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The map label for this gene is yfbU [C]

Identifier: 209695621

GI number: 209695621

Start: 2344658

End: 2345158

Strand: Reverse

Name: yfbU [C]

Synonym: VSAL_I2183

Alternate gene names: 209695621

Gene position: 2345158-2344658 (Counterclockwise)

Preceding gene: 209695622

Following gene: 209695619

Centisome position: 70.53

GC content: 38.92

Gene sequence:

>501_bases
ATGGATATGACTAATGCTCAACGCTTGATCCTTTCAAACCAGTATTATCTGATGTCACAAATGGATCCAGAAAACGCGGA
AAAATACCAACGCCAACAACTGATTGTTGAACGTGGTTATGAACTGCAAATTCGTGAATTAGACAAAGATTTTGGCAGTA
TCTCTGAAACAGAATGTCGTGAAATTATCGACTTCATGGAGATGTACCATGCAATGCAAGAATCTTACAATATGCTGATC
CCTGAATGCCAAGCAAAAGTAGATGCACGTCGTTTACAGTTTTTAGGTTTTGATATTGCGACTGAAGCACAGCAAGTAAA
CTATGTGCGTTTCCTTACAAACTCTGAAGGTCTATACCCTCAGTTTGATAAAGCGGATCATCATTTTAATAGCCAAATGC
CTATGATGGACAAGTACCGTCGTATGTTAACAACATGGCGTAACTGCCCACGTCAATACCATTTATGCTCTACTGAAATG
GCGCAAATTTTTAACGCATAA

Upstream 100 bases:

>100_bases
CACATTACTTAATGTAGATCATGTTCTATGTGTTACATTTACTGTTAATCTAGCTTCAACTTTTTATATAAATTTAAATA
ATAATTTTGAGGTTATCCTA

Downstream 100 bases:

>100_bases
TCAGAACACAGTAACTCAATTCTAAATCCTCGCTCTTGCGGGGATTTTTTATATCCGATCTTCACTGAATATTATGCCCT
TAAATAAAAAATCCTCGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MDMTNAQRLILSNQYYLMSQMDPENAEKYQRQQLIVERGYELQIRELDKDFGSISETECREIIDFMEMYHAMQESYNMLI
PECQAKVDARRLQFLGFDIATEAQQVNYVRFLTNSEGLYPQFDKADHHFNSQMPMMDKYRRMLTTWRNCPRQYHLCSTEM
AQIFNA

Sequences:

>Translated_166_residues
MDMTNAQRLILSNQYYLMSQMDPENAEKYQRQQLIVERGYELQIRELDKDFGSISETECREIIDFMEMYHAMQESYNMLI
PECQAKVDARRLQFLGFDIATEAQQVNYVRFLTNSEGLYPQFDKADHHFNSQMPMMDKYRRMLTTWRNCPRQYHLCSTEM
AQIFNA
>Mature_166_residues
MDMTNAQRLILSNQYYLMSQMDPENAEKYQRQQLIVERGYELQIRELDKDFGSISETECREIIDFMEMYHAMQESYNMLI
PECQAKVDARRLQFLGFDIATEAQQVNYVRFLTNSEGLYPQFDKADHHFNSQMPMMDKYRRMLTTWRNCPRQYHLCSTEM
AQIFNA

Specific function: Unknown

COG id: COG3013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0304 family [H]

Homologues:

Organism=Escherichia coli, GI87082081, Length=166, Percent_Identity=58.433734939759, Blast_Score=209, Evalue=6e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005587
- InterPro:   IPR023146
- InterPro:   IPR023145
- ProDom:   PD035118 [H]

Pfam domain/function: PF03887 YfbU [H]

EC number: NA

Molecular weight: Translated: 19946; Mature: 19946

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
7.8 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMTNAQRLILSNQYYLMSQMDPENAEKYQRQQLIVERGYELQIRELDKDFGSISETECR
CCCCCHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
EIIDFMEMYHAMQESYNMLIPECQAKVDARRLQFLGFDIATEAQQVNYVRFLTNSEGLYP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCCCCC
QFDKADHHFNSQMPMMDKYRRMLTTWRNCPRQYHLCSTEMAQIFNA
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDMTNAQRLILSNQYYLMSQMDPENAEKYQRQQLIVERGYELQIRELDKDFGSISETECR
CCCCCHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
EIIDFMEMYHAMQESYNMLIPECQAKVDARRLQFLGFDIATEAQQVNYVRFLTNSEGLYP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCCCCC
QFDKADHHFNSQMPMMDKYRRMLTTWRNCPRQYHLCSTEMAQIFNA
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA