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The map label for this gene is 209694824

Identifier: 209694824

GI number: 209694824

Start: 1398517

End: 1399893

Strand: Direct

Name: 209694824

Synonym: VSAL_I1289

Alternate gene names: NA

Gene position: 1398517-1399893 (Clockwise)

Preceding gene: 209694823

Following gene: 209694825

Centisome position: 42.06

GC content: 38.93

Gene sequence:

>1377_bases
ATGAGTCAGGGAATGGCGGGACAATTACATAATATACCCGCAGTAAGTAATGTCATTCTTCATGCGTTCGACTGGACCTA
TCAAAGCATTGCTGAACAAGCAGAGCAGATTGCCGCATTAGGGTATCGTTCTGTGTTGGTTTCCCCTGCAATGAAATCAC
TTCAATTACCCTCGGGTACTCAGTGGTGGCAGCGCTATCAACCTCAAGACTATCGTTTGATTGATAATCCATTAGGCAAT
ACCTCTGATTTTAAACATATGATAGAGCGTCTTGCTGAATTTAATTTATGGGTTTATGTCGATGTTGTGTTTAATCACAT
GGCAAACGAATCAGACATTCGAGCGGATCTTCAATACCCAAATCGATGGGATAGAGAGGATTACGAAAAAGACCCGATAA
AATATCACGCGTTAACGCTGTTTGGTGATCTCTCTGAACCTCTTTTTACTGAACCTGATTTTGTTGATGCTTTTGGTATT
GAGAATTGGAATGATAAATGGGAAGTTCAAAATGGCCGCATATCTGGGGGACCTCATGATCCAGGTTTACCTACCTTAAT
TGATAATGAACATGTTGTTGAGCAACAGCGTGCTTATTTATTGGCATTGAAGTCGATGGGAGTAAAAGGTTTTCGTATTG
ATGCAGCAAAGCACATGAGCCTTGAACACCTAAATAAAGTATGGACTGACGATATAACCAATGATGTACATATCTTTGGT
GAGATAATTACTGACGGTGGAGCAACAAAAGAAGAGTATGAGACGTTTTTAAGTCCCTATTTAATGGGAACCACGTTAGG
TGCTTACGACTTTCCTTTATTTAATATTCTTTATCAAGCGTTTGAGAAAAAAGGGTCGTTAACGTCATTAATCGATCCTT
ATTGCTATGGCTTGGCTTTGTCTCCTTTACGTGCGATTACTTTTGCCATTACTCATGATATTCCGAATAACCAAGTATTT
AAAAGTTTGGTGATGAGTGAGCATAACGAGTGGTTAGCTTATGCGTATTTATTTGGTAGAGAAGGGGGGATCCCGTTGGT
TTATTCGGATTTAGATACCAGTGGTATCACTAATTCATTTGGTTCCCCACGCTGGAAAAACGCATGGAAAGAAGAAAAAA
TGTCAGGATTGATTCATTTTCATCATCGTATGTATGGAGAAGGGCAAACTTTGATTGAAGCGAGTGACGATCATCTTGTT
TTTGCACGAGGAGATCAAGGTATTGTGGCGTTAAATAAATCGAACAAGAATATTGAAGTGAGTATGTCATCGGACAGTGA
GTGGAGAGAGTTTTCATCCAATCAATTGTGTCAGAAAAAAGAAGGCGTACTTGTGTTTAGTATTCCTAAATATTCTTATC
TTTTATTGTGTCATTAA

Upstream 100 bases:

>100_bases
CGCCTTACTGCTCCTACTGTATTTTATAGAGTAAGGGAGGAGGAGTAAGGTGAACGGCTTTTTTATAATAGAATGACGTT
ATACAAAAAGGGATACACAA

Downstream 100 bases:

>100_bases
TCGATGTGTAAACAATGACAGTATGGCTCAAATTGAGTGGTTGAAAAGAAAAGGGTTGAATGTGTGAATATGTATTCAAC
CCTTTGTGTCAGAAATATAA

Product: alkaline-resistant alpha-amylase precursor

Products: NA

Alternate protein names: 1,4-alpha-D-glucan glucanohydrolase [H]

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MSQGMAGQLHNIPAVSNVILHAFDWTYQSIAEQAEQIAALGYRSVLVSPAMKSLQLPSGTQWWQRYQPQDYRLIDNPLGN
TSDFKHMIERLAEFNLWVYVDVVFNHMANESDIRADLQYPNRWDREDYEKDPIKYHALTLFGDLSEPLFTEPDFVDAFGI
ENWNDKWEVQNGRISGGPHDPGLPTLIDNEHVVEQQRAYLLALKSMGVKGFRIDAAKHMSLEHLNKVWTDDITNDVHIFG
EIITDGGATKEEYETFLSPYLMGTTLGAYDFPLFNILYQAFEKKGSLTSLIDPYCYGLALSPLRAITFAITHDIPNNQVF
KSLVMSEHNEWLAYAYLFGREGGIPLVYSDLDTSGITNSFGSPRWKNAWKEEKMSGLIHFHHRMYGEGQTLIEASDDHLV
FARGDQGIVALNKSNKNIEVSMSSDSEWREFSSNQLCQKKEGVLVFSIPKYSYLLLCH

Sequences:

>Translated_458_residues
MSQGMAGQLHNIPAVSNVILHAFDWTYQSIAEQAEQIAALGYRSVLVSPAMKSLQLPSGTQWWQRYQPQDYRLIDNPLGN
TSDFKHMIERLAEFNLWVYVDVVFNHMANESDIRADLQYPNRWDREDYEKDPIKYHALTLFGDLSEPLFTEPDFVDAFGI
ENWNDKWEVQNGRISGGPHDPGLPTLIDNEHVVEQQRAYLLALKSMGVKGFRIDAAKHMSLEHLNKVWTDDITNDVHIFG
EIITDGGATKEEYETFLSPYLMGTTLGAYDFPLFNILYQAFEKKGSLTSLIDPYCYGLALSPLRAITFAITHDIPNNQVF
KSLVMSEHNEWLAYAYLFGREGGIPLVYSDLDTSGITNSFGSPRWKNAWKEEKMSGLIHFHHRMYGEGQTLIEASDDHLV
FARGDQGIVALNKSNKNIEVSMSSDSEWREFSSNQLCQKKEGVLVFSIPKYSYLLLCH
>Mature_457_residues
SQGMAGQLHNIPAVSNVILHAFDWTYQSIAEQAEQIAALGYRSVLVSPAMKSLQLPSGTQWWQRYQPQDYRLIDNPLGNT
SDFKHMIERLAEFNLWVYVDVVFNHMANESDIRADLQYPNRWDREDYEKDPIKYHALTLFGDLSEPLFTEPDFVDAFGIE
NWNDKWEVQNGRISGGPHDPGLPTLIDNEHVVEQQRAYLLALKSMGVKGFRIDAAKHMSLEHLNKVWTDDITNDVHIFGE
IITDGGATKEEYETFLSPYLMGTTLGAYDFPLFNILYQAFEKKGSLTSLIDPYCYGLALSPLRAITFAITHDIPNNQVFK
SLVMSEHNEWLAYAYLFGREGGIPLVYSDLDTSGITNSFGSPRWKNAWKEEKMSGLIHFHHRMYGEGQTLIEASDDHLVF
ARGDQGIVALNKSNKNIEVSMSSDSEWREFSSNQLCQKKEGVLVFSIPKYSYLLLCH

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI56549664, Length=308, Percent_Identity=26.6233766233766, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI56549662, Length=308, Percent_Identity=26.6233766233766, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI40254482, Length=308, Percent_Identity=26.6233766233766, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI56549660, Length=308, Percent_Identity=26.6233766233766, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI10280622, Length=312, Percent_Identity=25.6410256410256, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17558728, Length=443, Percent_Identity=24.6049661399549, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24654362, Length=447, Percent_Identity=26.3982102908277, Blast_Score=102, Evalue=8e-22,
Organism=Drosophila melanogaster, GI18859631, Length=447, Percent_Identity=26.3982102908277, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI17137384, Length=444, Percent_Identity=25.4504504504505, Blast_Score=100, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006046
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.1 [H]

Molecular weight: Translated: 52258; Mature: 52127

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQGMAGQLHNIPAVSNVILHAFDWTYQSIAEQAEQIAALGYRSVLVSPAMKSLQLPSGT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QWWQRYQPQDYRLIDNPLGNTSDFKHMIERLAEFNLWVYVDVVFNHMANESDIRADLQYP
HHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCCCEEECCCC
NRWDREDYEKDPIKYHALTLFGDLSEPLFTEPDFVDAFGIENWNDKWEVQNGRISGGPHD
CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCEEECCCEECCCCCC
PGLPTLIDNEHVVEQQRAYLLALKSMGVKGFRIDAAKHMSLEHLNKVWTDDITNDVHIFG
CCCCCEECCHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCHHHHHHHHHHCCCCCCEEEE
EIITDGGATKEEYETFLSPYLMGTTLGAYDFPLFNILYQAFEKKGSLTSLIDPYCYGLAL
EEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SPLRAITFAITHDIPNNQVFKSLVMSEHNEWLAYAYLFGREGGIPLVYSDLDTSGITNSF
HHHHHEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCC
GSPRWKNAWKEEKMSGLIHFHHRMYGEGQTLIEASDDHLVFARGDQGIVALNKSNKNIEV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCEEEEECCCCEEEE
SMSSDSEWREFSSNQLCQKKEGVLVFSIPKYSYLLLCH
EECCCCHHHHHCCCHHHHHHCCEEEEEECCCEEEEEEC
>Mature Secondary Structure 
SQGMAGQLHNIPAVSNVILHAFDWTYQSIAEQAEQIAALGYRSVLVSPAMKSLQLPSGT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QWWQRYQPQDYRLIDNPLGNTSDFKHMIERLAEFNLWVYVDVVFNHMANESDIRADLQYP
HHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCCCEEECCCC
NRWDREDYEKDPIKYHALTLFGDLSEPLFTEPDFVDAFGIENWNDKWEVQNGRISGGPHD
CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCCCEEECCCEECCCCCC
PGLPTLIDNEHVVEQQRAYLLALKSMGVKGFRIDAAKHMSLEHLNKVWTDDITNDVHIFG
CCCCCEECCHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCHHHHHHHHHHCCCCCCEEEE
EIITDGGATKEEYETFLSPYLMGTTLGAYDFPLFNILYQAFEKKGSLTSLIDPYCYGLAL
EEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SPLRAITFAITHDIPNNQVFKSLVMSEHNEWLAYAYLFGREGGIPLVYSDLDTSGITNSF
HHHHHEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCC
GSPRWKNAWKEEKMSGLIHFHHRMYGEGQTLIEASDDHLVFARGDQGIVALNKSNKNIEV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCEEEEECCCCEEEE
SMSSDSEWREFSSNQLCQKKEGVLVFSIPKYSYLLLCH
EECCCCHHHHHCCCHHHHHHCCEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2449422 [H]