Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is yaeQ [H]

Identifier: 209694802

GI number: 209694802

Start: 1371318

End: 1371857

Strand: Direct

Name: yaeQ [H]

Synonym: VSAL_I1262

Alternate gene names: 209694802

Gene position: 1371318-1371857 (Clockwise)

Preceding gene: 209694801

Following gene: 209694803

Centisome position: 41.24

GC content: 41.3

Gene sequence:

>540_bases
GTGGCTATCAAACCAACCATCTACAAATTTCGTATCGCGTTAACAGACTTGAATCGTGATCATTATGATTCAGTAAGCTT
AACCATTGCTCAGCACCCATCAGAAAGTGAAGAGCGTATGATGGCTCGTGTATTGGCATTTTGTTTGAATGCTGAAGAGC
GTTTAACGTTTACGAAAGGATTGTCTGCGATTGATGAGCCGGATATTTGGGTTCGTGAATACGATGATACGATCTCTCTT
TGGATTGATGCAGGTGAGCCTGATCCTGAGCGTATGAAAAAAGCGTCACGCCAGTCTAAAGTGACTAAGGTGTACAGCTT
TAACTCAAAATCTGAAGTGTGGTGGAAGCAAAACCAAAGTAAATTCAAACAGTATCCTGTTGATGTGGTTCGTTTTGATT
CTGTTCAAATACACTCATTTTCTGCATTGTTAGAAAGAACGATGGAAATGTCAGTGATGATCACAGGCGATTCAGCGTTT
ATTTCAGCTGCGAAAGGTGACTGCGAAGTGACATGGGAAACCTTGCAATCGGTTGAATAA

Upstream 100 bases:

>100_bases
TTAAGGCCTCGCAGGTACCACTGTGAGGTCTTTTTTTATGCCTAGCTAAGCAACAAGAATCGCGTACAATGCCTTCAATT
CTCAATAGTTAGGAAAGCCA

Downstream 100 bases:

>100_bases
ATTCGAAAGGGTAAGCGTGTAATACTGCTGTTTCCTTTCTAACATCTAGTTCATAATGCCTTCTGATATTACTATCATAA
TAGAAGGCATTTTTTATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MAIKPTIYKFRIALTDLNRDHYDSVSLTIAQHPSESEERMMARVLAFCLNAEERLTFTKGLSAIDEPDIWVREYDDTISL
WIDAGEPDPERMKKASRQSKVTKVYSFNSKSEVWWKQNQSKFKQYPVDVVRFDSVQIHSFSALLERTMEMSVMITGDSAF
ISAAKGDCEVTWETLQSVE

Sequences:

>Translated_179_residues
MAIKPTIYKFRIALTDLNRDHYDSVSLTIAQHPSESEERMMARVLAFCLNAEERLTFTKGLSAIDEPDIWVREYDDTISL
WIDAGEPDPERMKKASRQSKVTKVYSFNSKSEVWWKQNQSKFKQYPVDVVRFDSVQIHSFSALLERTMEMSVMITGDSAF
ISAAKGDCEVTWETLQSVE
>Mature_178_residues
AIKPTIYKFRIALTDLNRDHYDSVSLTIAQHPSESEERMMARVLAFCLNAEERLTFTKGLSAIDEPDIWVREYDDTISLW
IDAGEPDPERMKKASRQSKVTKVYSFNSKSEVWWKQNQSKFKQYPVDVVRFDSVQIHSFSALLERTMEMSVMITGDSAFI
SAAKGDCEVTWETLQSVE

Specific function: Unknown

COG id: COG4681

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786388, Length=173, Percent_Identity=42.7745664739884, Blast_Score=145, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009822 [H]

Pfam domain/function: PF07152 YaeQ [H]

EC number: NA

Molecular weight: Translated: 20645; Mature: 20513

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKPTIYKFRIALTDLNRDHYDSVSLTIAQHPSESEERMMARVLAFCLNAEERLTFTKG
CCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHEEHHHC
LSAIDEPDIWVREYDDTISLWIDAGEPDPERMKKASRQSKVTKVYSFNSKSEVWWKQNQS
CCCCCCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHEEEEECCCCCCEEECCCHH
KFKQYPVDVVRFDSVQIHSFSALLERTMEMSVMITGDSAFISAAKGDCEVTWETLQSVE
HHHHCCCEEEEECCEEEHHHHHHHHHHHEEEEEEECCCCEEEECCCCCEEEHHHHHCCC
>Mature Secondary Structure 
AIKPTIYKFRIALTDLNRDHYDSVSLTIAQHPSESEERMMARVLAFCLNAEERLTFTKG
CCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHEEHHHC
LSAIDEPDIWVREYDDTISLWIDAGEPDPERMKKASRQSKVTKVYSFNSKSEVWWKQNQS
CCCCCCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHEEEEECCCCCCEEECCCHH
KFKQYPVDVVRFDSVQIHSFSALLERTMEMSVMITGDSAFISAAKGDCEVTWETLQSVE
HHHHCCCEEEEECCEEEHHHHHHHHHHHEEEEEEECCCCEEEECCCCCEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]