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The map label for this gene is yfcA [C]

Identifier: 209694679

GI number: 209694679

Start: 1229341

End: 1230111

Strand: Reverse

Name: yfcA [C]

Synonym: VSAL_I1128

Alternate gene names: 209694679

Gene position: 1230111-1229341 (Counterclockwise)

Preceding gene: 209694680

Following gene: 209694678

Centisome position: 36.99

GC content: 41.63

Gene sequence:

>771_bases
ATGGAATTTCTTGAACCCTCGACCCTCATTATTTTAGGGTTAGTTGCTTTTGTCGCTGGATTTATTGACGCAGTTGCTGG
TGGTGGTGGTATGCTGACGGTTCCAGCATTGCTCTCTATTGGCTTACCCCCACACATTGCATTAGGCACAAATAAATTAG
CGGCTACTTTTGCATCATCGACAGCGGCAATCACCTATTTCAAAAAGAAGCTATTTGACCCTCAGTTTTGGAAAGCCTCA
TTTATAGCCACTTTACTTGGTGCAACTTGCGGAACCTTATTAGTCAATTATATTTCAACGGAATGGTTAGAAAAAGGCCT
ACCTCTTATTATTCTAGGTGCCGCTATTTATACGATTTGGCCGAATCGTTTAATCTCTGAGCAGAATCAATTACCAGAAA
AAACACCTAAGTTTAAAAAACAACAAATCATCCAAGGGTTGTCTTTAGGTTTTTATGATGGTGTTGCCGGCCCTGGCACT
GGTGCATTTTGGACGGTAAGTAGTATGGCACTTTATCGTCTTAATATCTTACTGGCTTCTGGTCTCGCTAAAGCCATGAA
TTTTACAAGTAATATCACCTCGCTTGTCACCTTCGCTATCCTTGGCCAGATAAACTGGGCGCTTGGTTTAACGATGGGGA
TTTGCCTGATGGTTGGTGCCTTCTTAGGTGCTCATTCTGCTATTCGTTTTGGTTCAAAATTCATTCGCCCTGTTTTTGTT
ACTGTTGTTTGTATTCTCGCGGCTAAACTCGCTTTTGATGCTTGGTTTTAA

Upstream 100 bases:

>100_bases
TGCTTTGCCTCCCTTTAAAAGGGTAATCGAGTAAATATTTATTGCAATTAAACATCGTATATTGCGATTCTAATTCTGCC
TACAACTAATAAGAGCTTAT

Downstream 100 bases:

>100_bases
ATCGAACTCTTCTTGAATACTAAGGAATAAATGATGGCTAACTATAAAACCATTGAAATCATGTTAGAACAATTGGCAAA
AACAAGCGCAGAAATTGATC

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MEFLEPSTLIILGLVAFVAGFIDAVAGGGGMLTVPALLSIGLPPHIALGTNKLAATFASSTAAITYFKKKLFDPQFWKAS
FIATLLGATCGTLLVNYISTEWLEKGLPLIILGAAIYTIWPNRLISEQNQLPEKTPKFKKQQIIQGLSLGFYDGVAGPGT
GAFWTVSSMALYRLNILLASGLAKAMNFTSNITSLVTFAILGQINWALGLTMGICLMVGAFLGAHSAIRFGSKFIRPVFV
TVVCILAAKLAFDAWF

Sequences:

>Translated_256_residues
MEFLEPSTLIILGLVAFVAGFIDAVAGGGGMLTVPALLSIGLPPHIALGTNKLAATFASSTAAITYFKKKLFDPQFWKAS
FIATLLGATCGTLLVNYISTEWLEKGLPLIILGAAIYTIWPNRLISEQNQLPEKTPKFKKQQIIQGLSLGFYDGVAGPGT
GAFWTVSSMALYRLNILLASGLAKAMNFTSNITSLVTFAILGQINWALGLTMGICLMVGAFLGAHSAIRFGSKFIRPVFV
TVVCILAAKLAFDAWF
>Mature_256_residues
MEFLEPSTLIILGLVAFVAGFIDAVAGGGGMLTVPALLSIGLPPHIALGTNKLAATFASSTAAITYFKKKLFDPQFWKAS
FIATLLGATCGTLLVNYISTEWLEKGLPLIILGAAIYTIWPNRLISEQNQLPEKTPKFKKQQIIQGLSLGFYDGVAGPGT
GAFWTVSSMALYRLNILLASGLAKAMNFTSNITSLVTFAILGQINWALGLTMGICLMVGAFLGAHSAIRFGSKFIRPVFV
TVVCILAAKLAFDAWF

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=251, Percent_Identity=36.2549800796813, Blast_Score=147, Evalue=9e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27345; Mature: 27345

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLEPSTLIILGLVAFVAGFIDAVAGGGGMLTVPALLSIGLPPHIALGTNKLAATFASS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCHHHHHHHHH
TAAITYFKKKLFDPQFWKASFIATLLGATCGTLLVNYISTEWLEKGLPLIILGAAIYTIW
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHH
PNRLISEQNQLPEKTPKFKKQQIIQGLSLGFYDGVAGPGTGAFWTVSSMALYRLNILLAS
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GLAKAMNFTSNITSLVTFAILGQINWALGLTMGICLMVGAFLGAHSAIRFGSKFIRPVFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVVCILAAKLAFDAWF
HHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]