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The map label for this gene is asmA [H]

Identifier: 209695665

GI number: 209695665

Start: 2396081

End: 2398240

Strand: Direct

Name: asmA [H]

Synonym: VSAL_I2229

Alternate gene names: 209695665

Gene position: 2396081-2398240 (Clockwise)

Preceding gene: 209695664

Following gene: 209695667

Centisome position: 72.06

GC content: 35.23

Gene sequence:

>2160_bases
ATGGATTTGGCCGTGAAGAAAATAGTCTTATTAATTAGCATTCCGTTTATTGCAATTGTTATCGCATTATTAGTGCTGGT
ATTAGTTGTTAACCCTAATCAATTCAAACCATTAATTAAAGAACAAGTAGAGCAGCAAACTGGTCGTCAACTGACTATGG
ATGGTGATATCTCTTGGCGTTTCTTCCCTTCTATTGGTTTTTCAATCGGTAATATGGCATTAAGCAATCCAACTGGGTTT
GCTACGGCTAATTTAGTGAAATTTGATAATGCCAATATAGACATCAATGTGCTTCCATTGTTTGATCACGAGATTAATAT
TGGATTGATTACGTTAGATGGGGCTGCTTTTACACTACATACATTAAAAAGTGGTGTAACAAATCTTGATGGCATCGGTC
CTAAGGAAGAGATTTCAGTTGCTGAAAATAAAACTGAAATAAAGAATGAAGACGTTACGACTAGTGATAATTTAAACGCC
GAAGCTGCAACTACAGCGCCTGAAATTAATAGTTGGACCGTCAGTTTAGAGGGGATTGCATTAACTAATGCGAGTGCGCT
TATTCAAGATGACAAAGCGGGCACAAAAACGCAATTGTCTAATATGAATATCAAGCTATCACAATTCAGTCCTGGAGAAT
GGACGCACTTAACGTTTGATTTGAAGGCAGATCTTGGTCAACAGAAAATAGCTCTGAAGGGAGAAACGGACCTTAATATT
GCTAAGACGTTAGATACCGCATCATTAAAAGAAACTGAATTAGTTGTTTCTTATGCGGATAAGACGAATAAGTTTGATGG
TATTACATTAAGGATAGATAAATTTAATTTTGATGAATGGTCAACTCTCGAATTAGTGGCGGCGGGTAAAGCGAATGATA
TGACTGTAGATTCAAAATCAACGTTTGAATTGAACGTCCCAAAAGCACTCGATATTATTAAAATACGTAAATTTATAAGT
ACAAACAATGTAATAGGTGATGCACTTCCAAATAAAGACGTCACTGCCATTATTGGTTTTAATAGTTCTTTTGATGTCAC
TAAATCATTATTACAAGTCACTGATTTAACGCTTTCTGCGGTAGATACTCAATTTGATGGAAAGGCGAGTGTTGAGCTTA
AGGGCATTCCTAAAGTGAGGTTTGAGTTACATAGCCCTAGCATAGATGTTGATGCTTTATTAGCGACGTTGCCATCATCA
AAGAATACAGTAGTTGATAATAAACAAACGAATACGAGTAATGTTAAAAAATCCACACCAGTGAAAGAAATTGAACCAGA
CTTAAATGCATTAAAAGGATTGGATGTTGCGGGTAAGATTACCATTGATCGTTTTAAAGCAAATAATGCAAAAATGCAAA
ATGTACAATCGCAATTTTCTGTGAATCGTGGAGTATTGAATTTATCTAAATTTCATTCAACTCTTTATGATGGCAGCATT
GATATGACAGCTAAATTAGATGCTCGTAAGTCAATACCCGTATATAGCATGAAAAACACCATTAAAGGAGTTAAAGTTGC
GCCTTTATTGATAGATGTTATGGGCGAGAGTTTAGTTGAAGGTACTGGTAATATTACGATAAATGTATCTGGAAAAAGTT
TAAAACCGACGGCATTAAAGCAAAATGTTAAAGGTAAAGTAGCTATTAATTTTGCCGATGGTGCCGTGAATGGAATTAAC
GTTCCCCTTATGATTCGAACCACTTATGCAAAAGTTAAAGGTGAGAAAATTAAAGGCAGTGATGAAGCTGAAAAAACAGA
TTTTAGTGCATTAACCGCAAGTTTCTTATTAGAAAACGGAAATGCCACTACAAATAATATTCGTATGGTATCTCCATTAT
TACGTATTCATGGGGAAGGTTCTGCACAGTACGTGAATAAAACGGCGAATATGCTTATTGAAACGTCGATTGTAGGTTCA
TTAAAAGGACAGGGTGGCAAGAGTATCGATGATTTGAAAGACGTTACTATTCCTATTCGTATTACAGGTTCTTGGGCTAA
CCCTAAATATAAGCTTGAATTTGGTGATGTAATGCAACAGAAAGCCAAAAAAGAACTTGATCGCGGTATTGAGAAATTAG
AAGCAAAATACGGCGATAAAATTAAAGATGAAAAAGTAAAAGATGCAGCAAATAAATTGCTAAAAGGATTATTTAACTAG

Upstream 100 bases:

>100_bases
ATTGTCTATATTTAGGTATATAACTATAAATAACTCTATGTTTATTATGTGCTAATAGTGCCATAATTAACATTCACATC
ACTTTTTTTATACACTCTGG

Downstream 100 bases:

>100_bases
TTCTCTCTTTTATATAAAAGCCCATATTGATGAAGATTAATATGGGCTTTTTAATTGTAATATAGTGATTACCAATCAAT
TCCTTTTAATGCTTTTACGC

Product: outer membrane assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 719; Mature: 719

Protein sequence:

>719_residues
MDLAVKKIVLLISIPFIAIVIALLVLVLVVNPNQFKPLIKEQVEQQTGRQLTMDGDISWRFFPSIGFSIGNMALSNPTGF
ATANLVKFDNANIDINVLPLFDHEINIGLITLDGAAFTLHTLKSGVTNLDGIGPKEEISVAENKTEIKNEDVTTSDNLNA
EAATTAPEINSWTVSLEGIALTNASALIQDDKAGTKTQLSNMNIKLSQFSPGEWTHLTFDLKADLGQQKIALKGETDLNI
AKTLDTASLKETELVVSYADKTNKFDGITLRIDKFNFDEWSTLELVAAGKANDMTVDSKSTFELNVPKALDIIKIRKFIS
TNNVIGDALPNKDVTAIIGFNSSFDVTKSLLQVTDLTLSAVDTQFDGKASVELKGIPKVRFELHSPSIDVDALLATLPSS
KNTVVDNKQTNTSNVKKSTPVKEIEPDLNALKGLDVAGKITIDRFKANNAKMQNVQSQFSVNRGVLNLSKFHSTLYDGSI
DMTAKLDARKSIPVYSMKNTIKGVKVAPLLIDVMGESLVEGTGNITINVSGKSLKPTALKQNVKGKVAINFADGAVNGIN
VPLMIRTTYAKVKGEKIKGSDEAEKTDFSALTASFLLENGNATTNNIRMVSPLLRIHGEGSAQYVNKTANMLIETSIVGS
LKGQGGKSIDDLKDVTIPIRITGSWANPKYKLEFGDVMQQKAKKELDRGIEKLEAKYGDKIKDEKVKDAANKLLKGLFN

Sequences:

>Translated_719_residues
MDLAVKKIVLLISIPFIAIVIALLVLVLVVNPNQFKPLIKEQVEQQTGRQLTMDGDISWRFFPSIGFSIGNMALSNPTGF
ATANLVKFDNANIDINVLPLFDHEINIGLITLDGAAFTLHTLKSGVTNLDGIGPKEEISVAENKTEIKNEDVTTSDNLNA
EAATTAPEINSWTVSLEGIALTNASALIQDDKAGTKTQLSNMNIKLSQFSPGEWTHLTFDLKADLGQQKIALKGETDLNI
AKTLDTASLKETELVVSYADKTNKFDGITLRIDKFNFDEWSTLELVAAGKANDMTVDSKSTFELNVPKALDIIKIRKFIS
TNNVIGDALPNKDVTAIIGFNSSFDVTKSLLQVTDLTLSAVDTQFDGKASVELKGIPKVRFELHSPSIDVDALLATLPSS
KNTVVDNKQTNTSNVKKSTPVKEIEPDLNALKGLDVAGKITIDRFKANNAKMQNVQSQFSVNRGVLNLSKFHSTLYDGSI
DMTAKLDARKSIPVYSMKNTIKGVKVAPLLIDVMGESLVEGTGNITINVSGKSLKPTALKQNVKGKVAINFADGAVNGIN
VPLMIRTTYAKVKGEKIKGSDEAEKTDFSALTASFLLENGNATTNNIRMVSPLLRIHGEGSAQYVNKTANMLIETSIVGS
LKGQGGKSIDDLKDVTIPIRITGSWANPKYKLEFGDVMQQKAKKELDRGIEKLEAKYGDKIKDEKVKDAANKLLKGLFN
>Mature_719_residues
MDLAVKKIVLLISIPFIAIVIALLVLVLVVNPNQFKPLIKEQVEQQTGRQLTMDGDISWRFFPSIGFSIGNMALSNPTGF
ATANLVKFDNANIDINVLPLFDHEINIGLITLDGAAFTLHTLKSGVTNLDGIGPKEEISVAENKTEIKNEDVTTSDNLNA
EAATTAPEINSWTVSLEGIALTNASALIQDDKAGTKTQLSNMNIKLSQFSPGEWTHLTFDLKADLGQQKIALKGETDLNI
AKTLDTASLKETELVVSYADKTNKFDGITLRIDKFNFDEWSTLELVAAGKANDMTVDSKSTFELNVPKALDIIKIRKFIS
TNNVIGDALPNKDVTAIIGFNSSFDVTKSLLQVTDLTLSAVDTQFDGKASVELKGIPKVRFELHSPSIDVDALLATLPSS
KNTVVDNKQTNTSNVKKSTPVKEIEPDLNALKGLDVAGKITIDRFKANNAKMQNVQSQFSVNRGVLNLSKFHSTLYDGSI
DMTAKLDARKSIPVYSMKNTIKGVKVAPLLIDVMGESLVEGTGNITINVSGKSLKPTALKQNVKGKVAINFADGAVNGIN
VPLMIRTTYAKVKGEKIKGSDEAEKTDFSALTASFLLENGNATTNNIRMVSPLLRIHGEGSAQYVNKTANMLIETSIVGS
LKGQGGKSIDDLKDVTIPIRITGSWANPKYKLEFGDVMQQKAKKELDRGIEKLEAKYGDKIKDEKVKDAANKLLKGLFN

Specific function: Involved in the inhibition of assembly of mutant ompF proteins. In general, could be involved in the assembly of outer membrane proteins [H]

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788378, Length=396, Percent_Identity=21.4646464646465, Blast_Score=111, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 78015; Mature: 78015

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLAVKKIVLLISIPFIAIVIALLVLVLVVNPNQFKPLIKEQVEQQTGRQLTMDGDISWR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECCCCEEE
FFPSIGFSIGNMALSNPTGFATANLVKFDNANIDINVLPLFDHEINIGLITLDGAAFTLH
ECCCCCCEECCEEECCCCCCEEEEEEEECCCCEEEEEEEEECCCEEEEEEEECCCEEEHH
TLKSGVTNLDGIGPKEEISVAENKTEIKNEDVTTSDNLNAEAATTAPEINSWTVSLEGIA
HHHCCCCCCCCCCCHHHEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
LTNASALIQDDKAGTKTQLSNMNIKLSQFSPGEWTHLTFDLKADLGQQKIALKGETDLNI
EECCHHEEECCCCCCCEEECCCEEEEEECCCCCEEEEEEEEECCCCCCEEEEECCCCCCH
AKTLDTASLKETELVVSYADKTNKFDGITLRIDKFNFDEWSTLELVAAGKANDMTVDSKS
HHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCEEECCCC
TFELNVPKALDIIKIRKFISTNNVIGDALPNKDVTAIIGFNSSFDVTKSLLQVTDLTLSA
EEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHEEEE
VDTQFDGKASVELKGIPKVRFELHSPSIDVDALLATLPSSKNTVVDNKQTNTSNVKKSTP
ECCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC
VKEIEPDLNALKGLDVAGKITIDRFKANNAKMQNVQSQFSVNRGVLNLSKFHSTLYDGSI
HHHCCCCHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEHHHHHHHHHCCCC
DMTAKLDARKSIPVYSMKNTIKGVKVAPLLIDVMGESLVEGTGNITINVSGKSLKPTALK
EEEEEECCCCCCCEEEHHHHCCCCEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHH
QNVKGKVAINFADGAVNGINVPLMIRTTYAKVKGEKIKGSDEAEKTDFSALTASFLLENG
CCCCCEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHEEEHEEECC
NATTNNIRMVSPLLRIHGEGSAQYVNKTANMLIETSIVGSLKGQGGKSIDDLKDVTIPIR
CCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHEEEEEHHHHCCCCCCCCCCCCCCCEEEEE
ITGSWANPKYKLEFGDVMQQKAKKELDRGIEKLEAKYGDKIKDEKVKDAANKLLKGLFN
EEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLAVKKIVLLISIPFIAIVIALLVLVLVVNPNQFKPLIKEQVEQQTGRQLTMDGDISWR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECCCCEEE
FFPSIGFSIGNMALSNPTGFATANLVKFDNANIDINVLPLFDHEINIGLITLDGAAFTLH
ECCCCCCEECCEEECCCCCCEEEEEEEECCCCEEEEEEEEECCCEEEEEEEECCCEEEHH
TLKSGVTNLDGIGPKEEISVAENKTEIKNEDVTTSDNLNAEAATTAPEINSWTVSLEGIA
HHHCCCCCCCCCCCHHHEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
LTNASALIQDDKAGTKTQLSNMNIKLSQFSPGEWTHLTFDLKADLGQQKIALKGETDLNI
EECCHHEEECCCCCCCEEECCCEEEEEECCCCCEEEEEEEEECCCCCCEEEEECCCCCCH
AKTLDTASLKETELVVSYADKTNKFDGITLRIDKFNFDEWSTLELVAAGKANDMTVDSKS
HHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCEEECCCC
TFELNVPKALDIIKIRKFISTNNVIGDALPNKDVTAIIGFNSSFDVTKSLLQVTDLTLSA
EEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHEEEE
VDTQFDGKASVELKGIPKVRFELHSPSIDVDALLATLPSSKNTVVDNKQTNTSNVKKSTP
ECCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC
VKEIEPDLNALKGLDVAGKITIDRFKANNAKMQNVQSQFSVNRGVLNLSKFHSTLYDGSI
HHHCCCCHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEHHHHHHHHHCCCC
DMTAKLDARKSIPVYSMKNTIKGVKVAPLLIDVMGESLVEGTGNITINVSGKSLKPTALK
EEEEEECCCCCCCEEEHHHHCCCCEEHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHH
QNVKGKVAINFADGAVNGINVPLMIRTTYAKVKGEKIKGSDEAEKTDFSALTASFLLENG
CCCCCEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHEEEHEEECC
NATTNNIRMVSPLLRIHGEGSAQYVNKTANMLIETSIVGSLKGQGGKSIDDLKDVTIPIR
CCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHEEEEEHHHHCCCCCCCCCCCCCCCEEEEE
ITGSWANPKYKLEFGDVMQQKAKKELDRGIEKLEAKYGDKIKDEKVKDAANKLLKGLFN
EEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7476172; 9097040; 9278503; 1324907 [H]