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The map label for this gene is glpQ [H]

Identifier: 209695201

GI number: 209695201

Start: 1821978

End: 1823036

Strand: Reverse

Name: glpQ [H]

Synonym: VSAL_I1712

Alternate gene names: 209695201

Gene position: 1823036-1821978 (Counterclockwise)

Preceding gene: 209695202

Following gene: 209695197

Centisome position: 54.83

GC content: 40.6

Gene sequence:

>1059_bases
ATGAAACGTAAAGCTCTCACTTTTTCAATTCTCACTTTGGCTTGTTCTGCATTGGCTCACGCAGATCCTCTTGTTATTGC
ACATCGCGGAGCGTCGGGTTACTTACCTGAGCATACCTTGGAAGCAAAAACGCTTGCCTATGCGATGAAACCGGATTACA
TCGAACAAGATGTTGTCATGACTAAAGATGATCAACTTGTGATGTTGCATGATCACTATTTGGATCGTGTGACTGACGTT
GCTGAACGATTCCCCGATCGTGCTCGTGATGATGGTCGTTATTATGCGATTGATTTTACATTGGCAGAGATAAAAAGCTT
ACGCGTAACAGAAGGTTTTAACGTTGATGATAAAGGGAATAAAGTGGCTGGCTACCCAGCTCGCTTTCCTATGTGGAAAT
CGAGCTTCACAGTGCCTACTTTCGCTGAAGAGATTGAATTGATCCAAGGATTAAATCAAACATTAGGGTATGACATTGGC
CTCTATCCTGAAATTAAAGCACCTTGGTTTCATCGGCATGAAGGGAAAGACATCAGTAAAGCGGTGTTAAAAGTATTAAA
AGATTACGGTTACGACAGCAAAGACGACAAAATTTATCTGCAATCTTTTGATCCGATAGAGCTAAAACGAATTAATGATG
AGTTATTACCAGCCATGAATATGGATTTGAAACTCGTTCAATTGATTGCCTATACGGATTGGGATGAAACTATGACGTAC
AATGGTGAGCTCGCACAGCCTTACAGTTACGATTGGATGTTTAAGTCGGATGGAATGAAAAAAGTTGCCGCTTACGCTGA
TGGAATTGGTCCTTGGAAACCAATGTTAGTTGACGATGCATCAACCAAAGATAACATTATTATCAAGCCATTAATGAAAC
AAGCTAAAGAGGCCGGATTGGTGGTTCATCCATTTACTTTCCGTGCTGAACCTGATCGTATTGCACCTTACGCGACGAGT
TTTGAAAATATGCTAGATGTGTTTTATAACACAGTGAAAGTCGATGGGGTATTTACGGATTATCCAGATAAAGCGGTGAA
ATTTTTGGACAAACAATGA

Upstream 100 bases:

>100_bases
TATATGAGTTTAGTTTTTGTATACACAAACTGTGATTATCAGTAACTAAATTATAATGGCTTTCCCCCTACCGTTGTAGG
GGGCTTTAAAGGATTAAATA

Downstream 100 bases:

>100_bases
TTAATATACATTGGTGGTTGTTTTGAATTTATAACGTGCTCTAAAGTGAGTAAGCACAAAAAAGGCAGTAATAAATACTG
CCTTTTTACTACCTATCAAA

Product: glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MKRKALTFSILTLACSALAHADPLVIAHRGASGYLPEHTLEAKTLAYAMKPDYIEQDVVMTKDDQLVMLHDHYLDRVTDV
AERFPDRARDDGRYYAIDFTLAEIKSLRVTEGFNVDDKGNKVAGYPARFPMWKSSFTVPTFAEEIELIQGLNQTLGYDIG
LYPEIKAPWFHRHEGKDISKAVLKVLKDYGYDSKDDKIYLQSFDPIELKRINDELLPAMNMDLKLVQLIAYTDWDETMTY
NGELAQPYSYDWMFKSDGMKKVAAYADGIGPWKPMLVDDASTKDNIIIKPLMKQAKEAGLVVHPFTFRAEPDRIAPYATS
FENMLDVFYNTVKVDGVFTDYPDKAVKFLDKQ

Sequences:

>Translated_352_residues
MKRKALTFSILTLACSALAHADPLVIAHRGASGYLPEHTLEAKTLAYAMKPDYIEQDVVMTKDDQLVMLHDHYLDRVTDV
AERFPDRARDDGRYYAIDFTLAEIKSLRVTEGFNVDDKGNKVAGYPARFPMWKSSFTVPTFAEEIELIQGLNQTLGYDIG
LYPEIKAPWFHRHEGKDISKAVLKVLKDYGYDSKDDKIYLQSFDPIELKRINDELLPAMNMDLKLVQLIAYTDWDETMTY
NGELAQPYSYDWMFKSDGMKKVAAYADGIGPWKPMLVDDASTKDNIIIKPLMKQAKEAGLVVHPFTFRAEPDRIAPYATS
FENMLDVFYNTVKVDGVFTDYPDKAVKFLDKQ
>Mature_352_residues
MKRKALTFSILTLACSALAHADPLVIAHRGASGYLPEHTLEAKTLAYAMKPDYIEQDVVMTKDDQLVMLHDHYLDRVTDV
AERFPDRARDDGRYYAIDFTLAEIKSLRVTEGFNVDDKGNKVAGYPARFPMWKSSFTVPTFAEEIELIQGLNQTLGYDIG
LYPEIKAPWFHRHEGKDISKAVLKVLKDYGYDSKDDKIYLQSFDPIELKRINDELLPAMNMDLKLVQLIAYTDWDETMTY
NGELAQPYSYDWMFKSDGMKKVAAYADGIGPWKPMLVDDASTKDNIIIKPLMKQAKEAGLVVHPFTFRAEPDRIAPYATS
FENMLDVFYNTVKVDGVFTDYPDKAVKFLDKQ

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Escherichia coli, GI1788572, Length=356, Percent_Identity=59.2696629213483, Blast_Score=422, Evalue=1e-119,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 40206; Mature: 40206

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKALTFSILTLACSALAHADPLVIAHRGASGYLPEHTLEAKTLAYAMKPDYIEQDVVM
CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHEEECCCCCCCCCEEE
TKDDQLVMLHDHYLDRVTDVAERFPDRARDDGRYYAIDFTLAEIKSLRVTEGFNVDDKGN
ECCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHEEEECCCCCCCCCC
KVAGYPARFPMWKSSFTVPTFAEEIELIQGLNQTLGYDIGLYPEIKAPWFHRHEGKDISK
EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
AVLKVLKDYGYDSKDDKIYLQSFDPIELKRINDELLPAMNMDLKLVQLIAYTDWDETMTY
HHHHHHHHCCCCCCCCEEEEECCCCEEEECCCHHHCCCCCCCHHEEEHHHCCCCCCCEEE
NGELAQPYSYDWMFKSDGMKKVAAYADGIGPWKPMLVDDASTKDNIIIKPLMKQAKEAGL
CCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCEEEECCCCCCCEEEHHHHHHHHHCCE
VVHPFTFRAEPDRIAPYATSFENMLDVFYNTVKVDGVFTDYPDKAVKFLDKQ
EEECEEECCCCCCCCCHHHHHHHHHHHHHHHEEECEEEECCCHHHHHHHCCC
>Mature Secondary Structure
MKRKALTFSILTLACSALAHADPLVIAHRGASGYLPEHTLEAKTLAYAMKPDYIEQDVVM
CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHEEECCCCCCCCCEEE
TKDDQLVMLHDHYLDRVTDVAERFPDRARDDGRYYAIDFTLAEIKSLRVTEGFNVDDKGN
ECCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHEEEECCCCCCCCCC
KVAGYPARFPMWKSSFTVPTFAEEIELIQGLNQTLGYDIGLYPEIKAPWFHRHEGKDISK
EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
AVLKVLKDYGYDSKDDKIYLQSFDPIELKRINDELLPAMNMDLKLVQLIAYTDWDETMTY
HHHHHHHHCCCCCCCCEEEEECCCCEEEECCCHHHCCCCCCCHHEEEHHHCCCCCCCEEE
NGELAQPYSYDWMFKSDGMKKVAAYADGIGPWKPMLVDDASTKDNIIIKPLMKQAKEAGL
CCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCEEEECCCCCCCEEEHHHHHHHHHCCE
VVHPFTFRAEPDRIAPYATSFENMLDVFYNTVKVDGVFTDYPDKAVKFLDKQ
EEECEEECCCCCCCCCHHHHHHHHHHHHHHHEEECEEEECCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1851953; 9205837; 9278503; 3329281; 8899705 [H]