Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695694

Identifier: 209695694

GI number: 209695694

Start: 2433354

End: 2433596

Strand: Direct

Name: 209695694

Synonym: VSAL_I2259

Alternate gene names: NA

Gene position: 2433354-2433596 (Clockwise)

Preceding gene: 209695693

Following gene: 209695695

Centisome position: 73.18

GC content: 39.92

Gene sequence:

>243_bases
ATGATACTCACTGAGCTTAAGCAATATATTGATGAAGAGGGTCGGGTTGAAAGACTGACTCTCGCGAAAAAGTTCAGTAT
GAGTGAAGATGGTGTTGATGCAATGCTTGATCTATGGGTAAAAAAAGGAAAGTTAACCCGTGAATTAATCGGTTGTGATA
AGACACAATGCTGCCAAGAAGCCGAGCGTGTTTGGTATCGACCGGTTTATAAAGATGAGTTAATGACCACTTACATACGA
TAA

Upstream 100 bases:

>100_bases
GCAGTATGTGGATTGCGATTTCACTAGCTGCAATGGCTGTAACTTATTTAGCGTTGAAGAGAAAGAGTCGAGAGGTTGAA
AACCAAGAGGCGGCATTAGT

Downstream 100 bases:

>100_bases
TCATCCAGTTTACAGTAGGATGATAAATAAAAACGAGAGCCAATAGGTTCTCGTTTTTTTATGGGCGAAAGGTAAGCGTG
CGGGGAACTACACCTAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MILTELKQYIDEEGRVERLTLAKKFSMSEDGVDAMLDLWVKKGKLTRELIGCDKTQCCQEAERVWYRPVYKDELMTTYIR

Sequences:

>Translated_80_residues
MILTELKQYIDEEGRVERLTLAKKFSMSEDGVDAMLDLWVKKGKLTRELIGCDKTQCCQEAERVWYRPVYKDELMTTYIR
>Mature_80_residues
MILTELKQYIDEEGRVERLTLAKKFSMSEDGVDAMLDLWVKKGKLTRELIGCDKTQCCQEAERVWYRPVYKDELMTTYIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9510; Mature: 9510

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTELKQYIDEEGRVERLTLAKKFSMSEDGVDAMLDLWVKKGKLTRELIGCDKTQCCQE
CCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHH
AERVWYRPVYKDELMTTYIR
HHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MILTELKQYIDEEGRVERLTLAKKFSMSEDGVDAMLDLWVKKGKLTRELIGCDKTQCCQE
CCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHH
AERVWYRPVYKDELMTTYIR
HHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA