Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

Click here to switch to the map view.

The map label for this gene is eamB [H]

Identifier: 209694758

GI number: 209694758

Start: 1322229

End: 1322831

Strand: Reverse

Name: eamB [H]

Synonym: VSAL_I1213

Alternate gene names: 209694758

Gene position: 1322831-1322229 (Counterclockwise)

Preceding gene: 209694762

Following gene: 209694757

Centisome position: 39.78

GC content: 38.81

Gene sequence:

>603_bases
ATGACTTTATTTTTAGCAATGGCAATGTTTGCACTCATCACCTCCCTCTCTCCTGGGCCGGTAAATATTCTCGCTACCAT
TACTGGTGCTAATCATGGGTATGTAAAAACCATTCCCCATATTTTTGGTGCTACTGTTGGGTTTGTCTCTATTCTTATCC
TATTAGGATTAGGGCTGATACAAGTCTTAGATAATTCCCATACTGCAACATCCATTTTAAATTACTTTGGAAGCACTTTT
CTGCTTTATTTGGCTTATAAAGTAGCGACGAGCGATAGAGCAGACCAAGATAGAGATAATAAAGGCAATGCTCCAACGAT
GGTGCAAGGCTTATTGTGTCAATGGTTAAACCCAAAAGCTTGGATTGTGTCTTTATCTGGCGTGACCGTATTTTCGAGTA
ACGGTGTGATTCCTCTCGAAGATCTTGGAGCGTTTAGTATGATATTTTTTATCGTATGTTACTGCTGTATATCGACGTGG
GCATTACTCGGGTTAACGATTGGACGATATTTAGAGCACCCTGTTCATTATAAAATCTTTAATCGACTTATGGGATCATT
GCTCGCATTAACCGTCGTTTATGTCTTCTTTATATCAAATTAA

Upstream 100 bases:

>100_bases
TATTTTCAGTAATCGACTTAATAAAAAACAGTTTTGTACAATCTTCATGTCGCTTTTATGAGTTATTGTATAAAGAACTC
AAGGATGAAAAAGAAAACTT

Downstream 100 bases:

>100_bases
CAATGGACGTTATATTGGCTAATTCAAAAACACATTTTTTACGATCATCCGTTCTTCCGTTTGAGTTACGTTATTCTGGT
AATTCAAATGCCTGCTATAA

Product: transporter LysE family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTLFLAMAMFALITSLSPGPVNILATITGANHGYVKTIPHIFGATVGFVSILILLGLGLIQVLDNSHTATSILNYFGSTF
LLYLAYKVATSDRADQDRDNKGNAPTMVQGLLCQWLNPKAWIVSLSGVTVFSSNGVIPLEDLGAFSMIFFIVCYCCISTW
ALLGLTIGRYLEHPVHYKIFNRLMGSLLALTVVYVFFISN

Sequences:

>Translated_200_residues
MTLFLAMAMFALITSLSPGPVNILATITGANHGYVKTIPHIFGATVGFVSILILLGLGLIQVLDNSHTATSILNYFGSTF
LLYLAYKVATSDRADQDRDNKGNAPTMVQGLLCQWLNPKAWIVSLSGVTVFSSNGVIPLEDLGAFSMIFFIVCYCCISTW
ALLGLTIGRYLEHPVHYKIFNRLMGSLLALTVVYVFFISN
>Mature_199_residues
TLFLAMAMFALITSLSPGPVNILATITGANHGYVKTIPHIFGATVGFVSILILLGLGLIQVLDNSHTATSILNYFGSTFL
LYLAYKVATSDRADQDRDNKGNAPTMVQGLLCQWLNPKAWIVSLSGVTVFSSNGVIPLEDLGAFSMIFFIVCYCCISTWA
LLGLTIGRYLEHPVHYKIFNRLMGSLLALTVVYVFFISN

Specific function: Exporter of O-acetylserine (OAS) and cysteine [H]

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21822; Mature: 21691

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLFLAMAMFALITSLSPGPVNILATITGANHGYVKTIPHIFGATVGFVSILILLGLGLI
CHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVLDNSHTATSILNYFGSTFLLYLAYKVATSDRADQDRDNKGNAPTMVQGLLCQWLNPKA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCE
WIVSLSGVTVFSSNGVIPLEDLGAFSMIFFIVCYCCISTWALLGLTIGRYLEHPVHYKIF
EEEEECCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
NRLMGSLLALTVVYVFFISN
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLFLAMAMFALITSLSPGPVNILATITGANHGYVKTIPHIFGATVGFVSILILLGLGLI
HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVLDNSHTATSILNYFGSTFLLYLAYKVATSDRADQDRDNKGNAPTMVQGLLCQWLNPKA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCE
WIVSLSGVTVFSSNGVIPLEDLGAFSMIFFIVCYCCISTWALLGLTIGRYLEHPVHYKIF
EEEEECCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
NRLMGSLLALTVVYVFFISN
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA