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The map label for this gene is 209694822

Identifier: 209694822

GI number: 209694822

Start: 1397327

End: 1397785

Strand: Reverse

Name: 209694822

Synonym: VSAL_I1287

Alternate gene names: NA

Gene position: 1397785-1397327 (Counterclockwise)

Preceding gene: 209694828

Following gene: 209694821

Centisome position: 42.04

GC content: 41.83

Gene sequence:

>459_bases
ATGACGAAAGGTTACTCTTGTATTGGATTGGTAAACCCAAAAACACCTGAAAATGTAGGCTCAGTAATGCGAGCGGCAGG
TTGCTATGGCGTAAACTCGGTATTTTACACGGGAAGACGTTACGATATTGCCAAGAAATTTTGTACTGATACAAAAAGTC
AGCACCTCAATGTGCCACTTATTGGTGTTGAAGATCTTAAAGATATTATTCCTTTAGATTGTGTTCCTGTTGCTGTCGAT
CTTATCGAAGGCGCAAAGCCGTTACCAGATTACAAGCACCCTCCTCGTGCGTTTTATATTTTTGGCCCTGAAGACGGTAC
ATTGAAAAAAGAGATCACTGATTTCTGCCGTGAAACCATTTATGTACCTACCAATGGCTGCATGAACTTAGCGGCTGCTG
TGAATGTGATCATGTACGATCGCATGGCGAAAGGTGAAAACTTCTCAAACCATAAGTAG

Upstream 100 bases:

>100_bases
TTCATATTTCACCTTCCTAGGAAATTATCTAATGAGTCTATATGAATCCCTTTAATTTAGGTATACTTCGCCCAAATTTT
GTATTGGAAAGACAGTAATA

Downstream 100 bases:

>100_bases
CCTACATTTAAACTAAATAAAGGAACTCGAACATGTTTGATTTATCACGTATTTCGGGTTTCGAAAACGCATCAATTCGC
CAGACTGACACTTTACAAAT

Product: RNA methyltransferase

Products: NA

Alternate protein names: RNA Methyltransferase; 23S RRNA Methyltransferase; RNA Methyltransferase TrmH Family; Cold-Shock RNA Methyltransferase; rRNA Methylase; TrmH Family RNA Methyltransferase; TRNA/RRNA MethyltransferaU; rRNA Methyltransferase; SpoU RRNA Methylase Family Protein; SpoU Class RRNA Methylase

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MTKGYSCIGLVNPKTPENVGSVMRAAGCYGVNSVFYTGRRYDIAKKFCTDTKSQHLNVPLIGVEDLKDIIPLDCVPVAVD
LIEGAKPLPDYKHPPRAFYIFGPEDGTLKKEITDFCRETIYVPTNGCMNLAAAVNVIMYDRMAKGENFSNHK

Sequences:

>Translated_152_residues
MTKGYSCIGLVNPKTPENVGSVMRAAGCYGVNSVFYTGRRYDIAKKFCTDTKSQHLNVPLIGVEDLKDIIPLDCVPVAVD
LIEGAKPLPDYKHPPRAFYIFGPEDGTLKKEITDFCRETIYVPTNGCMNLAAAVNVIMYDRMAKGENFSNHK
>Mature_151_residues
TKGYSCIGLVNPKTPENVGSVMRAAGCYGVNSVFYTGRRYDIAKKFCTDTKSQHLNVPLIGVEDLKDIIPLDCVPVAVDL
IEGAKPLPDYKHPPRAFYIFGPEDGTLKKEITDFCRETIYVPTNGCMNLAAAVNVIMYDRMAKGENFSNHK

Specific function: Unknown

COG id: COG0219

COG function: function code J; Predicted rRNA methylase (SpoU class)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16826; Mature: 16694

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKGYSCIGLVNPKTPENVGSVMRAAGCYGVNSVFYTGRRYDIAKKFCTDTKSQHLNVPL
CCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCE
IGVEDLKDIIPLDCVPVAVDLIEGAKPLPDYKHPPRAFYIFGPEDGTLKKEITDFCRETI
ECHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHEE
YVPTNGCMNLAAAVNVIMYDRMAKGENFSNHK
ECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TKGYSCIGLVNPKTPENVGSVMRAAGCYGVNSVFYTGRRYDIAKKFCTDTKSQHLNVPL
CCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCE
IGVEDLKDIIPLDCVPVAVDLIEGAKPLPDYKHPPRAFYIFGPEDGTLKKEITDFCRETI
ECHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHEE
YVPTNGCMNLAAAVNVIMYDRMAKGENFSNHK
ECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA