGGCTAAAAAGCACCATGTCGTCGCTGATGAATTATATGAACATCATCAACAACTCTTAGCTGAATATGAACGCCTAGA
TTGCTCCGATGAAAAACGAGAACTACGCGAACAAGAAGTAGAAGAATTAAAACAACACTTCTTAGAGTCTGCACATAAGC
TCACTAAAAGTCGTCAACGTTACGCAAAAGAGCTAAACAATAAAATCACGGAAAGCATGCAAACATTAAGCATGGAAAAA
GCCGTTTTTGATATTCAAATAGAAAGTGATGCCGCCACTAAAATTTCACCACTAGGCATTGATACTTTATGCTTCAAAGT
ATCAACCAACCCGGGGCAGCCTTTGCACCCTATCGCTAAAGTTGCTTCTGGTGGTGAGCTATCTCGAATTTCTCTGGCTA
TACAAGTTATTACGGCGCAAAAAATAGAAACACCAAGTTTGATTTTTGATGAAGTTGACGTCGGTATCAGTGGACCAACT
GCAGCAGTTGTAGGAAAAATGCTTCGCACTTTAGGTGAATCAACCCAAGTACTGTGTGTTACCCACCTACCTCAAGTTGC
AGGCTGTGGGCATAACCAATTATTTGTTGAAAAACAAACAACGTCAGGAAAAACAGAAACACAAATGCGCCCACTTAACA
CGCAAGAACGCGTAGAAGAATTAGCGCGTTTACTTGGCGGAACTAAAATTACAGCACATACCTTAGCTAATGCCAAAGAA
TTGTTAAACGCAGCTTAA

Upstream 100 bases:

>100_bases
TAAAAACCATAATCTTAAATCATAAGCGATTCACAAAAAATTCAAATAAACTTTACTGTATAAAGAAACAGTATATACTG
TTTCTTTATACAGTACTTTA

Downstream 100 bases:

>100_bases
ATAGCCTTATCTACTTACATCGATGTAAGTAGATAAATACATAAAACTAAGATAAACGAAGCCAGTACAACAATTGTATT
GGCTTTTTTATTTCACTTTA

Product: recombination and repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MLFKFRREWLMLAHIKITHFAIVKSLELDLTKGMTTITGETGAGKSIAIDALGLCLGDRAEASMVRQGEEKAEITVLFTL
ENNINAKRWLEDNELYDGNDCILRRVITKEGRSRGFINGSPVPATQLKTLGHLLINIHGQHAHHELMKPEYQLNMLDQYA
GHLSLLNKTRSRYQAWRQCDNSLKQLIKNSLQNEAQKQLIEYQIKELNELALGEEEFATLEEDHKRLSNSSELVDYCQQA
VSLLYENDDVNALQLLQHANNHIQQLSQLDPQLAPLTEMLNDAMIQVEEANHELKHYLDTIDVDPSQIAYVEERFSKVMS
MAKKHHVVADELYEHHQQLLAEYERLDCSDEKRELREQEVEELKQHFLESAHKLTKSRQRYAKELNNKITESMQTLSMEK
AVFDIQIESDAATKISPLGIDTLCFKVSTNPGQPLHPIAKVASGGELSRISLAIQVITAQKIETPSLIFDEVDVGISGPT
AAVVGKMLRTLGESTQVLCVTHLPQVAGCGHNQLFVEKQTTSGKTETQMRPLNTQERVEELARLLGGTKITAHTLANAKE
LLNAA

Sequences:

>Translated_565_residues
MLFKFRREWLMLAHIKITHFAIVKSLELDLTKGMTTITGETGAGKSIAIDALGLCLGDRAEASMVRQGEEKAEITVLFTL
ENNINAKRWLEDNELYDGNDCILRRVITKEGRSRGFINGSPVPATQLKTLGHLLINIHGQHAHHELMKPEYQLNMLDQYA
GHLSLLNKTRSRYQAWRQCDNSLKQLIKNSLQNEAQKQLIEYQIKELNELALGEEEFATLEEDHKRLSNSSELVDYCQQA
VSLLYENDDVNALQLLQHANNHIQQLSQLDPQLAPLTEMLNDAMIQVEEANHELKHYLDTIDVDPSQIAYVEERFSKVMS
MAKKHHVVADELYEHHQQLLAEYERLDCSDEKRELREQEVEELKQHFLESAHKLTKSRQRYAKELNNKITESMQTLSMEK
AVFDIQIESDAATKISPLGIDTLCFKVSTNPGQPLHPIAKVASGGELSRISLAIQVITAQKIETPSLIFDEVDVGISGPT
AAVVGKMLRTLGESTQVLCVTHLPQVAGCGHNQLFVEKQTTSGKTETQMRPLNTQERVEELARLLGGTKITAHTLANAKE
LLNAA
>Mature_565_residues
MLFKFRREWLMLAHIKITHFAIVKSLELDLTKGMTTITGETGAGKSIAIDALGLCLGDRAEASMVRQGEEKAEITVLFTL
ENNINAKRWLEDNELYDGNDCILRRVITKEGRSRGFINGSPVPATQLKTLGHLLINIHGQHAHHELMKPEYQLNMLDQYA
GHLSLLNKTRSRYQAWRQCDNSLKQLIKNSLQNEAQKQLIEYQIKELNELALGEEEFATLEEDHKRLSNSSELVDYCQQA
VSLLYENDDVNALQLLQHANNHIQQLSQLDPQLAPLTEMLNDAMIQVEEANHELKHYLDTIDVDPSQIAYVEERFSKVMS
MAKKHHVVADELYEHHQQLLAEYERLDCSDEKRELREQEVEELKQHFLESAHKLTKSRQRYAKELNNKITESMQTLSMEK
AVFDIQIESDAATKISPLGIDTLCFKVSTNPGQPLHPIAKVASGGELSRISLAIQVITAQKIETPSLIFDEVDVGISGPT
AAVVGKMLRTLGESTQVLCVTHLPQVAGCGHNQLFVEKQTTSGKTETQMRPLNTQERVEELARLLGGTKITAHTLANAKE
LLNAA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=554, Percent_Identity=53.4296028880866, Blast_Score=582, Evalue=1e-167,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 63702; Mature: 63702

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFKFRREWLMLAHIKITHFAIVKSLELDLTKGMTTITGETGAGKSIAIDALGLCLGDRA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEHHHHHHHHCCCH
EASMVRQGEEKAEITVLFTLENNINAKRWLEDNELYDGNDCILRRVITKEGRSRGFINGS
HHHHHHCCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
PVPATQLKTLGHLLINIHGQHAHHELMKPEYQLNMLDQYAGHLSLLNKTRSRYQAWRQCD
CCCHHHHHHHHHHHHEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSLKQLIKNSLQNEAQKQLIEYQIKELNELALGEEEFATLEEDHKRLSNSSELVDYCQQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
VSLLYENDDVNALQLLQHANNHIQQLSQLDPQLAPLTEMLNDAMIQVEEANHELKHYLDT
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHH
IDVDPSQIAYVEERFSKVMSMAKKHHVVADELYEHHQQLLAEYERLDCSDEKRELREQEV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
EELKQHFLESAHKLTKSRQRYAKELNNKITESMQTLSMEKAVFDIQIESDAATKISPLGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCC
DTLCFKVSTNPGQPLHPIAKVASGGELSRISLAIQVITAQKIETPSLIFDEVDVGISGPT
EEEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCH
AAVVGKMLRTLGESTQVLCVTHLPQVAGCGHNQLFVEKQTTSGKTETQMRPLNTQERVEE
HHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHH
LARLLGGTKITAHTLANAKELLNAA
HHHHHCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLFKFRREWLMLAHIKITHFAIVKSLELDLTKGMTTITGETGAGKSIAIDALGLCLGDRA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEHHHHHHHHCCCH
EASMVRQGEEKAEITVLFTLENNINAKRWLEDNELYDGNDCILRRVITKEGRSRGFINGS
HHHHHHCCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
PVPATQLKTLGHLLINIHGQHAHHELMKPEYQLNMLDQYAGHLSLLNKTRSRYQAWRQCD
CCCHHHHHHHHHHHHEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSLKQLIKNSLQNEAQKQLIEYQIKELNELALGEEEFATLEEDHKRLSNSSELVDYCQQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
VSLLYENDDVNALQLLQHANNHIQQLSQLDPQLAPLTEMLNDAMIQVEEANHELKHYLDT
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEHHHHHHHHHHHHHH
IDVDPSQIAYVEERFSKVMSMAKKHHVVADELYEHHQQLLAEYERLDCSDEKRELREQEV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
EELKQHFLESAHKLTKSRQRYAKELNNKITESMQTLSMEKAVFDIQIESDAATKISPLGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCC
DTLCFKVSTNPGQPLHPIAKVASGGELSRISLAIQVITAQKIETPSLIFDEVDVGISGPT
EEEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCH
AAVVGKMLRTLGESTQVLCVTHLPQVAGCGHNQLFVEKQTTSGKTETQMRPLNTQERVEE
HHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHH
LARLLGGTKITAHTLANAKELLNAA
HHHHHCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA