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The map label for this gene is yjdF [H]

Identifier: 209695703

GI number: 209695703

Start: 2446974

End: 2447582

Strand: Direct

Name: yjdF [H]

Synonym: VSAL_I2271

Alternate gene names: 209695703

Gene position: 2446974-2447582 (Clockwise)

Preceding gene: 209695702

Following gene: 209695726

Centisome position: 73.59

GC content: 37.93

Gene sequence:

>609_bases
ATGTCGATTTCTATGACTCTTAAAAAGCAGCCTATTTTTCTCGTATTAACCAATATTTATTTCATCGTTTTATTGTTCTC
AGCAATTGAGCCTTCATCACGAGCCGTTTGGTTTGCCGAAATCTTACCAGCCCTACTCATTTTAATAGGAATTTATTACG
TATCCCTTCGATTTACGTTCAGTAAAACCGCCTATGTCTTAATGTTTATCTGGCTTATTCTTCATACCATCGGCGCTAAA
TATACGTTTGCTGATGTTCCCTTTGATTGGTTTAATCAATTGATCGGTTCTGACCGTAATAACTTTGATCGGGTCGCTCA
TTTCTCTATTGGTTTTTACGCTTACCCGATTGCAGAATATTTGATTAAAACAAAAAAATGTTCTGCTCCACTTGCCATGT
TATTCGGTTTATTTACATTAATGAGTGTTGCTGCAGGCTATGAAATTATTGAATGGTGGTACGCGGCAGTTGCAGGAGGA
GAAGAAGGCATCGCTTTCTTAGGATCTCAAGGCGATATCTGGGATGCTCAAAAGGACATGTTATGTGACACTTCAGGATC
ACTCGTCGCTTTATTATTGATGATGGTTCAACGTAAAAAGAATAACTAG

Upstream 100 bases:

>100_bases
CTTTCATTGATCTCATTACCTCGCCCCTATACTTGTCCCATAATTCATTAACGCTACAATTACCTTAGTCTTTTATTCAA
ACATTCAGGTGTGATTAATC

Downstream 100 bases:

>100_bases
AGTTCAGGCAGTATTTGCTCTGAACTCTGAACAGATCAATTATTCATCAATTTCATCTAAGAAGTCATTTAAGTCTTCTT
CTGAATTACTATCACTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSISMTLKKQPIFLVLTNIYFIVLLFSAIEPSSRAVWFAEILPALLILIGIYYVSLRFTFSKTAYVLMFIWLILHTIGAK
YTFADVPFDWFNQLIGSDRNNFDRVAHFSIGFYAYPIAEYLIKTKKCSAPLAMLFGLFTLMSVAAGYEIIEWWYAAVAGG
EEGIAFLGSQGDIWDAQKDMLCDTSGSLVALLLMMVQRKKNN

Sequences:

>Translated_202_residues
MSISMTLKKQPIFLVLTNIYFIVLLFSAIEPSSRAVWFAEILPALLILIGIYYVSLRFTFSKTAYVLMFIWLILHTIGAK
YTFADVPFDWFNQLIGSDRNNFDRVAHFSIGFYAYPIAEYLIKTKKCSAPLAMLFGLFTLMSVAAGYEIIEWWYAAVAGG
EEGIAFLGSQGDIWDAQKDMLCDTSGSLVALLLMMVQRKKNN
>Mature_201_residues
SISMTLKKQPIFLVLTNIYFIVLLFSAIEPSSRAVWFAEILPALLILIGIYYVSLRFTFSKTAYVLMFIWLILHTIGAKY
TFADVPFDWFNQLIGSDRNNFDRVAHFSIGFYAYPIAEYLIKTKKCSAPLAMLFGLFTLMSVAAGYEIIEWWYAAVAGGE
EGIAFLGSQGDIWDAQKDMLCDTSGSLVALLLMMVQRKKNN

Specific function: Unknown

COG id: COG3647

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790562, Length=198, Percent_Identity=28.7878787878788, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014509 [H]

Pfam domain/function: PF09997 DUF2238 [H]

EC number: NA

Molecular weight: Translated: 22865; Mature: 22734

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISMTLKKQPIFLVLTNIYFIVLLFSAIEPSSRAVWFAEILPALLILIGIYYVSLRFTF
CCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
SKTAYVLMFIWLILHTIGAKYTFADVPFDWFNQLIGSDRNNFDRVAHFSIGFYAYPIAEY
HHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LIKTKKCSAPLAMLFGLFTLMSVAAGYEIIEWWYAAVAGGEEGIAFLGSQGDIWDAQKDM
HHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHH
LCDTSGSLVALLLMMVQRKKNN
HCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SISMTLKKQPIFLVLTNIYFIVLLFSAIEPSSRAVWFAEILPALLILIGIYYVSLRFTF
CCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
SKTAYVLMFIWLILHTIGAKYTFADVPFDWFNQLIGSDRNNFDRVAHFSIGFYAYPIAEY
HHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LIKTKKCSAPLAMLFGLFTLMSVAAGYEIIEWWYAAVAGGEEGIAFLGSQGDIWDAQKDM
HHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHH
LCDTSGSLVALLLMMVQRKKNN
HCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 2656658 [H]