| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is ppnK [H]
Identifier: 209695894
GI number: 209695894
Start: 2649080
End: 2649973
Strand: Direct
Name: ppnK [H]
Synonym: VSAL_I2474
Alternate gene names: 209695894
Gene position: 2649080-2649973 (Clockwise)
Preceding gene: 209695889
Following gene: 209695895
Centisome position: 79.67
GC content: 39.6
Gene sequence:
>894_bases ATGATGGATATGAAAACAGCTTTTAACGTTATAGCAATCATTGGTAAACCTAGAGACCCTAATGCCATAAAAACGCATTT AGCCTTATACGATTGGCTTACTGAGCTAAATTATACGGTTTTATTGGATGAGCGTTTACGTGAAGCTCTGCCTACTATAC CTGATGAATGCTTTAACCATCTTCCTAAACTTGGTGAGTTAGCCGATCTTGCAATTGTTGTTGGTGGTGATGGGAACATG CTCGGCGCGGCACGTGTATTATCACGCTTTGATATTTCCGTTATTGGCGTAAATAGAGGGAACCTTGGGTTTTTAACCGA TCTTGACCCTGATAATTTTAAAGAGCCATTAACTGAAGTATTAAATGGCGAATTCATAAAAGAAGAACGTTTCTTACTTG AATCTGAAGTTCACCGCCATGGACAATTAAAAAGTCACAATTCAGCGTTTAATGAAGTTGTCCTTCACCCTGGACAAGTG GCACATATGATTGAATTTGAAGTCTATATTGATGATAGCTTTGCGTTCTCTCAACGCTCTGATGGCTTGATTATTTCAAC CCCAACAGGATCAACCGCTTATTCTTTGTCTGGCGGTGGTCCAATCCTTTCTCCTAATTTAAATGCCATTTCAATTGTTC CTATGTTTCCACATACGCTTTCAAGTCGACCTTTAGTCGTTGAGGGAGGCCGCCATATTAAATTATTAGTTTCCCCAGAT AATCGCAGTTCACTTGAAGTCAGTTGTGATGGACAAGTCTCTTTACCAGTTAGCCCAGGTGACGAAGTTCATATTTTCCA AAGCCCAGGCAAGTTGCAACTTATCCACCCCAAAGATTATATCTACTATCATGTACTTAGAAATAAGTTAGGCTGGTCTA GTAAGCTTTTCTAA
Upstream 100 bases:
>100_bases CTACAAGCAAATTAAAACTTTGTCATTATTATGGGGACTAAATAAAGCGATTCAAGCATAATAGTATTAATTGTAACATT TGTTCCCCATTTAATGATGG
Downstream 100 bases:
>100_bases AAACCATAATCTTAAATCATAAGCGATTCACAAAAAATTCAAATAAACTTTACTGTATAAAGAAACAGTATATACTGTTT CTTTATACAGTACTTTAGTG
Product: inorganic polyphosphate/ATP-NAD kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase [H]
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MMDMKTAFNVIAIIGKPRDPNAIKTHLALYDWLTELNYTVLLDERLREALPTIPDECFNHLPKLGELADLAIVVGGDGNM LGAARVLSRFDISVIGVNRGNLGFLTDLDPDNFKEPLTEVLNGEFIKEERFLLESEVHRHGQLKSHNSAFNEVVLHPGQV AHMIEFEVYIDDSFAFSQRSDGLIISTPTGSTAYSLSGGGPILSPNLNAISIVPMFPHTLSSRPLVVEGGRHIKLLVSPD NRSSLEVSCDGQVSLPVSPGDEVHIFQSPGKLQLIHPKDYIYYHVLRNKLGWSSKLF
Sequences:
>Translated_297_residues MMDMKTAFNVIAIIGKPRDPNAIKTHLALYDWLTELNYTVLLDERLREALPTIPDECFNHLPKLGELADLAIVVGGDGNM LGAARVLSRFDISVIGVNRGNLGFLTDLDPDNFKEPLTEVLNGEFIKEERFLLESEVHRHGQLKSHNSAFNEVVLHPGQV AHMIEFEVYIDDSFAFSQRSDGLIISTPTGSTAYSLSGGGPILSPNLNAISIVPMFPHTLSSRPLVVEGGRHIKLLVSPD NRSSLEVSCDGQVSLPVSPGDEVHIFQSPGKLQLIHPKDYIYYHVLRNKLGWSSKLF >Mature_297_residues MMDMKTAFNVIAIIGKPRDPNAIKTHLALYDWLTELNYTVLLDERLREALPTIPDECFNHLPKLGELADLAIVVGGDGNM LGAARVLSRFDISVIGVNRGNLGFLTDLDPDNFKEPLTEVLNGEFIKEERFLLESEVHRHGQLKSHNSAFNEVVLHPGQV AHMIEFEVYIDDSFAFSQRSDGLIISTPTGSTAYSLSGGGPILSPNLNAISIVPMFPHTLSSRPLVVEGGRHIKLLVSPD NRSSLEVSCDGQVSLPVSPGDEVHIFQSPGKLQLIHPKDYIYYHVLRNKLGWSSKLF
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus [H]
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family [H]
Homologues:
Organism=Homo sapiens, GI55743112, Length=324, Percent_Identity=28.3950617283951, Blast_Score=112, Evalue=5e-25, Organism=Escherichia coli, GI1788968, Length=294, Percent_Identity=58.843537414966, Blast_Score=355, Evalue=2e-99, Organism=Saccharomyces cerevisiae, GI6320794, Length=242, Percent_Identity=32.6446280991736, Blast_Score=137, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6322509, Length=241, Percent_Identity=30.7053941908714, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6325068, Length=219, Percent_Identity=31.9634703196347, Blast_Score=109, Evalue=5e-25, Organism=Drosophila melanogaster, GI28573826, Length=317, Percent_Identity=30.5993690851735, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI28573830, Length=322, Percent_Identity=30.1242236024845, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI28573828, Length=318, Percent_Identity=30.5031446540881, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI161077047, Length=318, Percent_Identity=30.5031446540881, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI28573832, Length=322, Percent_Identity=30.1242236024845, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI24653424, Length=295, Percent_Identity=28.8135593220339, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI20129957, Length=295, Percent_Identity=28.8135593220339, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI281363321, Length=295, Percent_Identity=28.8135593220339, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI281363323, Length=295, Percent_Identity=28.8135593220339, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI24653422, Length=295, Percent_Identity=28.8135593220339, Blast_Score=106, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 [H]
Pfam domain/function: PF01513 NAD_kinase [H]
EC number: =2.7.1.23 [H]
Molecular weight: Translated: 32863; Mature: 32863
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDMKTAFNVIAIIGKPRDPNAIKTHLALYDWLTELNYTVLLDERLREALPTIPDECFNH CCCHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHCCCCHHHHHHH LPKLGELADLAIVVGGDGNMLGAARVLSRFDISVIGVNRGNLGFLTDLDPDNFKEPLTEV CCCCCCCEEEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCEEEEECCCCCHHHHHHHHH LNGEFIKEERFLLESEVHRHGQLKSHNSAFNEVVLHPGQVAHMIEFEVYIDDSFAFSQRS HCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHEEECCCCEEEEEEEEEEECCCEEECCCC DGLIISTPTGSTAYSLSGGGPILSPNLNAISIVPMFPHTLSSRPLVVEGGRHIKLLVSPD CCEEEECCCCCEEEEECCCCCEECCCCCEEEEEEECCCCCCCCCEEEECCCEEEEEECCC NRSSLEVSCDGQVSLPVSPGDEVHIFQSPGKLQLIHPKDYIYYHVLRNKLGWSSKLF CCCEEEEEECCEEEEECCCCCCEEEEECCCCEEEECCCHHEEEEEHHHCCCCCCCCC >Mature Secondary Structure MMDMKTAFNVIAIIGKPRDPNAIKTHLALYDWLTELNYTVLLDERLREALPTIPDECFNH CCCHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHCCCCHHHHHHH LPKLGELADLAIVVGGDGNMLGAARVLSRFDISVIGVNRGNLGFLTDLDPDNFKEPLTEV CCCCCCCEEEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCEEEEECCCCCHHHHHHHHH LNGEFIKEERFLLESEVHRHGQLKSHNSAFNEVVLHPGQVAHMIEFEVYIDDSFAFSQRS HCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHEEECCCCEEEEEEEEEEECCCEEECCCC DGLIISTPTGSTAYSLSGGGPILSPNLNAISIVPMFPHTLSSRPLVVEGGRHIKLLVSPD CCEEEECCCCCEEEEECCCCCEECCCCCEEEEEEECCCCCCCCCEEEECCCEEEEEECCC NRSSLEVSCDGQVSLPVSPGDEVHIFQSPGKLQLIHPKDYIYYHVLRNKLGWSSKLF CCCEEEEEECCEEEEECCCCCCEEEEECCCCEEEECCCHHEEEEEHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA