| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is eamB [H]
Identifier: 209694758
GI number: 209694758
Start: 1322229
End: 1322831
Strand: Reverse
Name: eamB [H]
Synonym: VSAL_I1213
Alternate gene names: 209694758
Gene position: 1322831-1322229 (Counterclockwise)
Preceding gene: 209694762
Following gene: 209694757
Centisome position: 39.78
GC content: 38.81
Gene sequence:
>603_bases ATGACTTTATTTTTAGCAATGGCAATGTTTGCACTCATCACCTCCCTCTCTCCTGGGCCGGTAAATATTCTCGCTACCAT TACTGGTGCTAATCATGGGTATGTAAAAACCATTCCCCATATTTTTGGTGCTACTGTTGGGTTTGTCTCTATTCTTATCC TATTAGGATTAGGGCTGATACAAGTCTTAGATAATTCCCATACTGCAACATCCATTTTAAATTACTTTGGAAGCACTTTT CTGCTTTATTTGGCTTATAAAGTAGCGACGAGCGATAGAGCAGACCAAGATAGAGATAATAAAGGCAATGCTCCAACGAT GGTGCAAGGCTTATTGTGTCAATGGTTAAACCCAAAAGCTTGGATTGTGTCTTTATCTGGCGTGACCGTATTTTCGAGTA ACGGTGTGATTCCTCTCGAAGATCTTGGAGCGTTTAGTATGATATTTTTTATCGTATGTTACTGCTGTATATCGACGTGG GCATTACTCGGGTTAACGATTGGACGATATTTAGAGCACCCTGTTCATTATAAAATCTTTAATCGACTTATGGGATCATT GCTCGCATTAACCGTCGTTTATGTCTTCTTTATATCAAATTAA
Upstream 100 bases:
>100_bases TATTTTCAGTAATCGACTTAATAAAAAACAGTTTTGTACAATCTTCATGTCGCTTTTATGAGTTATTGTATAAAGAACTC AAGGATGAAAAAGAAAACTT
Downstream 100 bases:
>100_bases CAATGGACGTTATATTGGCTAATTCAAAAACACATTTTTTACGATCATCCGTTCTTCCGTTTGAGTTACGTTATTCTGGT AATTCAAATGCCTGCTATAA
Product: transporter LysE family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTLFLAMAMFALITSLSPGPVNILATITGANHGYVKTIPHIFGATVGFVSILILLGLGLIQVLDNSHTATSILNYFGSTF LLYLAYKVATSDRADQDRDNKGNAPTMVQGLLCQWLNPKAWIVSLSGVTVFSSNGVIPLEDLGAFSMIFFIVCYCCISTW ALLGLTIGRYLEHPVHYKIFNRLMGSLLALTVVYVFFISN
Sequences:
>Translated_200_residues MTLFLAMAMFALITSLSPGPVNILATITGANHGYVKTIPHIFGATVGFVSILILLGLGLIQVLDNSHTATSILNYFGSTF LLYLAYKVATSDRADQDRDNKGNAPTMVQGLLCQWLNPKAWIVSLSGVTVFSSNGVIPLEDLGAFSMIFFIVCYCCISTW ALLGLTIGRYLEHPVHYKIFNRLMGSLLALTVVYVFFISN >Mature_199_residues TLFLAMAMFALITSLSPGPVNILATITGANHGYVKTIPHIFGATVGFVSILILLGLGLIQVLDNSHTATSILNYFGSTFL LYLAYKVATSDRADQDRDNKGNAPTMVQGLLCQWLNPKAWIVSLSGVTVFSSNGVIPLEDLGAFSMIFFIVCYCCISTWA LLGLTIGRYLEHPVHYKIFNRLMGSLLALTVVYVFFISN
Specific function: Exporter of O-acetylserine (OAS) and cysteine [H]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 21822; Mature: 21691
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFLAMAMFALITSLSPGPVNILATITGANHGYVKTIPHIFGATVGFVSILILLGLGLI CHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QVLDNSHTATSILNYFGSTFLLYLAYKVATSDRADQDRDNKGNAPTMVQGLLCQWLNPKA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCE WIVSLSGVTVFSSNGVIPLEDLGAFSMIFFIVCYCCISTWALLGLTIGRYLEHPVHYKIF EEEEECCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH NRLMGSLLALTVVYVFFISN HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLFLAMAMFALITSLSPGPVNILATITGANHGYVKTIPHIFGATVGFVSILILLGLGLI HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QVLDNSHTATSILNYFGSTFLLYLAYKVATSDRADQDRDNKGNAPTMVQGLLCQWLNPKA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCE WIVSLSGVTVFSSNGVIPLEDLGAFSMIFFIVCYCCISTWALLGLTIGRYLEHPVHYKIF EEEEECCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH NRLMGSLLALTVVYVFFISN HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA