Click here to switch to the map view.

The map label for this gene is hflD

Identifier: 209695633

GI number: 209695633

Start: 2360227

End: 2360844

Strand: Reverse

Name: hflD

Synonym: VSAL_I2196

Alternate gene names: 209695633

Gene position: 2360844-2360227 (Counterclockwise)

Preceding gene: 209695634

Following gene: 209695632

Centisome position: 71.0

GC content: 42.23

Gene sequence:

>618_bases
GTGGCGAACACTTTATTTGACAGAACCATTGCATTTGCTGGCATTTGCCAAGCGGCAAGCTTAGTACAAAAAATGGCGAA
AGATGGGCATTGTGATCAAGCCGCGTTTGATACCGCTATCCAATCTATTTTGGAAACCAATCCAAATAATACGGTAGGTG
TTTACGGGAAAGAAGCCAACTTACGTGTTGGCTTAGAATGCCTTGTACGAGATTTTGATAACACACCAACAGGCAGCGAA
TTAACTCGCTACCTGATCAGTTTAATGGCACTAGAGCGCAAACTTGCAGGTCATCGTGATGGCATGAGTAAGCTTGGTGA
ACGCATCAGTACCATTGAACGCCAATTAGACCATTTTGATATTCATAACGAACAAATGCTCAGTAACATTGCGAGTATTT
ATTTGGATGTTATCAGCCCTATGGGCCCTCGTATCCAAGTTACGGGCACACCATCTATCTTGCAACAATCAATGACTCAA
CATAAAGTTCGCGCATTACTGCTATCAGGTATTCGCTCTGCGGTACTTTGGCGTCAAGTAGGCGGAAAGCGTCGTCATTT
GATTTTTGGTCGTAAAAAAATGGTCGAACAAGCAAAAATTATATTAGCTCGAATTTAA

Upstream 100 bases:

>100_bases
CACAAATTGCGGTGACTCCAGGTCAATCTGCTGTTTTCTACTCAGGTGAAATTTGCCTAGGTGGCGGTATCATCGAAGAA
CGTATTTAAGGAGTCCTAGC

Downstream 100 bases:

>100_bases
AAAATTAAAGCCTACTTGACTATCAGGTAGGCTTTATCCTTTAACCTTTATAGATATCTAGGAGATTCACATGGAATTGT
CAGCATTAACTGCTGTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MANTLFDRTIAFAGICQAASLVQKMAKDGHCDQAAFDTAIQSILETNPNNTVGVYGKEANLRVGLECLVRDFDNTPTGSE
LTRYLISLMALERKLAGHRDGMSKLGERISTIERQLDHFDIHNEQMLSNIASIYLDVISPMGPRIQVTGTPSILQQSMTQ
HKVRALLLSGIRSAVLWRQVGGKRRHLIFGRKKMVEQAKIILARI

Sequences:

>Translated_205_residues
MANTLFDRTIAFAGICQAASLVQKMAKDGHCDQAAFDTAIQSILETNPNNTVGVYGKEANLRVGLECLVRDFDNTPTGSE
LTRYLISLMALERKLAGHRDGMSKLGERISTIERQLDHFDIHNEQMLSNIASIYLDVISPMGPRIQVTGTPSILQQSMTQ
HKVRALLLSGIRSAVLWRQVGGKRRHLIFGRKKMVEQAKIILARI
>Mature_204_residues
ANTLFDRTIAFAGICQAASLVQKMAKDGHCDQAAFDTAIQSILETNPNNTVGVYGKEANLRVGLECLVRDFDNTPTGSEL
TRYLISLMALERKLAGHRDGMSKLGERISTIERQLDHFDIHNEQMLSNIASIYLDVISPMGPRIQVTGTPSILQQSMTQH
KVRALLLSGIRSAVLWRQVGGKRRHLIFGRKKMVEQAKIILARI

Specific function: Unknown

COG id: COG2915

COG function: function code R; Uncharacterized protein involved in purine metabolism

Gene ontology:

Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hflD family

Homologues:

Organism=Escherichia coli, GI1787377, Length=209, Percent_Identity=52.1531100478469, Blast_Score=226, Evalue=7e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HFLD_ALISL (B6EIL1)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002263562.1
- ProteinModelPortal:   B6EIL1
- GeneID:   6989035
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I2196
- HOGENOM:   HBG739519
- OMA:   LLHNYFR
- ProtClustDB:   PRK00218
- GO:   GO:0005737
- HAMAP:   MF_00695
- InterPro:   IPR007451
- ProDom:   PD037115

Pfam domain/function: PF04356 DUF489; SSF101322 DUF489

EC number: NA

Molecular weight: Translated: 22815; Mature: 22684

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANTLFDRTIAFAGICQAASLVQKMAKDGHCDQAAFDTAIQSILETNPNNTVGVYGKEAN
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC
LRVGLECLVRDFDNTPTGSELTRYLISLMALERKLAGHRDGMSKLGERISTIERQLDHFD
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
IHNEQMLSNIASIYLDVISPMGPRIQVTGTPSILQQSMTQHKVRALLLSGIRSAVLWRQV
CCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGKRRHLIFGRKKMVEQAKIILARI
CCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ANTLFDRTIAFAGICQAASLVQKMAKDGHCDQAAFDTAIQSILETNPNNTVGVYGKEAN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC
LRVGLECLVRDFDNTPTGSELTRYLISLMALERKLAGHRDGMSKLGERISTIERQLDHFD
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
IHNEQMLSNIASIYLDVISPMGPRIQVTGTPSILQQSMTQHKVRALLLSGIRSAVLWRQV
CCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGKRRHLIFGRKKMVEQAKIILARI
CCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA