| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is ppsA [H]
Identifier: 209695211
GI number: 209695211
Start: 1837282
End: 1838166
Strand: Reverse
Name: ppsA [H]
Synonym: VSAL_I1726
Alternate gene names: 209695211
Gene position: 1838166-1837282 (Counterclockwise)
Preceding gene: 209695214
Following gene: 209695209
Centisome position: 55.28
GC content: 38.64
Gene sequence:
>885_bases ATGACTAATACTATTTTACCAACGTTAACTCGCGTAGCTAGTTTACCGTCTTATCAATCAAGCACCGATTCAAATGCATC TTTGTATGTGTCTATCGCAGGGCTTATTCAAGAGCATTTGTTTTATCATCCAAAGGCCGTGATTAATACGCCAAAGATGA GTGACATTGATGCGCAAAGTCTTGCGGCAATAATAGAAAGTGCATCTGATGGTAAAACCCATTTTGTTGATACGTTATCT ACTGTGATTCTTGACAATATTACTGACGAAACAAAAGAAGTGAAAATTGCTTTTTCTGATGCAGACAGCAGTGCGTTTTC AGGCTTACTTGTTGGTCAATTAGAACCAAAAGAAATGAACCCAATGATGGGCGTTCGTGGTGTAACACGTTATGCATCGG ATGAAAGTTCTGAGCAATTTGCATTAGAGTGTGCTGTAATTAAAAAAGTCATTGCTTCAACTTCGGCAGTGGTTCAAATT GTCGTTCCATTTGTTCGCAACTTAAGTGACGCAGCTACGATTATTGACCGTTTAGCGATTTATGGTTTGCCTCGTGGACT GAATGGCCTAAAAGTACACTTTGTGTGTGATGTACCTGCTGCATCATTAATGGCTGAGAAATTATTACAATATTTTGATG GTTTGGTTGTTAATGTTGATACGTTAACGCAGTTTACACTGGGTGTAGATAAACAAAATGAAGCGCTAGAGCATCATTTT GAACCACAGAATGAAGCCGTATTACATTTGATCAGTTATGCAATTCAAGCGGCGAATAAAGCCAATAAACCCGTAATGAT AACCATTGATGAATTGGCTCAAAATACGCGAGTTCAAGAGCTATTGGATCAATTGAATGCAACCGATGTGGTTGTTACTG CGTAA
Upstream 100 bases:
>100_bases GGCTTGAGTTGTTGTTAATGTATCGGTATGTTCAACATAAATAACATGTAATCATTCATAAATATAATTAAACTGAATCA ATGAGTTCATTGGAGCAAGC
Downstream 100 bases:
>100_bases TTAATACGCTTAACCATTGTATTTGTCTCGTTTTAGAACACGTTGACGATTGATAGTAAAAAGCCTCCAACTCAAAAAAC AATGAGTGGAGGCTTTTTAA
Product: PEP-utilising enzyme
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MTNTILPTLTRVASLPSYQSSTDSNASLYVSIAGLIQEHLFYHPKAVINTPKMSDIDAQSLAAIIESASDGKTHFVDTLS TVILDNITDETKEVKIAFSDADSSAFSGLLVGQLEPKEMNPMMGVRGVTRYASDESSEQFALECAVIKKVIASTSAVVQI VVPFVRNLSDAATIIDRLAIYGLPRGLNGLKVHFVCDVPAASLMAEKLLQYFDGLVVNVDTLTQFTLGVDKQNEALEHHF EPQNEAVLHLISYAIQAANKANKPVMITIDELAQNTRVQELLDQLNATDVVVTA
Sequences:
>Translated_294_residues MTNTILPTLTRVASLPSYQSSTDSNASLYVSIAGLIQEHLFYHPKAVINTPKMSDIDAQSLAAIIESASDGKTHFVDTLS TVILDNITDETKEVKIAFSDADSSAFSGLLVGQLEPKEMNPMMGVRGVTRYASDESSEQFALECAVIKKVIASTSAVVQI VVPFVRNLSDAATIIDRLAIYGLPRGLNGLKVHFVCDVPAASLMAEKLLQYFDGLVVNVDTLTQFTLGVDKQNEALEHHF EPQNEAVLHLISYAIQAANKANKPVMITIDELAQNTRVQELLDQLNATDVVVTA >Mature_293_residues TNTILPTLTRVASLPSYQSSTDSNASLYVSIAGLIQEHLFYHPKAVINTPKMSDIDAQSLAAIIESASDGKTHFVDTLST VILDNITDETKEVKIAFSDADSSAFSGLLVGQLEPKEMNPMMGVRGVTRYASDESSEQFALECAVIKKVIASTSAVVQIV VPFVRNLSDAATIIDRLAIYGLPRGLNGLKVHFVCDVPAASLMAEKLLQYFDGLVVNVDTLTQFTLGVDKQNEALEHHFE PQNEAVLHLISYAIQAANKANKPVMITIDELAQNTRVQELLDQLNATDVVVTA
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=178, Percent_Identity=41.0112359550562, Blast_Score=147, Evalue=8e-37, Organism=Escherichia coli, GI1788756, Length=173, Percent_Identity=27.1676300578035, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 31879; Mature: 31747
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTILPTLTRVASLPSYQSSTDSNASLYVSIAGLIQEHLFYHPKAVINTPKMSDIDAQS CCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCHHHCCCCCCCCCCHHH LAAIIESASDGKTHFVDTLSTVILDNITDETKEVKIAFSDADSSAFSGLLVGQLEPKEMN HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHCCEEEECCCCHHCC PMMGVRGVTRYASDESSEQFALECAVIKKVIASTSAVVQIVVPFVRNLSDAATIIDRLAI CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH YGLPRGLNGLKVHFVCDVPAASLMAEKLLQYFDGLVVNVDTLTQFTLGVDKQNEALEHHF HCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCCCHHHHHHCC EPQNEAVLHLISYAIQAANKANKPVMITIDELAQNTRVQELLDQLNATDVVVTA CCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCCHHHHHHHHCCCCCEEEEC >Mature Secondary Structure TNTILPTLTRVASLPSYQSSTDSNASLYVSIAGLIQEHLFYHPKAVINTPKMSDIDAQS CCCHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCHHHCCCCCCCCCCHHH LAAIIESASDGKTHFVDTLSTVILDNITDETKEVKIAFSDADSSAFSGLLVGQLEPKEMN HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHCCEEEECCCCHHCC PMMGVRGVTRYASDESSEQFALECAVIKKVIASTSAVVQIVVPFVRNLSDAATIIDRLAI CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH YGLPRGLNGLKVHFVCDVPAASLMAEKLLQYFDGLVVNVDTLTQFTLGVDKQNEALEHHF HCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCCCHHHHHHCC EPQNEAVLHLISYAIQAANKANKPVMITIDELAQNTRVQELLDQLNATDVVVTA CCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCCCHHHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1310524; 9097039; 9278503 [H]