| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209694836
Identifier: 209694836
GI number: 209694836
Start: 1413903
End: 1414646
Strand: Reverse
Name: 209694836
Synonym: VSAL_I1302
Alternate gene names: NA
Gene position: 1414646-1413903 (Counterclockwise)
Preceding gene: 209694837
Following gene: 209694828
Centisome position: 42.54
GC content: 38.58
Gene sequence:
>744_bases ATGTCCTCTAACGCTTTATATACTGATCTGTCTGGTTACTACGATTTAATGTGTGCAGACATCGATTATCATGAGCAAAG TAATTATGTACGCCGAATTCATCAGATTTTCGGTAATCAAGGAAGAAACTACCTTGATTTAGCTTGTGGGACAGGACCAC ACGTTAAACACTTTATTAACTATGGTTATCAAGCAAAAGGCTTAGACATTAATCAACCGATGCTTGATCTTGCAAAGCTG CGTAACCCTGATGCTGAATTTATTTTGCATGACATGAGTAACTTTACTGTTGATAAACCTTTAGACTTAATCACCTGTTT TCTTTATTCAATTCATTACAATGCAAATATTGAAAAGTTAGCAGAATGCATTGAAAGTGTTCATGCGGCATTAAAAACAG ATGGCGTATTCTGCTTTAACTCGGTAGCAAGAAATAAGATTGATAATCGCTCATTTGTAAAGCACCCAGCAGAACATGAA GGCAGCCAGTTTACGTTTCAATCAGGTTGGAATTACAGTGGCCAAGGGGATGGGCAGCATTTATTGTTGAAGATCGAGAA AACAACAGATGGCGTAACCGAAATTTGGGATGATAAACACCCAATGGTCGCCGTAGATTTTGAACAACTGCAAGCGCTGT TAGAACCGTACTTTGAGGTTCACTTGTTTGAGCATGATTACGAAAAGATAACGCCTCTTGAGACATCGTCAGGCAATTCC ATTGTCGTCTGTATCAAAAAGTAG
Upstream 100 bases:
>100_bases CTTACAAAGTTACTTATCTAACGCACTTCTTTTATACCTCTCAAAATAAGCAGTTAATTAAACACTTAAAAGAGATTGGT ATTGTTATGGATAAGTACAA
Downstream 100 bases:
>100_bases CAACGCAATAACTATATTTAGAACATAAAAAATCCGCCTATCTAAGGCGGATTTTTATTAAACCTAAATACAGAAATAAA GGCTTATAAGTAGTTTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; S-Adenosylmethionine-Dependent Methyltransferase; N N-Dimethyltransferase; Siderophore Biosynthesis Protein; Methyltransferase Domain Family
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSSNALYTDLSGYYDLMCADIDYHEQSNYVRRIHQIFGNQGRNYLDLACGTGPHVKHFINYGYQAKGLDINQPMLDLAKL RNPDAEFILHDMSNFTVDKPLDLITCFLYSIHYNANIEKLAECIESVHAALKTDGVFCFNSVARNKIDNRSFVKHPAEHE GSQFTFQSGWNYSGQGDGQHLLLKIEKTTDGVTEIWDDKHPMVAVDFEQLQALLEPYFEVHLFEHDYEKITPLETSSGNS IVVCIKK
Sequences:
>Translated_247_residues MSSNALYTDLSGYYDLMCADIDYHEQSNYVRRIHQIFGNQGRNYLDLACGTGPHVKHFINYGYQAKGLDINQPMLDLAKL RNPDAEFILHDMSNFTVDKPLDLITCFLYSIHYNANIEKLAECIESVHAALKTDGVFCFNSVARNKIDNRSFVKHPAEHE GSQFTFQSGWNYSGQGDGQHLLLKIEKTTDGVTEIWDDKHPMVAVDFEQLQALLEPYFEVHLFEHDYEKITPLETSSGNS IVVCIKK >Mature_246_residues SSNALYTDLSGYYDLMCADIDYHEQSNYVRRIHQIFGNQGRNYLDLACGTGPHVKHFINYGYQAKGLDINQPMLDLAKLR NPDAEFILHDMSNFTVDKPLDLITCFLYSIHYNANIEKLAECIESVHAALKTDGVFCFNSVARNKIDNRSFVKHPAEHEG SQFTFQSGWNYSGQGDGQHLLLKIEKTTDGVTEIWDDKHPMVAVDFEQLQALLEPYFEVHLFEHDYEKITPLETSSGNSI VVCIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28207; Mature: 28076
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNALYTDLSGYYDLMCADIDYHEQSNYVRRIHQIFGNQGRNYLDLACGTGPHVKHFIN CCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH YGYQAKGLDINQPMLDLAKLRNPDAEFILHDMSNFTVDKPLDLITCFLYSIHYNANIEKL CCCEECCCCCCCHHHHHHHHCCCCHHEEEEHHCCCCCCCHHHHHHHHHHHHCCCCCHHHH AECIESVHAALKTDGVFCFNSVARNKIDNRSFVKHPAEHEGSQFTFQSGWNYSGQGDGQH HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCE LLLKIEKTTDGVTEIWDDKHPMVAVDFEQLQALLEPYFEVHLFEHDYEKITPLETSSGNS EEEEEECCCCCHHHHHCCCCCEEEECHHHHHHHHHHHHHEEEEECCHHHCCCCCCCCCCE IVVCIKK EEEEEEC >Mature Secondary Structure SSNALYTDLSGYYDLMCADIDYHEQSNYVRRIHQIFGNQGRNYLDLACGTGPHVKHFIN CCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH YGYQAKGLDINQPMLDLAKLRNPDAEFILHDMSNFTVDKPLDLITCFLYSIHYNANIEKL CCCEECCCCCCCHHHHHHHHCCCCHHEEEEHHCCCCCCCHHHHHHHHHHHHCCCCCHHHH AECIESVHAALKTDGVFCFNSVARNKIDNRSFVKHPAEHEGSQFTFQSGWNYSGQGDGQH HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCE LLLKIEKTTDGVTEIWDDKHPMVAVDFEQLQALLEPYFEVHLFEHDYEKITPLETSSGNS EEEEEECCCCCHHHHHCCCCCEEEECHHHHHHHHHHHHHEEEEECCHHHCCCCCCCCCCE IVVCIKK EEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA