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The map label for this gene is priC [C]

Identifier: 209694678

GI number: 209694678

Start: 1228750

End: 1229310

Strand: Reverse

Name: priC [C]

Synonym: VSAL_I1127

Alternate gene names: 209694678

Gene position: 1229310-1228750 (Counterclockwise)

Preceding gene: 209694679

Following gene: 209694677

Centisome position: 36.97

GC content: 40.29

Gene sequence:

>561_bases
ATGATGGCTAACTATAAAACCATTGAAATCATGTTAGAACAATTGGCAAAAACAAGCGCAGAAATTGATCGTCGCCGTGG
AGAGCAACGCTTACCCCTCTTTGATGAGCGTCTATTTGGTTGCCGAAGCCGCTATTTAATACCCTGTATTAATGAAACAA
AAGCGACACTTCAGTCAATTCAGCGCGAAGAAAAAGCAAATATGTTAACGCCTCAAAGAGCCGAGTATTTAACCCAGATG
CTCCTTGCACAAATAGAAGCAATTCAACGGGAGATTGCAACACAACGTATACGTTCACATGAAGTACGGCCAAAAGGCAG
TAATAAAAAGCCGATTAGCGATATGTACCAAGATCTTGCGCAGCACCAAGAATGGTCTCGTCGCCTTATCCAAATGGTTC
AAGAGCAAGAACAAAATGTAAATAAATGCCATTCCTTCTCACAGCAACAAGAATTACAAAAAGTGCTTCTTACTACAGAA
AAGCGATTACAGCGTTGTAAAACCGCGATGATTCGTTTAGAGCAACAAATTACCTACAGAGAACAAAATGACCAATCTTA
A

Upstream 100 bases:

>100_bases
CATTCGCCCTGTTTTTGTTACTGTTGTTTGTATTCTCGCGGCTAAACTCGCTTTTGATGCTTGGTTTTAAATCGAACTCT
TCTTGAATACTAAGGAATAA

Downstream 100 bases:

>100_bases
GGCTAATAAAAAAAATACGATTGAAACGTTAATTTCAGAATCTCACGATATAAAATCACCAAGTCCATTAGATAACGCTC
CTGATGAAATAAAGCTTGCC

Product: primosomal replication protein N''

Products: NA

Alternate protein names: Primosomal Replication Protein N; Primosomal Replication Protein N``; Primosomal Replication Protein N\\'

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MMANYKTIEIMLEQLAKTSAEIDRRRGEQRLPLFDERLFGCRSRYLIPCINETKATLQSIQREEKANMLTPQRAEYLTQM
LLAQIEAIQREIATQRIRSHEVRPKGSNKKPISDMYQDLAQHQEWSRRLIQMVQEQEQNVNKCHSFSQQQELQKVLLTTE
KRLQRCKTAMIRLEQQITYREQNDQS

Sequences:

>Translated_186_residues
MMANYKTIEIMLEQLAKTSAEIDRRRGEQRLPLFDERLFGCRSRYLIPCINETKATLQSIQREEKANMLTPQRAEYLTQM
LLAQIEAIQREIATQRIRSHEVRPKGSNKKPISDMYQDLAQHQEWSRRLIQMVQEQEQNVNKCHSFSQQQELQKVLLTTE
KRLQRCKTAMIRLEQQITYREQNDQS
>Mature_186_residues
MMANYKTIEIMLEQLAKTSAEIDRRRGEQRLPLFDERLFGCRSRYLIPCINETKATLQSIQREEKANMLTPQRAEYLTQM
LLAQIEAIQREIATQRIRSHEVRPKGSNKKPISDMYQDLAQHQEWSRRLIQMVQEQEQNVNKCHSFSQQQELQKVLLTTE
KRLQRCKTAMIRLEQQITYREQNDQS

Specific function: Pria Recognizes A Specific Hairpin Sequence On Bacteriophage Phi X174 Ssdna. This Structure Is Then Recognized And Bound By Proteins Prib And Pric. Formation Of The Primosome Proceeds With The Subsequent Actions Of Dnab, Dnac, Dnat And Primase. [C]

COG id: COG3923

COG function: function code L; Primosomal replication protein N''

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786673, Length=145, Percent_Identity=30.3448275862069, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22183; Mature: 22183

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMANYKTIEIMLEQLAKTSAEIDRRRGEQRLPLFDERLFGCRSRYLIPCINETKATLQSI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
QREEKANMLTPQRAEYLTQMLLAQIEAIQREIATQRIRSHEVRPKGSNKKPISDMYQDLA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
QHQEWSRRLIQMVQEQEQNVNKCHSFSQQQELQKVLLTTEKRLQRCKTAMIRLEQQITYR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQNDQS
HCCCCC
>Mature Secondary Structure
MMANYKTIEIMLEQLAKTSAEIDRRRGEQRLPLFDERLFGCRSRYLIPCINETKATLQSI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
QREEKANMLTPQRAEYLTQMLLAQIEAIQREIATQRIRSHEVRPKGSNKKPISDMYQDLA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
QHQEWSRRLIQMVQEQEQNVNKCHSFSQQQELQKVLLTTEKRLQRCKTAMIRLEQQITYR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQNDQS
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA