Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694762

Identifier: 209694762

GI number: 209694762

Start: 1324786

End: 1325310

Strand: Reverse

Name: 209694762

Synonym: VSAL_I1217

Alternate gene names: NA

Gene position: 1325310-1324786 (Counterclockwise)

Preceding gene: 209694766

Following gene: 209694758

Centisome position: 39.86

GC content: 34.29

Gene sequence:

>525_bases
ATGACTATGCTTTCTGATATAACTCTTACTCCTTTTTCTAATTCATTAAATGTTGCCATTCATTTAATGACTAAAGCAAA
AGCACATTTTGAGGCACAAAATCGAAATACAAATGACATCGTTGATCTTCAATTAGTTGATGATATGCTTCCTCTTTCAT
TCCAAGTAAATTCAATTTGTAAGCATACTCTTGGGGCAACAAAAGCCGTATTAAGCGGTAACTTTTATATTCCATCACCT
TTAGGTGAAATTGATTTTAATGGCTTAATTGAATTACTTCAAAATACACAAAAAGAGTTGAGTGCAATTACAGAAAATGA
GGTAAATTCACGCTCAGGTGAAACCGTTATTTTCCACTATCCAGAACGACCAATGCCGTTTACTGCTGAGAATTTCATTA
CCTCATTCTCAACACCAAATCTATACTTTCACCAGACCACGCTGTACAACTTACTTCGAAAAGAAGGCGTACCATTGAGT
AAATTAGATTTCATTGGTGCTTTATCTCTTAGCCCTTCAGAATAA

Upstream 100 bases:

>100_bases
TGATCGTTAGGTGGGCAATTAGTTCAGCCTTATCCAGAATTCAGGTTAATTATTATTTACCTACATTGAACTCACTTTCG
TCATTAATAAAGGAACTCTC

Downstream 100 bases:

>100_bases
AGTTCACAATAGCCAATTAAAAAAGCCCTGTTTAGCAATCACTAGACAGGGCTTAAATAGAACCAAGGTATTATTAATCG
GTTGTTTTACTATCCAAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTMLSDITLTPFSNSLNVAIHLMTKAKAHFEAQNRNTNDIVDLQLVDDMLPLSFQVNSICKHTLGATKAVLSGNFYIPSP
LGEIDFNGLIELLQNTQKELSAITENEVNSRSGETVIFHYPERPMPFTAENFITSFSTPNLYFHQTTLYNLLRKEGVPLS
KLDFIGALSLSPSE

Sequences:

>Translated_174_residues
MTMLSDITLTPFSNSLNVAIHLMTKAKAHFEAQNRNTNDIVDLQLVDDMLPLSFQVNSICKHTLGATKAVLSGNFYIPSP
LGEIDFNGLIELLQNTQKELSAITENEVNSRSGETVIFHYPERPMPFTAENFITSFSTPNLYFHQTTLYNLLRKEGVPLS
KLDFIGALSLSPSE
>Mature_173_residues
TMLSDITLTPFSNSLNVAIHLMTKAKAHFEAQNRNTNDIVDLQLVDDMLPLSFQVNSICKHTLGATKAVLSGNFYIPSPL
GEIDFNGLIELLQNTQKELSAITENEVNSRSGETVIFHYPERPMPFTAENFITSFSTPNLYFHQTTLYNLLRKEGVPLSK
LDFIGALSLSPSE

Specific function: Unknown

COG id: COG3812

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19409; Mature: 19278

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00079 MULTICOPPER_OXIDASE1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMLSDITLTPFSNSLNVAIHLMTKAKAHFEAQNRNTNDIVDLQLVDDMLPLSFQVNSIC
CCCCCCEEECCCCCCCEEEEEEEEHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEHHHHH
KHTLGATKAVLSGNFYIPSPLGEIDFNGLIELLQNTQKELSAITENEVNSRSGETVIFHY
HHHHCHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
PERPMPFTAENFITSFSTPNLYFHQTTLYNLLRKEGVPLSKLDFIGALSLSPSE
CCCCCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCHHHHEEEECCCCCC
>Mature Secondary Structure 
TMLSDITLTPFSNSLNVAIHLMTKAKAHFEAQNRNTNDIVDLQLVDDMLPLSFQVNSIC
CCCCCEEECCCCCCCEEEEEEEEHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEHHHHH
KHTLGATKAVLSGNFYIPSPLGEIDFNGLIELLQNTQKELSAITENEVNSRSGETVIFHY
HHHHCHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
PERPMPFTAENFITSFSTPNLYFHQTTLYNLLRKEGVPLSKLDFIGALSLSPSE
CCCCCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCHHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA