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The map label for this gene is appY [C]

Identifier: 209695370

GI number: 209695370

Start: 2036033

End: 2037040

Strand: Reverse

Name: appY [C]

Synonym: VSAL_I1903

Alternate gene names: 209695370

Gene position: 2037040-2036033 (Counterclockwise)

Preceding gene: 209695375

Following gene: 209695369

Centisome position: 61.26

GC content: 35.81

Gene sequence:

>1008_bases
ATGATAAAAAAAGCCTCAAAACCACTACCAATGATCCGGACTGGATACACAAAAATCCTTTTAGACGTTTTTTCAAAGCA
CGGGATCAATATTCAGGAATTATTAAATGACTCCGGTTTACCACCCGATCTTTTTGAAACAGATAAAGACTATTTACCCG
TAGAACCGGTGAAACGTCTCGTATATTTACTGTCTTCACAAGTAGGCGTAAATAGTTTTAGCGAGTTGTTACGCATCGCA
TTCCGTCAACGAATAATACCCCAGATACTTAAACAATTTGATACCACCGCAACCGTTAAAGAAGCTCTTGAAAAAGTAAA
TGCCATATTCAATCATGACTCTCCCGGCAGTGAAATTACGTTTGAAAATCAATATGGTAAATATTGGCTTTGCCGCTCAG
CCCCTTACGAAAATACACTCTATTTTATTTGGGGTGAAGTATTTTCCGTCTTATATATCATCGAACTCATTCAGGCATTA
ACAAAATCAGATTGGTTTCCTGAACAAGTAAAGGTCCAACATATTGATGATGATGTGATTCGTTCGGCGCTAAATAAAAA
AACACAATTTTTTATAGCTCAAAGTAAAAGCGCGTTATTAATGGATGAAAAAACACTCAATTCTACCGTTAAATTTATTC
CATCAGACACTAAAAATAAAGAACCATTAATTGAATGGCATTCTAGTTTCAGTGATAGCGTCTTTACCTCGTTGCTTCCT
TATGTTCGTGAACATTCCCTCAGCATCACTCAAGCCGCTAAGCTATTACAAATGACAACAAGAACCTTCCAACGTCGACT
AAAAGAAGAGAGAACGTCATTTAGACAGTTAAAAGAAAGCCTTACTCTATCTATATCATGTGAATTAATGGAAGAAGGTT
ATTCATTAACTTATATATCAAATCAACTTGGTTATAACAATATTTCCCACTTTTCACGGGCATTCAAACGCATTAGCGGG
CTAACACCAAAAGTATATAGAAAGTCGATACTTGGACTTACAGAATAA

Upstream 100 bases:

>100_bases
GATAAATTAATATATCAAACTAAGTAGGATGAAAACTTACCATTTTGCGCCAATAATTAATTATATAAAGAATGAATTAG
TAAAAAGAAGGGAGATCTTA

Downstream 100 bases:

>100_bases
ATTTACCATTATACGCCAACCTATTTTCTTTCACTTTTAATACGAATGATGATTAGGCAATATAATAAACAGAACAACAT
CGAACAATTCAATTAACGGT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator; HTH-Type Transcriptional Regulator AraC Family

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MIKKASKPLPMIRTGYTKILLDVFSKHGINIQELLNDSGLPPDLFETDKDYLPVEPVKRLVYLLSSQVGVNSFSELLRIA
FRQRIIPQILKQFDTTATVKEALEKVNAIFNHDSPGSEITFENQYGKYWLCRSAPYENTLYFIWGEVFSVLYIIELIQAL
TKSDWFPEQVKVQHIDDDVIRSALNKKTQFFIAQSKSALLMDEKTLNSTVKFIPSDTKNKEPLIEWHSSFSDSVFTSLLP
YVREHSLSITQAAKLLQMTTRTFQRRLKEERTSFRQLKESLTLSISCELMEEGYSLTYISNQLGYNNISHFSRAFKRISG
LTPKVYRKSILGLTE

Sequences:

>Translated_335_residues
MIKKASKPLPMIRTGYTKILLDVFSKHGINIQELLNDSGLPPDLFETDKDYLPVEPVKRLVYLLSSQVGVNSFSELLRIA
FRQRIIPQILKQFDTTATVKEALEKVNAIFNHDSPGSEITFENQYGKYWLCRSAPYENTLYFIWGEVFSVLYIIELIQAL
TKSDWFPEQVKVQHIDDDVIRSALNKKTQFFIAQSKSALLMDEKTLNSTVKFIPSDTKNKEPLIEWHSSFSDSVFTSLLP
YVREHSLSITQAAKLLQMTTRTFQRRLKEERTSFRQLKESLTLSISCELMEEGYSLTYISNQLGYNNISHFSRAFKRISG
LTPKVYRKSILGLTE
>Mature_335_residues
MIKKASKPLPMIRTGYTKILLDVFSKHGINIQELLNDSGLPPDLFETDKDYLPVEPVKRLVYLLSSQVGVNSFSELLRIA
FRQRIIPQILKQFDTTATVKEALEKVNAIFNHDSPGSEITFENQYGKYWLCRSAPYENTLYFIWGEVFSVLYIIELIQAL
TKSDWFPEQVKVQHIDDDVIRSALNKKTQFFIAQSKSALLMDEKTLNSTVKFIPSDTKNKEPLIEWHSSFSDSVFTSLLP
YVREHSLSITQAAKLLQMTTRTFQRRLKEERTSFRQLKESLTLSISCELMEEGYSLTYISNQLGYNNISHFSRAFKRISG
LTPKVYRKSILGLTE

Specific function: Induces The Synthesis Of Acid Phosphatase (Appa) And Several Other Polypeptides (Such As Appbc) During The Deceleration Phase Of Growth. It Also Acts As A Transcriptional Repressor For One Group Of Proteins That Are Synthesized Preferentially In Exponenti

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38663; Mature: 38663

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKASKPLPMIRTGYTKILLDVFSKHGINIQELLNDSGLPPDLFETDKDYLPVEPVKRL
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHCCCCCCCHHHHHHH
VYLLSSQVGVNSFSELLRIAFRQRIIPQILKQFDTTATVKEALEKVNAIFNHDSPGSEIT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEE
FENQYGKYWLCRSAPYENTLYFIWGEVFSVLYIIELIQALTKSDWFPEQVKVQHIDDDVI
ECCCCCCEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHH
RSALNKKTQFFIAQSKSALLMDEKTLNSTVKFIPSDTKNKEPLIEWHSSFSDSVFTSLLP
HHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHH
YVREHSLSITQAAKLLQMTTRTFQRRLKEERTSFRQLKESLTLSISCELMEEGYSLTYIS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCEEEEEE
NQLGYNNISHFSRAFKRISGLTPKVYRKSILGLTE
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MIKKASKPLPMIRTGYTKILLDVFSKHGINIQELLNDSGLPPDLFETDKDYLPVEPVKRL
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHCCCCCCCHHHHHHH
VYLLSSQVGVNSFSELLRIAFRQRIIPQILKQFDTTATVKEALEKVNAIFNHDSPGSEIT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEE
FENQYGKYWLCRSAPYENTLYFIWGEVFSVLYIIELIQALTKSDWFPEQVKVQHIDDDVI
ECCCCCCEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHH
RSALNKKTQFFIAQSKSALLMDEKTLNSTVKFIPSDTKNKEPLIEWHSSFSDSVFTSLLP
HHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHH
YVREHSLSITQAAKLLQMTTRTFQRRLKEERTSFRQLKESLTLSISCELMEEGYSLTYIS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCEEEEEE
NQLGYNNISHFSRAFKRISGLTPKVYRKSILGLTE
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA