| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is cinA [C]
Identifier: 209695251
GI number: 209695251
Start: 1889844
End: 1891076
Strand: Reverse
Name: cinA [C]
Synonym: VSAL_I1773
Alternate gene names: 209695251
Gene position: 1891076-1889844 (Counterclockwise)
Preceding gene: 209695254
Following gene: 209695246
Centisome position: 56.87
GC content: 41.93
Gene sequence:
>1233_bases ATGTTGCAAATTGCAATGATCAGCACAGGAGAGGAAGTCTTACATGGCGACATTGTTGACACCAATGCAGCATGGATGTC TCAGTTATTTTATCAGCATGGGTTTAAGTTATCTAACCGCTCAACGGTTGGGGATAACATAGATTCATTGGTTTCTGAAA TTCAGCATCAAAGTCAAAATGCCTCTATTGTGATTGTTAATGGGGGGTTAGGCCCTACCTCTGATGATATTTCTGGAGAA GCGGCTGCGAAAGTAATGAACTGTCCACTTGTGATGTCACAATATTGGCTAGATCGCATGCAGGCTCGTTATTTAGAGCA GGGTAAAGAGATGCCACGGAGTAACATTAAACAAGCAATGTTACCTGAAGGTGCTCAGTTGATTGAGAACCCTGTTGGTA CTGCGTGTGGTTTCTTCATTGAATTAAATAAAACAATCGTTATCTTTACTCCAGGCGTCCCATCGGAGTTTAAAGTAATG GTTGAGCATCAAATCTTGCCACGTATGAAACAATGGCATCCAATGACTGAAGCGTCTGAATGCAGCCGATTGTTTACGTT TGGTTTATCAGAATCGGGTATTCAGGATAAGCTTCAAAGTGTACGACTTCCGCATGGTTTTGATATTGGATACCGTTCTT CGTTACCCTTTATTGAAGTGAAATTATTTGGTCCGGCAAATCATGATGGACGCTTCCCTACGTTAGAGACGATATATCAC CTTCTAGGGGACAACGTTGTTAGTGTTGATGAATCAATGCTCCCTAATGTTGGTGCATTACTGTCTGAATTTATGCTGAA CTTTACGGTTGCGGAGCAGGCGACGGGTGGGTGGTTAACCAATTGGTTGCAAGAAGATGAACAAATTCGCTCTTGCATGA AGCAGGGTTGGATTTTATCTTCTAAAATTGATCAGCAAATGGCAGGGCAAGATCCACTGGCTGCTGCTTTAGCACTGGCG GCGGCAACACGAGAGAGAACTCAAACGTCAATTGGTTTAGCTTCTGGTCCTATGTTTAATGGCAAAGTTGCTGTTGCATT ATCAACGGCTTATGGCGAATGGGGACAGTTAATCAGCCTAAAGCGTGATTATAATTATAATGATATGCGTTCATTAGTCT CGACACTCATGTTAGATATGCTGCGTCGTTGTTTAGAAAAGAAACCGATGTTTGGTCAATATGAATCGATAAATCGTGAA TCAGAAATTTACGTACCACAGAGTGCATTATAG
Upstream 100 bases:
>100_bases TGTGCTTAAATACGGTAATATTTACTCAACATCATAGTTTTTGAATAGCCTAATGTGATAAATTAGAGGTAATTATAGAA ATATCAAAGAGGAAAAGTGC
Downstream 100 bases:
>100_bases TTTAACGTATTGATGTGCTTGATAACCGAATAATGCGATCCTAGAAGGGTCGTTTTTTTATGCTTTTTTTGCGAGAGTTT GGAACGTAAGATCGTCGATA
Product: molybdopterin binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MLQIAMISTGEEVLHGDIVDTNAAWMSQLFYQHGFKLSNRSTVGDNIDSLVSEIQHQSQNASIVIVNGGLGPTSDDISGE AAAKVMNCPLVMSQYWLDRMQARYLEQGKEMPRSNIKQAMLPEGAQLIENPVGTACGFFIELNKTIVIFTPGVPSEFKVM VEHQILPRMKQWHPMTEASECSRLFTFGLSESGIQDKLQSVRLPHGFDIGYRSSLPFIEVKLFGPANHDGRFPTLETIYH LLGDNVVSVDESMLPNVGALLSEFMLNFTVAEQATGGWLTNWLQEDEQIRSCMKQGWILSSKIDQQMAGQDPLAAALALA AATRERTQTSIGLASGPMFNGKVAVALSTAYGEWGQLISLKRDYNYNDMRSLVSTLMLDMLRRCLEKKPMFGQYESINRE SEIYVPQSAL
Sequences:
>Translated_410_residues MLQIAMISTGEEVLHGDIVDTNAAWMSQLFYQHGFKLSNRSTVGDNIDSLVSEIQHQSQNASIVIVNGGLGPTSDDISGE AAAKVMNCPLVMSQYWLDRMQARYLEQGKEMPRSNIKQAMLPEGAQLIENPVGTACGFFIELNKTIVIFTPGVPSEFKVM VEHQILPRMKQWHPMTEASECSRLFTFGLSESGIQDKLQSVRLPHGFDIGYRSSLPFIEVKLFGPANHDGRFPTLETIYH LLGDNVVSVDESMLPNVGALLSEFMLNFTVAEQATGGWLTNWLQEDEQIRSCMKQGWILSSKIDQQMAGQDPLAAALALA AATRERTQTSIGLASGPMFNGKVAVALSTAYGEWGQLISLKRDYNYNDMRSLVSTLMLDMLRRCLEKKPMFGQYESINRE SEIYVPQSAL >Mature_410_residues MLQIAMISTGEEVLHGDIVDTNAAWMSQLFYQHGFKLSNRSTVGDNIDSLVSEIQHQSQNASIVIVNGGLGPTSDDISGE AAAKVMNCPLVMSQYWLDRMQARYLEQGKEMPRSNIKQAMLPEGAQLIENPVGTACGFFIELNKTIVIFTPGVPSEFKVM VEHQILPRMKQWHPMTEASECSRLFTFGLSESGIQDKLQSVRLPHGFDIGYRSSLPFIEVKLFGPANHDGRFPTLETIYH LLGDNVVSVDESMLPNVGALLSEFMLNFTVAEQATGGWLTNWLQEDEQIRSCMKQGWILSSKIDQQMAGQDPLAAALALA AATRERTQTSIGLASGPMFNGKVAVALSTAYGEWGQLISLKRDYNYNDMRSLVSTLMLDMLRRCLEKKPMFGQYESINRE SEIYVPQSAL
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family [H]
Homologues:
Organism=Escherichia coli, GI1788583, Length=398, Percent_Identity=39.9497487437186, Blast_Score=273, Evalue=2e-74, Organism=Saccharomyces cerevisiae, GI6323832, Length=216, Percent_Identity=26.8518518518519, Blast_Score=85, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008135 - InterPro: IPR020817 - InterPro: IPR001453 [H]
Pfam domain/function: PF00994 MoCF_biosynth [H]
EC number: NA
Molecular weight: Translated: 45574; Mature: 45574
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQIAMISTGEEVLHGDIVDTNAAWMSQLFYQHGFKLSNRSTVGDNIDSLVSEIQHQSQN CEEEEEECCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCC ASIVIVNGGLGPTSDDISGEAAAKVMNCPLVMSQYWLDRMQARYLEQGKEMPRSNIKQAM CEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LPEGAQLIENPVGTACGFFIELNKTIVIFTPGVPSEFKVMVEHQILPRMKQWHPMTEASE CCCCHHHHHCCCCHHHEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH CSRLFTFGLSESGIQDKLQSVRLPHGFDIGYRSSLPFIEVKLFGPANHDGRFPTLETIYH HHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHH LLGDNVVSVDESMLPNVGALLSEFMLNFTVAEQATGGWLTNWLQEDEQIRSCMKQGWILS HHCCCEEECCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEH SKIDQQMAGQDPLAAALALAAATRERTQTSIGLASGPMFNGKVAVALSTAYGEWGQLISL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHEEE KRDYNYNDMRSLVSTLMLDMLRRCLEKKPMFGQYESINRESEIYVPQSAL ECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEECCCCCC >Mature Secondary Structure MLQIAMISTGEEVLHGDIVDTNAAWMSQLFYQHGFKLSNRSTVGDNIDSLVSEIQHQSQN CEEEEEECCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCC ASIVIVNGGLGPTSDDISGEAAAKVMNCPLVMSQYWLDRMQARYLEQGKEMPRSNIKQAM CEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LPEGAQLIENPVGTACGFFIELNKTIVIFTPGVPSEFKVMVEHQILPRMKQWHPMTEASE CCCCHHHHHCCCCHHHEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH CSRLFTFGLSESGIQDKLQSVRLPHGFDIGYRSSLPFIEVKLFGPANHDGRFPTLETIYH HHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHH LLGDNVVSVDESMLPNVGALLSEFMLNFTVAEQATGGWLTNWLQEDEQIRSCMKQGWILS HHCCCEEECCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEH SKIDQQMAGQDPLAAALALAAATRERTQTSIGLASGPMFNGKVAVALSTAYGEWGQLISL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHEEE KRDYNYNDMRSLVSTLMLDMLRRCLEKKPMFGQYESINRESEIYVPQSAL ECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA