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The map label for this gene is flaD [H]

Identifier: 209695748

GI number: 209695748

Start: 2491276

End: 2492403

Strand: Reverse

Name: flaD [H]

Synonym: VSAL_I2318

Alternate gene names: 209695748

Gene position: 2492403-2491276 (Counterclockwise)

Preceding gene: 209695749

Following gene: 209695747

Centisome position: 74.96

GC content: 42.55

Gene sequence:

>1128_bases
ATGGCTATAAATGTAAACACAAACGTATCAGCAATGACGGCACAGCGTTACTTAAACAACGCAACTAACGACCTAAACAG
CTCAATGGAGCGTTTGTCTTCAGGTCTTAAAATTAACAGTGCAAAAGATGATGCGGCTGGCCTACAAATTTCAAATCGTC
TAACTTCTCAAACTCGCGGCTTAGATGTTGCAGTTCGAAATGCAAACGATGGTATCTCAATGGCGCAAACTGCTGAAGGC
GCGATGAACGAAACAACGAACATCCTTCAACGTATGCGCGATTTATCACTTCAATCTTCAAACGGTTCAAATACATCAGC
TGACCGTGGCGCAATTCAAGAAGAAGTGGTTGCTTTGAATGACGAGTTAAACCGTATTGCAGAAACAACGTCATTTGGTG
GTTCTCGCCTACTGAATGGTCAATTTGGTACTAAGTCTTTCCAAATCGGTTCAGATTCAGGTGAAGCAGTAATGCTAACA
CTGAATAACATGCGCTCTGATACGACAGATATGGGTGGTTCAACTTACTCAGCGACTGAAGGCAAAGATTCAAGCTGGAA
AGTAGGCGCTGAGAACTCAGAATTAACAATGAATTTTGTTGATAAAGACGGCAAAGAGCAAAACATCTCAATCAATGCGA
AAACTGGCGACGACATTGAAGAAGTAGCGACTTACATCAATGGTCAAAGTAACGCGATAAACGCATCTGTTACCGGTGAA
GGCAAACTGCAAGTATTTGCATCTGCTGACGCGAGTGATATTAAATTTGGTGGTTCACTAAGCAGTGAATTAGGTATGGG
TAACAAGGTTGCCGATACAGTAAAAAGCATCGATGTCACAACCGTAGGTGGCTCACAAAAAGCCGTTGCGATTCTTGATT
CAGCAATGCAATACGTTGATTCAAACCGTGCAGACCTTGGTGCTTTCCAAAACCGCTTTGGCCACGCTATCAGCAACTTA
GAAAATATTAATGAGAACGTTAATGCGTCTAACAGCCAAATCAAAGATGTTGATTTTGCTAAAGAAACGACAGCAATGAC
GAAAGCTCAAATCCTGCAACAAGCGAGCTCTTCAATTCTAGCTCAAGCTAAGCAGGCACCAAATGCAGCATTAGGCCTGT
TGGGCTAA

Upstream 100 bases:

>100_bases
TAATTTGAAATCAGGTCGTTAAGTTAAGTACTAACGATGATTAATACGGTTTCCAATCCAGGAGCGGAGTGGTTCGAAAC
CAAAGCGGAGATATAAGATT

Downstream 100 bases:

>100_bases
TCAGCATAGTAAATACTTGTGAGAATGGGCGTTTATGCGACACGCTGGATACCTTCCCAACAGCTCATGAGTAAGTCTGA
CTTACTTTTAAACATTAAAC

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MAINVNTNVSAMTAQRYLNNATNDLNSSMERLSSGLKINSAKDDAAGLQISNRLTSQTRGLDVAVRNANDGISMAQTAEG
AMNETTNILQRMRDLSLQSSNGSNTSADRGAIQEEVVALNDELNRIAETTSFGGSRLLNGQFGTKSFQIGSDSGEAVMLT
LNNMRSDTTDMGGSTYSATEGKDSSWKVGAENSELTMNFVDKDGKEQNISINAKTGDDIEEVATYINGQSNAINASVTGE
GKLQVFASADASDIKFGGSLSSELGMGNKVADTVKSIDVTTVGGSQKAVAILDSAMQYVDSNRADLGAFQNRFGHAISNL
ENINENVNASNSQIKDVDFAKETTAMTKAQILQQASSSILAQAKQAPNAALGLLG

Sequences:

>Translated_375_residues
MAINVNTNVSAMTAQRYLNNATNDLNSSMERLSSGLKINSAKDDAAGLQISNRLTSQTRGLDVAVRNANDGISMAQTAEG
AMNETTNILQRMRDLSLQSSNGSNTSADRGAIQEEVVALNDELNRIAETTSFGGSRLLNGQFGTKSFQIGSDSGEAVMLT
LNNMRSDTTDMGGSTYSATEGKDSSWKVGAENSELTMNFVDKDGKEQNISINAKTGDDIEEVATYINGQSNAINASVTGE
GKLQVFASADASDIKFGGSLSSELGMGNKVADTVKSIDVTTVGGSQKAVAILDSAMQYVDSNRADLGAFQNRFGHAISNL
ENINENVNASNSQIKDVDFAKETTAMTKAQILQQASSSILAQAKQAPNAALGLLG
>Mature_374_residues
AINVNTNVSAMTAQRYLNNATNDLNSSMERLSSGLKINSAKDDAAGLQISNRLTSQTRGLDVAVRNANDGISMAQTAEGA
MNETTNILQRMRDLSLQSSNGSNTSADRGAIQEEVVALNDELNRIAETTSFGGSRLLNGQFGTKSFQIGSDSGEAVMLTL
NNMRSDTTDMGGSTYSATEGKDSSWKVGAENSELTMNFVDKDGKEQNISINAKTGDDIEEVATYINGQSNAINASVTGEG
KLQVFASADASDIKFGGSLSSELGMGNKVADTVKSIDVTTVGGSQKAVAILDSAMQYVDSNRADLGAFQNRFGHAISNLE
NINENVNASNSQIKDVDFAKETTAMTKAQILQQASSSILAQAKQAPNAALGLLG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. FlaA is not essential for polar flagellar synthesis and swimming motility. Homopolymer of flaA is able to form a functional filament [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=173, Percent_Identity=43.9306358381503, Blast_Score=139, Evalue=4e-34,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR010810 [H]

Pfam domain/function: PF00700 Flagellin_C; PF07196 Flagellin_IN; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 39458; Mature: 39327

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAINVNTNVSAMTAQRYLNNATNDLNSSMERLSSGLKINSAKDDAAGLQISNRLTSQTRG
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHCC
LDVAVRNANDGISMAQTAEGAMNETTNILQRMRDLSLQSSNGSNTSADRGAIQEEVVALN
CEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
DELNRIAETTSFGGSRLLNGQFGTKSFQIGSDSGEAVMLTLNNMRSDTTDMGGSTYSATE
HHHHHHHHHHCCCCCEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCEEECCC
GKDSSWKVGAENSELTMNFVDKDGKEQNISINAKTGDDIEEVATYINGQSNAINASVTGE
CCCCCEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCC
GKLQVFASADASDIKFGGSLSSELGMGNKVADTVKSIDVTTVGGSQKAVAILDSAMQYVD
CEEEEEECCCCCCEEECCCCHHHCCCCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHH
SNRADLGAFQNRFGHAISNLENINENVNASNSQIKDVDFAKETTAMTKAQILQQASSSIL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AQAKQAPNAALGLLG
HHHHHCCCCHHCCCC
>Mature Secondary Structure 
AINVNTNVSAMTAQRYLNNATNDLNSSMERLSSGLKINSAKDDAAGLQISNRLTSQTRG
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHCC
LDVAVRNANDGISMAQTAEGAMNETTNILQRMRDLSLQSSNGSNTSADRGAIQEEVVALN
CEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
DELNRIAETTSFGGSRLLNGQFGTKSFQIGSDSGEAVMLTLNNMRSDTTDMGGSTYSATE
HHHHHHHHHHCCCCCEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCEEECCC
GKDSSWKVGAENSELTMNFVDKDGKEQNISINAKTGDDIEEVATYINGQSNAINASVTGE
CCCCCEEECCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCC
GKLQVFASADASDIKFGGSLSSELGMGNKVADTVKSIDVTTVGGSQKAVAILDSAMQYVD
CEEEEEECCCCCCEEECCCCHHHCCCCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHH
SNRADLGAFQNRFGHAISNLENINENVNASNSQIKDVDFAKETTAMTKAQILQQASSSIL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AQAKQAPNAALGLLG
HHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7883718; 12620739 [H]