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The map label for this gene is flaC [H]

Identifier: 209695749

GI number: 209695749

Start: 2492863

End: 2494071

Strand: Reverse

Name: flaC [H]

Synonym: VSAL_I2319

Alternate gene names: 209695749

Gene position: 2494071-2492863 (Counterclockwise)

Preceding gene: 209695751

Following gene: 209695748

Centisome position: 75.01

GC content: 42.1

Gene sequence:

>1209_bases
TTGGTAGCACCGAATAATGAAGCTCAGTTTTCCGAACTCCGGAAAACAATCGGAAAACTAAACGGAGATACCACTATGTC
GATTACAGTAAATACGAACGTATCAGCGATGACGGCTCAGCGTTACTTGAACAATGCAACAGATGGCGTAAATAAATCAA
TGGAACGCTTATCTTCTGGCTATAAAATTAACAGCGCGAAAGACGATGCGGCTGGTTTGCAAATTTCAAACCGCTTAACG
TCACAATCTCGTGGCTTAGATGTTGCTGTTCGTAATGCTAACGATGGTATTTCTATTGCACAAACCGCAGAAGGGGCGAT
GAATGAGTCAACCAACATTCTGCAACGTATGCGTGATTTATCGCTTCAATCTTCAAATGGATCAAATACCACGTCTGATC
GTGAAGCGATTCAGCAAGAAGTGGGTGCATTGAATGATGAACTAAACCGAATTGCAGAAACAACGTCATTTGGTGGCTCA
CGTCTTCTTAATGGTCAGTTTGGTACTAAGTCTTTCCAAATCGGTGCTGATTCTGGTGAAGCCGTCATGCTGAATTTAAG
TAACATGCGTTCAGATTCTGCATCAATGGGTGGCACAAGCTATAAGGCAGAAACAGAGCTTGGTGCTGGTTGGGCAGTTA
ATGCTGAAAATTCAGAATTAAAAGTCTCGTTTTTAAATAAAGCAGGCGAAGAGAAAGAGCTAACTATTAATGCGAAAGCT
GGCGATGACATTGAGCAAGTTGCGACTTACATTAATGGTCAAACGGATTCTATTAATGCCTCTGTCTCAGAAAAGGGTGA
GCTTCAGATTGTGACCTCTAATGATAAAGTGAAAGGTGAAGTAAGCTTCGGTGGTTCTCTTGCTGGCGAACTAAAAATGG
GCGCAGCTCAAGCTGAAACCGTAAAAAGTATTGATGTAACGACAGTGGGGGGCTCTCAGAAGTCAGTGGCGATACTGGAT
GCGGCAATGCAGTTTGTTGATTCTAATCGTGCCGATTTAGGGGCATTCCAAAACCGCTTTAGTCACGCGATTTCTAACTT
AGATAGTATTAATGAAAACGTATCTGCGTCTAATAGCCGTATTAAAGATGTCGATTTTGCAAAAGAAACGACAGAGATGA
CAAAAGCTCAAATTCTTCAACAAGCAAGTTCGTCTATTTTAGCTCAAGCTAAGCAAGCGCCAAACGCAGCTCTTGGTCTA
TTAAGATAG

Upstream 100 bases:

>100_bases
CGATCATGGTTCATAAAGTAATCGGTTATTTTATAAAGAAAACAATAAAGGTTTATTTTTAACCGTCGCTAAATTAAGTA
TCAGGGGCTACTGGTTAGGA

Downstream 100 bases:

>100_bases
TCGACAGTGAAAAGCTTCTAAGGTAATAGTGCTCTCACACTATGCCAAAGCCGGGGATTACCTCGGCTTTTTTATGCTTT
TTATTTCATTATTTTGTTTT

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MVAPNNEAQFSELRKTIGKLNGDTTMSITVNTNVSAMTAQRYLNNATDGVNKSMERLSSGYKINSAKDDAAGLQISNRLT
SQSRGLDVAVRNANDGISIAQTAEGAMNESTNILQRMRDLSLQSSNGSNTTSDREAIQQEVGALNDELNRIAETTSFGGS
RLLNGQFGTKSFQIGADSGEAVMLNLSNMRSDSASMGGTSYKAETELGAGWAVNAENSELKVSFLNKAGEEKELTINAKA
GDDIEQVATYINGQTDSINASVSEKGELQIVTSNDKVKGEVSFGGSLAGELKMGAAQAETVKSIDVTTVGGSQKSVAILD
AAMQFVDSNRADLGAFQNRFSHAISNLDSINENVSASNSRIKDVDFAKETTEMTKAQILQQASSSILAQAKQAPNAALGL
LR

Sequences:

>Translated_402_residues
MVAPNNEAQFSELRKTIGKLNGDTTMSITVNTNVSAMTAQRYLNNATDGVNKSMERLSSGYKINSAKDDAAGLQISNRLT
SQSRGLDVAVRNANDGISIAQTAEGAMNESTNILQRMRDLSLQSSNGSNTTSDREAIQQEVGALNDELNRIAETTSFGGS
RLLNGQFGTKSFQIGADSGEAVMLNLSNMRSDSASMGGTSYKAETELGAGWAVNAENSELKVSFLNKAGEEKELTINAKA
GDDIEQVATYINGQTDSINASVSEKGELQIVTSNDKVKGEVSFGGSLAGELKMGAAQAETVKSIDVTTVGGSQKSVAILD
AAMQFVDSNRADLGAFQNRFSHAISNLDSINENVSASNSRIKDVDFAKETTEMTKAQILQQASSSILAQAKQAPNAALGL
LR
>Mature_402_residues
MVAPNNEAQFSELRKTIGKLNGDTTMSITVNTNVSAMTAQRYLNNATDGVNKSMERLSSGYKINSAKDDAAGLQISNRLT
SQSRGLDVAVRNANDGISIAQTAEGAMNESTNILQRMRDLSLQSSNGSNTTSDREAIQQEVGALNDELNRIAETTSFGGS
RLLNGQFGTKSFQIGADSGEAVMLNLSNMRSDSASMGGTSYKAETELGAGWAVNAENSELKVSFLNKAGEEKELTINAKA
GDDIEQVATYINGQTDSINASVSEKGELQIVTSNDKVKGEVSFGGSLAGELKMGAAQAETVKSIDVTTVGGSQKSVAILD
AAMQFVDSNRADLGAFQNRFSHAISNLDSINENVSASNSRIKDVDFAKETTEMTKAQILQQASSSILAQAKQAPNAALGL
LR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. FlaA is not essential for polar flagellar synthesis and swimming motility. Homopolymer of flaA is able to form a functional filament [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=177, Percent_Identity=42.3728813559322, Blast_Score=137, Evalue=1e-33,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR010810 [H]

Pfam domain/function: PF00700 Flagellin_C; PF07196 Flagellin_IN; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 42479; Mature: 42479

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAPNNEAQFSELRKTIGKLNGDTTMSITVNTNVSAMTAQRYLNNATDGVNKSMERLSSG
CCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHCC
YKINSAKDDAAGLQISNRLTSQSRGLDVAVRNANDGISIAQTAEGAMNESTNILQRMRDL
CEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCEEHHHHCCCCCHHHHHHHHHHHC
SLQSSNGSNTTSDREAIQQEVGALNDELNRIAETTSFGGSRLLNGQFGTKSFQIGADSGE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCCC
AVMLNLSNMRSDSASMGGTSYKAETELGAGWAVNAENSELKVSFLNKAGEEKELTINAKA
EEEEEECCCCCCCCCCCCCCEECCCCCCCCEEECCCCCEEEEEEHHCCCCCCEEEEECCC
GDDIEQVATYINGQTDSINASVSEKGELQIVTSNDKVKGEVSFGGSLAGELKMGAAQAET
CCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHCCCHHHHH
VKSIDVTTVGGSQKSVAILDAAMQFVDSNRADLGAFQNRFSHAISNLDSINENVSASNSR
HHEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
IKDVDFAKETTEMTKAQILQQASSSILAQAKQAPNAALGLLR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
>Mature Secondary Structure
MVAPNNEAQFSELRKTIGKLNGDTTMSITVNTNVSAMTAQRYLNNATDGVNKSMERLSSG
CCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHCC
YKINSAKDDAAGLQISNRLTSQSRGLDVAVRNANDGISIAQTAEGAMNESTNILQRMRDL
CEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCEEHHHHCCCCCHHHHHHHHHHHC
SLQSSNGSNTTSDREAIQQEVGALNDELNRIAETTSFGGSRLLNGQFGTKSFQIGADSGE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCCC
AVMLNLSNMRSDSASMGGTSYKAETELGAGWAVNAENSELKVSFLNKAGEEKELTINAKA
EEEEEECCCCCCCCCCCCCCEECCCCCCCCEEECCCCCEEEEEEHHCCCCCCEEEEECCC
GDDIEQVATYINGQTDSINASVSEKGELQIVTSNDKVKGEVSFGGSLAGELKMGAAQAET
CCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHCCCHHHHH
VKSIDVTTVGGSQKSVAILDAAMQFVDSNRADLGAFQNRFSHAISNLDSINENVSASNSR
HHEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
IKDVDFAKETTEMTKAQILQQASSSILAQAKQAPNAALGLLR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7883718; 12620739 [H]