Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694613

Identifier: 209694613

GI number: 209694613

Start: 1145099

End: 1145938

Strand: Direct

Name: 209694613

Synonym: VSAL_I1053

Alternate gene names: NA

Gene position: 1145099-1145938 (Clockwise)

Preceding gene: 209694612

Following gene: 209694614

Centisome position: 34.44

GC content: 38.45

Gene sequence:

>840_bases
ATGAAATTAGAAGCGATCGATTACACTGCTGAAAATGCAGCAGAGCTGTTTGTTAAGTCATTAAGAGAAACGGGATTTGG
TGTACTGAAAAATCATCCAATTCAACAAGATCTTGTACAAAGTATTTACGATAATTGGTATTCATTCTTTAATAGTGAAG
AGAAAGAAAATTTTCAGTTTAATGTAGACACGCAAGACGGTTTTTTCCCAGCCTCAGTGTCTGAAGTTGCGAAAGGTCAT
ACAAAAAAAGACATTAAAGAATACTTCCATTACTACCCTACAGGGCAATGTCCTGCTGAATTGAAAGCACAAATTCAAGA
GTATTATGATAATGCGAATACTTTAGCATCAGAATTGCTTTCTTGGGTTGAAGCGCACTCACCATCAGACGTGTCTGAGT
TATTCTCTCAATCGCTTTCTAGCATGGTTGAGCAGAGTGATAAGACCTTACTTCGTATTCTTCATTACCCACCGTTAGAA
GGCGATGAGGAGCTTGGTGCTATTCGTGCTGGTGCACATGAAGATATCAATTTATTAACGATACTTCCTGCCGCTAATGA
ACCAGGTTTGCAAGTTAAGACAAAAGAAAACGAATGGTTAGATGTGCCGTGTGATTTTGGTAATCTAATTATTAATATTG
GCGATATGCTGCAAGAAGCGTCAGAAGGGTATTATCCATCAACAACACATCGCGTTGTGAACCCTGAAGGTGCTGACAAA
ACAAAATCTCGTATTTCATTGCCTTTGTTTTTACACCCTAAACCAGATGTGGTTTTATCTGAACGCCACACCGCAAATAG
TTATTTGATGGAACGTTTACGTGAGTTGGGCGTAATTTAA

Upstream 100 bases:

>100_bases
TATTAGCGCTTGAGGCCATCTACGCATCTTAATACAATTTAACAATACATTATAAGAAACAAATAATAGAAACCAGTCAG
CCAACAATAAGATAATTATT

Downstream 100 bases:

>100_bases
TTGCCCTAGTAGTTTATAAAAAGCGAGTAGCCTTGGTTACTCGCTTTTTTTGTATCTGTGTGACCTAGATTGTCTATTGA
TGTTTACTCTGTGGAGAGGC

Product: 2OG-Fe(II) oxygenase

Products: NA

Alternate protein names: Oxidoreductase; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Isopenicillin N Synthase; Iron/Ascorbate Family Oxidoreductase; 2OG-Fe(II) Oxygenase Superfamily Protein; Flavonol Synthase/Dioxygenase; 2og-Fe(Ii) Oxygenase; Oxidoreductase 2OG-Fe(II) Oxygenase Family Protein; Oxidoreductase Iron/Ascorbate Family Protein; Iron/Ascorbate Oxidoreductase; Iron/Ascorbate Oxidoreductase Family Protein; 1-Aminocyclopropane-1-Carboxylate Oxidase; Oxygenase; Isopenicillin N Synthase And Related Dioxygenases; Oxidoreductase 2og-Fe(Ii) Oxygenase Family; Iron/Ascorbate-Dependent Oxidoreductase Family Protein; Oxidoreductase Iron/Ascorbate Family; Fe-Containing Oxidoreductase; Isopenicillin-N Synthase; 2-Oxobutyrate Oxidase; Flavonol Synthase/Flavanone 3-Hydroxylase; 2-Oxoglutarate And Fe(Ii)-Dependent Oxygenase; Dioxygenase; Oxygenase/Oxidoreductase

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKLEAIDYTAENAAELFVKSLRETGFGVLKNHPIQQDLVQSIYDNWYSFFNSEEKENFQFNVDTQDGFFPASVSEVAKGH
TKKDIKEYFHYYPTGQCPAELKAQIQEYYDNANTLASELLSWVEAHSPSDVSELFSQSLSSMVEQSDKTLLRILHYPPLE
GDEELGAIRAGAHEDINLLTILPAANEPGLQVKTKENEWLDVPCDFGNLIINIGDMLQEASEGYYPSTTHRVVNPEGADK
TKSRISLPLFLHPKPDVVLSERHTANSYLMERLRELGVI

Sequences:

>Translated_279_residues
MKLEAIDYTAENAAELFVKSLRETGFGVLKNHPIQQDLVQSIYDNWYSFFNSEEKENFQFNVDTQDGFFPASVSEVAKGH
TKKDIKEYFHYYPTGQCPAELKAQIQEYYDNANTLASELLSWVEAHSPSDVSELFSQSLSSMVEQSDKTLLRILHYPPLE
GDEELGAIRAGAHEDINLLTILPAANEPGLQVKTKENEWLDVPCDFGNLIINIGDMLQEASEGYYPSTTHRVVNPEGADK
TKSRISLPLFLHPKPDVVLSERHTANSYLMERLRELGVI
>Mature_279_residues
MKLEAIDYTAENAAELFVKSLRETGFGVLKNHPIQQDLVQSIYDNWYSFFNSEEKENFQFNVDTQDGFFPASVSEVAKGH
TKKDIKEYFHYYPTGQCPAELKAQIQEYYDNANTLASELLSWVEAHSPSDVSELFSQSLSSMVEQSDKTLLRILHYPPLE
GDEELGAIRAGAHEDINLLTILPAANEPGLQVKTKENEWLDVPCDFGNLIINIGDMLQEASEGYYPSTTHRVVNPEGADK
TKSRISLPLFLHPKPDVVLSERHTANSYLMERLRELGVI

Specific function: Unknown

COG id: COG3491

COG function: function code R; Isopenicillin N synthase and related dioxygenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI28572124, Length=259, Percent_Identity=27.7992277992278, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI85816264, Length=275, Percent_Identity=26.1818181818182, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31546; Mature: 31546

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLEAIDYTAENAAELFVKSLRETGFGVLKNHPIQQDLVQSIYDNWYSFFNSEEKENFQF
CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEE
NVDTQDGFFPASVSEVAKGHTKKDIKEYFHYYPTGQCPAELKAQIQEYYDNANTLASELL
EECCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
SWVEAHSPSDVSELFSQSLSSMVEQSDKTLLRILHYPPLEGDEELGAIRAGAHEDINLLT
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEE
ILPAANEPGLQVKTKENEWLDVPCDFGNLIINIGDMLQEASEGYYPSTTHRVVNPEGADK
EEECCCCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCH
TKSRISLPLFLHPKPDVVLSERHTANSYLMERLRELGVI
HHHHCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLEAIDYTAENAAELFVKSLRETGFGVLKNHPIQQDLVQSIYDNWYSFFNSEEKENFQF
CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEE
NVDTQDGFFPASVSEVAKGHTKKDIKEYFHYYPTGQCPAELKAQIQEYYDNANTLASELL
EECCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
SWVEAHSPSDVSELFSQSLSSMVEQSDKTLLRILHYPPLEGDEELGAIRAGAHEDINLLT
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEE
ILPAANEPGLQVKTKENEWLDVPCDFGNLIINIGDMLQEASEGYYPSTTHRVVNPEGADK
EEECCCCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCH
TKSRISLPLFLHPKPDVVLSERHTANSYLMERLRELGVI
HHHHCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA