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The map label for this gene is ibrB [H]

Identifier: 209695390

GI number: 209695390

Start: 2060173

End: 2060799

Strand: Reverse

Name: ibrB [H]

Synonym: VSAL_I1925

Alternate gene names: 209695390

Gene position: 2060799-2060173 (Counterclockwise)

Preceding gene: 209695394

Following gene: 209695389

Centisome position: 61.98

GC content: 28.87

Gene sequence:

>627_bases
ATGAATAAAATTGAAAAAGTATTATCTATTTTAAATGAACTTGATGAAATAGATTTTTGCGATTTTGATACAAAAAGTCG
CGTTGACATTTTCAATATACTATCTGACTTGTCATATAAAATTGTTGATATTAAACATCCAGTTTTAAATGTGAAGTTAA
TTAGTTCCAGTTTAATTAGAGATAATGACTACAACCCTAATATTATGGCATCTCCTGAGTATAAATTATTAAAGCATTCA
ATTAAAAAAGATGGCTTAACTATGCCAATAATCGTATCTGAAAGTGATGGTTATATACATAAAATAATTGATGGTTCTCA
TCGAGTTAAAATTATAAAAAATAATCTCGATATTAAAAACTCATTTCATAGCTATATACCTACAGTCAGCTTAATTCATT
CTTATAGCGAACAAATAACATCCTCTGTGAGGCATAACGTAGCAAGAGGCTCTCACCAAGTTGAGTTAACTTCTAAATTA
ATAATGAAACTAAAGCAATCGTCATGGAACAATAAAAAAATATGCGAAGAATTAGGAATGGACCCCGATGAGGTCTTAAG
AATGCAGCAAATTACAGGTTTAGCAGATGCGTATAAAGATGAAGATTTTTCTTTTGCTTGGAAATAA

Upstream 100 bases:

>100_bases
ATGATTATTGGTGCTATGGTTTATCATTTGGACAAAATAAAAAGTTAACTAATTACTATACAGAAATATATGAAGACTAT
AAAAATAACAGGATCGGTGT

Downstream 100 bases:

>100_bases
AATAATGAAAATAATATTTATATCTACTATTTCTATAGCTATTTTATCTACATATACAATAGCAGCAACTACACGATCAG
ATGGAACAATATCAATCGAG

Product: immunoglobulin-binding regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MNKIEKVLSILNELDEIDFCDFDTKSRVDIFNILSDLSYKIVDIKHPVLNVKLISSSLIRDNDYNPNIMASPEYKLLKHS
IKKDGLTMPIIVSESDGYIHKIIDGSHRVKIIKNNLDIKNSFHSYIPTVSLIHSYSEQITSSVRHNVARGSHQVELTSKL
IMKLKQSSWNNKKICEELGMDPDEVLRMQQITGLADAYKDEDFSFAWK

Sequences:

>Translated_208_residues
MNKIEKVLSILNELDEIDFCDFDTKSRVDIFNILSDLSYKIVDIKHPVLNVKLISSSLIRDNDYNPNIMASPEYKLLKHS
IKKDGLTMPIIVSESDGYIHKIIDGSHRVKIIKNNLDIKNSFHSYIPTVSLIHSYSEQITSSVRHNVARGSHQVELTSKL
IMKLKQSSWNNKKICEELGMDPDEVLRMQQITGLADAYKDEDFSFAWK
>Mature_208_residues
MNKIEKVLSILNELDEIDFCDFDTKSRVDIFNILSDLSYKIVDIKHPVLNVKLISSSLIRDNDYNPNIMASPEYKLLKHS
IKKDGLTMPIIVSESDGYIHKIIDGSHRVKIIKNNLDIKNSFHSYIPTVSLIHSYSEQITSSVRHNVARGSHQVELTSKL
IMKLKQSSWNNKKICEELGMDPDEVLRMQQITGLADAYKDEDFSFAWK

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786817, Length=163, Percent_Identity=42.3312883435583, Blast_Score=145, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 23897; Mature: 23897

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIEKVLSILNELDEIDFCDFDTKSRVDIFNILSDLSYKIVDIKHPVLNVKLISSSLIR
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCEEEEEEHHHHHHC
DNDYNPNIMASPEYKLLKHSIKKDGLTMPIIVSESDGYIHKIIDGSHRVKIIKNNLDIKN
CCCCCCCEEECCCHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCHHH
SFHSYIPTVSLIHSYSEQITSSVRHNVARGSHQVELTSKLIMKLKQSSWNNKKICEELGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCC
DPDEVLRMQQITGLADAYKDEDFSFAWK
CHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNKIEKVLSILNELDEIDFCDFDTKSRVDIFNILSDLSYKIVDIKHPVLNVKLISSSLIR
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCEEEEEEHHHHHHC
DNDYNPNIMASPEYKLLKHSIKKDGLTMPIIVSESDGYIHKIIDGSHRVKIIKNNLDIKN
CCCCCCCEEECCCHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCHHH
SFHSYIPTVSLIHSYSEQITSSVRHNVARGSHQVELTSKLIMKLKQSSWNNKKICEELGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCC
DPDEVLRMQQITGLADAYKDEDFSFAWK
CHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]