Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695369

Identifier: 209695369

GI number: 209695369

Start: 2035463

End: 2035921

Strand: Reverse

Name: 209695369

Synonym: VSAL_I1902

Alternate gene names: NA

Gene position: 2035921-2035463 (Counterclockwise)

Preceding gene: 209695370

Following gene: 209695352

Centisome position: 61.23

GC content: 33.12

Gene sequence:

>459_bases
ATGAGCTCAGTAGAAAAAGAATATGGTTTTAGTACTCCACAACGTTTATTTGTAGGTTACACACTTGCAGTATTGGTCGA
TCTAACCGTACTAAATTTTTTTGATGAATATTGGGATTTTGTTAATATCGAATCATTCACCATTTCTTTTGCAGCTGCAA
TACTCCTGCAGTTATTACTAAAACTTTCCATAAATGCAGAGCATAGAATTGCTGATTATTTTAAAAGCAAACCAGGAACC
GCACCAAAAATATACCGTGGTTTAAGCAGTTATGTCATATTAGTCGGTAGTAAATTCGTTATGTTAGAAGCCATTAATAT
TCTATTTGGTGATAAGGTATCGTTTGGCGGTCCATTAAATGGTGTCGTCGCTTTCTTTGCCGTAGTATTTACGATACTCA
TAGCAGAAATTACCGTATCTAAAATTTACTTTGCTTTAAGTGACAAAAAAAATAATTAA

Upstream 100 bases:

>100_bases
TACGCCAACCTATTTTCTTTCACTTTTAATACGAATGATGATTAGGCAATATAATAAACAGAACAACATCGAACAATTCA
ATTAACGGTTAGGAATTACT

Downstream 100 bases:

>100_bases
TCACGCTTACAAAAGAACCGATCAAAAAATGGCGACCAATGTGTGGTCGCCATGTTTATTTCAACTACTTATTTACTATT
TACGGGCATTTAGCTGCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSSVEKEYGFSTPQRLFVGYTLAVLVDLTVLNFFDEYWDFVNIESFTISFAAAILLQLLLKLSINAEHRIADYFKSKPGT
APKIYRGLSSYVILVGSKFVMLEAINILFGDKVSFGGPLNGVVAFFAVVFTILIAEITVSKIYFALSDKKNN

Sequences:

>Translated_152_residues
MSSVEKEYGFSTPQRLFVGYTLAVLVDLTVLNFFDEYWDFVNIESFTISFAAAILLQLLLKLSINAEHRIADYFKSKPGT
APKIYRGLSSYVILVGSKFVMLEAINILFGDKVSFGGPLNGVVAFFAVVFTILIAEITVSKIYFALSDKKNN
>Mature_151_residues
SSVEKEYGFSTPQRLFVGYTLAVLVDLTVLNFFDEYWDFVNIESFTISFAAAILLQLLLKLSINAEHRIADYFKSKPGTA
PKIYRGLSSYVILVGSKFVMLEAINILFGDKVSFGGPLNGVVAFFAVVFTILIAEITVSKIYFALSDKKNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16943; Mature: 16812

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVEKEYGFSTPQRLFVGYTLAVLVDLTVLNFFDEYWDFVNIESFTISFAAAILLQLLL
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KLSINAEHRIADYFKSKPGTAPKIYRGLSSYVILVGSKFVMLEAINILFGDKVSFGGPLN
HHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHH
GVVAFFAVVFTILIAEITVSKIYFALSDKKNN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SSVEKEYGFSTPQRLFVGYTLAVLVDLTVLNFFDEYWDFVNIESFTISFAAAILLQLLL
CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KLSINAEHRIADYFKSKPGTAPKIYRGLSSYVILVGSKFVMLEAINILFGDKVSFGGPLN
HHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHH
GVVAFFAVVFTILIAEITVSKIYFALSDKKNN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA