Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695266

Identifier: 209695266

GI number: 209695266

Start: 1907270

End: 1907986

Strand: Reverse

Name: 209695266

Synonym: VSAL_I1789

Alternate gene names: NA

Gene position: 1907986-1907270 (Counterclockwise)

Preceding gene: 209695267

Following gene: 209695265

Centisome position: 57.38

GC content: 41.42

Gene sequence:

>717_bases
ATGGCAAAAGAGAAAGAGAAAGAAATGATTCAACGAGAAAGTTATTGCGTTTACATTGAACGTACTTCTCGCAGAAAAAC
CGCGTCCATTAAAGTGGAAGAGGGAAAGGTCATTGTCGTTGTGCCAAGAAAGTTAGATCTTGAACGCATAGAAAAGTTAA
TTACAGATAAGCACCAGTGGATTATCGAAAAGATCGCGTTAAATCAGCATGCGACACCGATGAATGCGAGAGAGTATGTG
TCAGGTGAGGCTTTCCCTTACCTTGGGCGTAATTATCGCTTAAAAGTGGTGGCAGGTGATCTGACTCAAACCAAATTGAT
TGCAGGGCGTATTCTCGTCACAGTGCCTGACCCTAAGCATCAGCCGCAGTATATTAATCGCGCCTTGGTGAATTGGTATA
AGCGGAATGCAGAAAAGAAAATTCGTGAAAAAGTTCACCGCTATGCGCCGATGGTGGGGGTTGAAACTGCGGTTATTCGT
ATTAAAGAATTTAAAAGCCGTTGGGGAAGTTGTACGCCTTACGGAGATTTAGAATTTAATTGGTTAATCATGCAAGCGCC
AAATCGCGTGGTGGATTATGTGGTGATTCATGAACTGTGTCATCTCATTCATCACGATCATTCACCTCAGTTTTGGAAAG
AAGTTGAAAGAGTGATGCCTGATTTTCAAGAGCAAAAATTATGGCTAAAAAACAATGGGTATTCATTATCCGTTTAA

Upstream 100 bases:

>100_bases
CGTGCTGTTCTTGATCAACCATTTGGTGATAAAGCTTTGGTAACGGTTCTACAAGATCGCTTTATGGATTTGGCGAAAAC
CAAGTTCGGAAACAAATAGC

Downstream 100 bases:

>100_bases
TTTATTGTCTTTTTTATCAATTAATTAACGTATTCTCTTCTTTTTTGTATCCACCTACCTACAAAGTATGATGAATATCT
CGATTTTACTGTAACGTATG

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolase; Zinc Metallopeptidase; Zinc Metallopeptidases-Like Protein; Metal-Dependent Hydrolase Family Protein; Zinc Metallopeptidase-Like Protein; Hydrolase; Zinc Metallopeptidase Protein; Protease

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MAKEKEKEMIQRESYCVYIERTSRRKTASIKVEEGKVIVVVPRKLDLERIEKLITDKHQWIIEKIALNQHATPMNAREYV
SGEAFPYLGRNYRLKVVAGDLTQTKLIAGRILVTVPDPKHQPQYINRALVNWYKRNAEKKIREKVHRYAPMVGVETAVIR
IKEFKSRWGSCTPYGDLEFNWLIMQAPNRVVDYVVIHELCHLIHHDHSPQFWKEVERVMPDFQEQKLWLKNNGYSLSV

Sequences:

>Translated_238_residues
MAKEKEKEMIQRESYCVYIERTSRRKTASIKVEEGKVIVVVPRKLDLERIEKLITDKHQWIIEKIALNQHATPMNAREYV
SGEAFPYLGRNYRLKVVAGDLTQTKLIAGRILVTVPDPKHQPQYINRALVNWYKRNAEKKIREKVHRYAPMVGVETAVIR
IKEFKSRWGSCTPYGDLEFNWLIMQAPNRVVDYVVIHELCHLIHHDHSPQFWKEVERVMPDFQEQKLWLKNNGYSLSV
>Mature_237_residues
AKEKEKEMIQRESYCVYIERTSRRKTASIKVEEGKVIVVVPRKLDLERIEKLITDKHQWIIEKIALNQHATPMNAREYVS
GEAFPYLGRNYRLKVVAGDLTQTKLIAGRILVTVPDPKHQPQYINRALVNWYKRNAEKKIREKVHRYAPMVGVETAVIRI
KEFKSRWGSCTPYGDLEFNWLIMQAPNRVVDYVVIHELCHLIHHDHSPQFWKEVERVMPDFQEQKLWLKNNGYSLSV

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28123; Mature: 27992

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEKEKEMIQRESYCVYIERTSRRKTASIKVEEGKVIVVVPRKLDLERIEKLITDKHQW
CCCHHHHHHHHHCCEEEEEEECCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHCCHHHH
IIEKIALNQHATPMNAREYVSGEAFPYLGRNYRLKVVAGDLTQTKLIAGRILVTVPDPKH
HHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEECCCHHHHEEECEEEEECCCCCC
QPQYINRALVNWYKRNAEKKIREKVHRYAPMVGVETAVIRIKEFKSRWGSCTPYGDLEFN
CHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE
WLIMQAPNRVVDYVVIHELCHLIHHDHSPQFWKEVERVMPDFQEQKLWLKNNGYSLSV
EEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHCEEEEECCCEEECC
>Mature Secondary Structure 
AKEKEKEMIQRESYCVYIERTSRRKTASIKVEEGKVIVVVPRKLDLERIEKLITDKHQW
CCHHHHHHHHHCCEEEEEEECCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHCCHHHH
IIEKIALNQHATPMNAREYVSGEAFPYLGRNYRLKVVAGDLTQTKLIAGRILVTVPDPKH
HHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEECCCHHHHEEECEEEEECCCCCC
QPQYINRALVNWYKRNAEKKIREKVHRYAPMVGVETAVIRIKEFKSRWGSCTPYGDLEFN
CHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE
WLIMQAPNRVVDYVVIHELCHLIHHDHSPQFWKEVERVMPDFQEQKLWLKNNGYSLSV
EEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHCEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA