| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is cysZ [H]
Identifier: 209695781
GI number: 209695781
Start: 2530101
End: 2530853
Strand: Direct
Name: cysZ [H]
Synonym: VSAL_I2355
Alternate gene names: 209695781
Gene position: 2530101-2530853 (Clockwise)
Preceding gene: 209695776
Following gene: 209695782
Centisome position: 76.09
GC content: 37.98
Gene sequence:
>753_bases ATGAGTTCATTTAAACAAACCCAATCAGGTGTTCAATATTTTGTGAAAGGGATGTCACTTGCAATGACCCCAGGTATTCG ACGCTTTATCTTTATTCCCCTACTGATAAACTTTATTTTATTAGGCGGTTCATTTTTTTATCTATTCAACCAAATTGGTG GATGGATCGAACAAATTCTAGCCCAAATACCGAGTTGGTTAGATTGGTTATCGTATTTACTATGGCCTTTCATTGTCATT AGTATTCTTGCGGTATTTTCCTATTTCTTTAGTACGATTGCGAATTGGATTGCGGCACCATTTAATGGCTTACTAGCGGA GCATTTAGAAGCAAAATTAACCAATCAACCTGCGCCTGACGGTGGGGTCATTGACGCATTAAAAGATTTCCCGCGGATCT TTAAACGTGAATGGCAAAAACTGAAATATTATCTACCTAAAGCGCTAGGCTTGTTTATTCTCTTCTTTATTCCGGCAATA GGACAAAGTGTGGTTCCTATTCTTTGGTTCTTGTTTACGGCTTGGATGATGGCAATTCAATATTGCGATTATCCATTTGA TAACCATAAAGTACCATTCGAAGTGATGAGAGATGATTTAAAAACAAAGCGCGGTAAATGCCTATCATTTGGTTCGCTAG TTACTCTCTTTACGATGACCCCTATTCTAAATTTATTTGTAATGCCTATTGCTGTATGTGGCGCAACAGCAATGTGGGTA GATGTTTATCGTGATAAGCACTCTCGCCTTTAA
Upstream 100 bases:
>100_bases AATTGAACAATATCAGTCGCTAAATTATCGGTAATTGCATTTCTTTGTGCGTATTTTTGAGTATAGTGAATAAATGATAC ACAAACTGTAAATATAGATT
Downstream 100 bases:
>100_bases TGCTTAAACCCACATAGAATAAGTTCATCTATATCTTATAACCTTTAGATCCTTTCTCATTTAAGCAACTCTTCGTATTC TAGATAGGTCGAGTTGCTCA
Product: sulfate transport protein CysZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MSSFKQTQSGVQYFVKGMSLAMTPGIRRFIFIPLLINFILLGGSFFYLFNQIGGWIEQILAQIPSWLDWLSYLLWPFIVI SILAVFSYFFSTIANWIAAPFNGLLAEHLEAKLTNQPAPDGGVIDALKDFPRIFKREWQKLKYYLPKALGLFILFFIPAI GQSVVPILWFLFTAWMMAIQYCDYPFDNHKVPFEVMRDDLKTKRGKCLSFGSLVTLFTMTPILNLFVMPIAVCGATAMWV DVYRDKHSRL
Sequences:
>Translated_250_residues MSSFKQTQSGVQYFVKGMSLAMTPGIRRFIFIPLLINFILLGGSFFYLFNQIGGWIEQILAQIPSWLDWLSYLLWPFIVI SILAVFSYFFSTIANWIAAPFNGLLAEHLEAKLTNQPAPDGGVIDALKDFPRIFKREWQKLKYYLPKALGLFILFFIPAI GQSVVPILWFLFTAWMMAIQYCDYPFDNHKVPFEVMRDDLKTKRGKCLSFGSLVTLFTMTPILNLFVMPIAVCGATAMWV DVYRDKHSRL >Mature_249_residues SSFKQTQSGVQYFVKGMSLAMTPGIRRFIFIPLLINFILLGGSFFYLFNQIGGWIEQILAQIPSWLDWLSYLLWPFIVIS ILAVFSYFFSTIANWIAAPFNGLLAEHLEAKLTNQPAPDGGVIDALKDFPRIFKREWQKLKYYLPKALGLFILFFIPAIG QSVVPILWFLFTAWMMAIQYCDYPFDNHKVPFEVMRDDLKTKRGKCLSFGSLVTLFTMTPILNLFVMPIAVCGATAMWVD VYRDKHSRL
Specific function: Possibly involved in sulfate transport [H]
COG id: COG2981
COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CysZ family [H]
Homologues:
Organism=Escherichia coli, GI1788753, Length=249, Percent_Identity=63.0522088353414, Blast_Score=342, Evalue=2e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022985 - InterPro: IPR007496 [H]
Pfam domain/function: PF04401 DUF540 [H]
EC number: NA
Molecular weight: Translated: 28786; Mature: 28654
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFKQTQSGVQYFVKGMSLAMTPGIRRFIFIPLLINFILLGGSFFYLFNQIGGWIEQIL CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQIPSWLDWLSYLLWPFIVISILAVFSYFFSTIANWIAAPFNGLLAEHLEAKLTNQPAPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGVIDALKDFPRIFKREWQKLKYYLPKALGLFILFFIPAIGQSVVPILWFLFTAWMMAIQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH YCDYPFDNHKVPFEVMRDDLKTKRGKCLSFGSLVTLFTMTPILNLFVMPIAVCGATAMWV HHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVYRDKHSRL HHHHHHHCCC >Mature Secondary Structure SSFKQTQSGVQYFVKGMSLAMTPGIRRFIFIPLLINFILLGGSFFYLFNQIGGWIEQIL CCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQIPSWLDWLSYLLWPFIVISILAVFSYFFSTIANWIAAPFNGLLAEHLEAKLTNQPAPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGVIDALKDFPRIFKREWQKLKYYLPKALGLFILFFIPAIGQSVVPILWFLFTAWMMAIQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH YCDYPFDNHKVPFEVMRDDLKTKRGKCLSFGSLVTLFTMTPILNLFVMPIAVCGATAMWV HHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVYRDKHSRL HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA