| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is mtnN [H]
Identifier: 209694615
GI number: 209694615
Start: 1146709
End: 1147524
Strand: Direct
Name: mtnN [H]
Synonym: VSAL_I1055
Alternate gene names: 209694615
Gene position: 1146709-1147524 (Clockwise)
Preceding gene: 209694614
Following gene: 209694619
Centisome position: 34.49
GC content: 39.58
Gene sequence:
>816_bases ATGAAAGGCTTTCGTTGTTGTTTTATTGCTTTAACTATGATGTTTTCATTTTCGGCAAGTGCAATGCCACAACCCATTCT TCTTCAAGGCGCAATGGATATTGAAGTTGAGTATATGGTTGCTCAATTGGAAAATAAAAAAGAAGAGACGATTGGGTCTT GGACTTTTTGGGAAGGAACAATTGACGGCTATCCAGTGGTTGTCTCAAGAACGGAAGTTGGTATTGCTAATGCTTCAGCC TCTACCGTACTTGGGATTGAAAAGTTTTCACCAAGTATGATTGTTAACCAAGGTACATCGGGTGGACATGATCCTGAATT GTATCGAGGTGATATTGTTTTAGCTGTAAAGAGTTTCAATATGGGGGCAAACCGCTCTGAGTTTTCTGAAGCGAGTGCTG GTATTCAACCTGAAAAATGGAAAAATTTTACCGTTACTATGCGTCTTAGAGAAGATAACAAGCTAGTTGAGCATGATGCA TTTTACTCTGAACCAACATTAGTTGATTTTGCTTTCGAGAATGTAAGTCACCCAGGTAAAGGTAAGGTAGTGAAGGGCGT GATTGGAACTGCTGATGAATGGAATCGCGAGGTGGCGAGAATTAACTGGTTGCATAAAACATATCAAACTTCAGCTGAAG AGATGGAAAGTTCTTCTGCTGCGTTAGTTGCTAAGGCTTACAATATTCCGTTTATAGGTATTCGTATTTTGTCAAACACT GACCTACACAATCAAGATTTTGATCCTGAGACCGCAACAGTGAATCAGAAGTACGTGATTGATTTTGTGAAAAAGTGGGT TGCGAGCCAAAAATAA
Upstream 100 bases:
>100_bases CTTTTATAGATAAAAGCAATCGTTTGCTTATGTTGTCTATTCATGTATTATCCGCCGCATATTTTCGTGTAACAATGTAA TTCAAACAGGGTATAAATAT
Downstream 100 bases:
>100_bases ATTTACTTTATATAACGAAAAATCCCCAGCATTTCTGCTAGGGCTTCGAAATTGGTGGAGGGATAGGGATTTGAACCCTA GAACCGCTATTAACGGTTGC
Product: phosphorylase
Products: NA
Alternate protein names: MTA/SAH nucleosidase; MTAN; 5'-methylthioadenosine nucleosidase; MTA nucleosidase; S-adenosylhomocysteine nucleosidase; AdoHcy nucleosidase; SAH nucleosidase; SRH nucleosidase [H]
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKGFRCCFIALTMMFSFSASAMPQPILLQGAMDIEVEYMVAQLENKKEETIGSWTFWEGTIDGYPVVVSRTEVGIANASA STVLGIEKFSPSMIVNQGTSGGHDPELYRGDIVLAVKSFNMGANRSEFSEASAGIQPEKWKNFTVTMRLREDNKLVEHDA FYSEPTLVDFAFENVSHPGKGKVVKGVIGTADEWNREVARINWLHKTYQTSAEEMESSSAALVAKAYNIPFIGIRILSNT DLHNQDFDPETATVNQKYVIDFVKKWVASQK
Sequences:
>Translated_271_residues MKGFRCCFIALTMMFSFSASAMPQPILLQGAMDIEVEYMVAQLENKKEETIGSWTFWEGTIDGYPVVVSRTEVGIANASA STVLGIEKFSPSMIVNQGTSGGHDPELYRGDIVLAVKSFNMGANRSEFSEASAGIQPEKWKNFTVTMRLREDNKLVEHDA FYSEPTLVDFAFENVSHPGKGKVVKGVIGTADEWNREVARINWLHKTYQTSAEEMESSSAALVAKAYNIPFIGIRILSNT DLHNQDFDPETATVNQKYVIDFVKKWVASQK >Mature_271_residues MKGFRCCFIALTMMFSFSASAMPQPILLQGAMDIEVEYMVAQLENKKEETIGSWTFWEGTIDGYPVVVSRTEVGIANASA STVLGIEKFSPSMIVNQGTSGGHDPELYRGDIVLAVKSFNMGANRSEFSEASAGIQPEKWKNFTVTMRLREDNKLVEHDA FYSEPTLVDFAFENVSHPGKGKVVKGVIGTADEWNREVARINWLHKTYQTSAEEMESSSAALVAKAYNIPFIGIRILSNT DLHNQDFDPETATVNQKYVIDFVKKWVASQK
Specific function: Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/UDP phosphorylase family. MtnN subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786354, Length=212, Percent_Identity=25.4716981132075, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010049 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.9 [H]
Molecular weight: Translated: 30201; Mature: 30201
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGFRCCFIALTMMFSFSASAMPQPILLQGAMDIEVEYMVAQLENKKEETIGSWTFWEGT CCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEHHHHHHHHHCCHHHHCCCEEEECCC IDGYPVVVSRTEVGIANASASTVLGIEKFSPSMIVNQGTSGGHDPELYRGDIVLAVKSFN CCCEEEEEEECEECEECCCCCEEEEEECCCCCEEEECCCCCCCCCCEEECCEEEEEEECC MGANRSEFSEASAGIQPEKWKNFTVTMRLREDNKLVEHDAFYSEPTLVDFAFENVSHPGK CCCCHHHHHHHHCCCCCHHCCCEEEEEEECCCCCEECCCCCCCCCCEEEEEHHCCCCCCC GKVVKGVIGTADEWNREVARINWLHKTYQTSAEEMESSSAALVAKAYNIPFIGIRILSNT CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECC DLHNQDFDPETATVNQKYVIDFVKKWVASQK CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKGFRCCFIALTMMFSFSASAMPQPILLQGAMDIEVEYMVAQLENKKEETIGSWTFWEGT CCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEHHHHHHHHHCCHHHHCCCEEEECCC IDGYPVVVSRTEVGIANASASTVLGIEKFSPSMIVNQGTSGGHDPELYRGDIVLAVKSFN CCCEEEEEEECEECEECCCCCEEEEEECCCCCEEEECCCCCCCCCCEEECCEEEEEEECC MGANRSEFSEASAGIQPEKWKNFTVTMRLREDNKLVEHDAFYSEPTLVDFAFENVSHPGK CCCCHHHHHHHHCCCCCHHCCCEEEEEEECCCCCEECCCCCCCCCCEEEEEHHCCCCCCC GKVVKGVIGTADEWNREVARINWLHKTYQTSAEEMESSSAALVAKAYNIPFIGIRILSNT CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECC DLHNQDFDPETATVNQKYVIDFVKKWVASQK CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA