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The map label for this gene is 209695293

Identifier: 209695293

GI number: 209695293

Start: 1949064

End: 1949618

Strand: Reverse

Name: 209695293

Synonym: VSAL_I1823

Alternate gene names: NA

Gene position: 1949618-1949064 (Counterclockwise)

Preceding gene: 209695294

Following gene: 209695290

Centisome position: 58.63

GC content: 38.02

Gene sequence:

>555_bases
ATGTTGAGTCACCAAAGGAACACCATGAACTTTAATCGTATCGTCTGTTTTGATTTAGAAATGTGCTGTTGGAATGAGAA
TGGCAAAGGCAGAACAGGAGAAATCATTGAAGTCGGTTTGGCTGAAATTGATCTGCAGACAGGCGAAGTGGTTAGACGCG
CTCAATATTATGTAAAGCCTGACGAAGATGAAATTTCACTTTTTTGTGTTGAACTTACGGGGATCACTCCGCGTAAAATT
GAGAAACAAGGCAGACCTTTAGAAGGCGTTTTGAAATCAATGATTAAAAACTTCGGTGGCACAAATAAAATTTATGCTGC
TTGGGGTCATGATGAACTGATTTTAAAATCTGAGTGTGAAGCGAAAGGCATTGAATTTCCATTTGTTGAATTTATTAATC
TAGCGACTCTTTATCGTATTAAATCGCGTAAGAAAAATGATCGTATGGGTCAACGCAGAGCAATGGAAGAGCTTCATATC
GAATGGGAAGGGCGACAGCATTCAGGTTATGTTGATGCGTATAATTTAGCTCAATTAGCCTTAAAAATACTATAA

Upstream 100 bases:

>100_bases
GAGGCAGAAACCAAGTAACTATTCGTGGCTGATTTTTCATCAAACGAATAGCAGAGTCTCGCGTAAGCGCTTTTGATTTA
GTAGAATACCCATCTACTAA

Downstream 100 bases:

>100_bases
TAACCAAAAGGTTAAAATATTTAGATAACAAAAAAGGAGCTGGTTAGCTCCTTTTTTCGTTTGATTTTAAAGCGTTATTT
ATTATCACGTTTGTATAGTT

Product: exonuclease

Products: NA

Alternate protein names: Exonuclease; Exonuclease Superfamily Protein; Exonuclease KapD; Exonuclease Superfamily

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MLSHQRNTMNFNRIVCFDLEMCCWNENGKGRTGEIIEVGLAEIDLQTGEVVRRAQYYVKPDEDEISLFCVELTGITPRKI
EKQGRPLEGVLKSMIKNFGGTNKIYAAWGHDELILKSECEAKGIEFPFVEFINLATLYRIKSRKKNDRMGQRRAMEELHI
EWEGRQHSGYVDAYNLAQLALKIL

Sequences:

>Translated_184_residues
MLSHQRNTMNFNRIVCFDLEMCCWNENGKGRTGEIIEVGLAEIDLQTGEVVRRAQYYVKPDEDEISLFCVELTGITPRKI
EKQGRPLEGVLKSMIKNFGGTNKIYAAWGHDELILKSECEAKGIEFPFVEFINLATLYRIKSRKKNDRMGQRRAMEELHI
EWEGRQHSGYVDAYNLAQLALKIL
>Mature_184_residues
MLSHQRNTMNFNRIVCFDLEMCCWNENGKGRTGEIIEVGLAEIDLQTGEVVRRAQYYVKPDEDEISLFCVELTGITPRKI
EKQGRPLEGVLKSMIKNFGGTNKIYAAWGHDELILKSECEAKGIEFPFVEFINLATLYRIKSRKKNDRMGQRRAMEELHI
EWEGRQHSGYVDAYNLAQLALKIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI218505680, Length=209, Percent_Identity=30.1435406698565, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI218505674, Length=209, Percent_Identity=30.1435406698565, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24657520, Length=199, Percent_Identity=27.6381909547739, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24657528, Length=199, Percent_Identity=27.6381909547739, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI28573607, Length=199, Percent_Identity=27.6381909547739, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI221330522, Length=199, Percent_Identity=27.6381909547739, Blast_Score=67, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21259; Mature: 21259

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSHQRNTMNFNRIVCFDLEMCCWNENGKGRTGEIIEVGLAEIDLQTGEVVRRAQYYVKP
CCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCEEEECHHEEECCHHHHHHHHHHEECC
DEDEISLFCVELTGITPRKIEKQGRPLEGVLKSMIKNFGGTNKIYAAWGHDELILKSECE
CCCCEEEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCC
AKGIEFPFVEFINLATLYRIKSRKKNDRMGQRRAMEELHIEWEGRQHSGYVDAYNLAQLA
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHH
LKIL
HHCC
>Mature Secondary Structure
MLSHQRNTMNFNRIVCFDLEMCCWNENGKGRTGEIIEVGLAEIDLQTGEVVRRAQYYVKP
CCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCEEEECHHEEECCHHHHHHHHHHEECC
DEDEISLFCVELTGITPRKIEKQGRPLEGVLKSMIKNFGGTNKIYAAWGHDELILKSECE
CCCCEEEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCC
AKGIEFPFVEFINLATLYRIKSRKKNDRMGQRRAMEELHIEWEGRQHSGYVDAYNLAQLA
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHH
LKIL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA