Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is yeiW [C]

Identifier: 209694567

GI number: 209694567

Start: 1109644

End: 1109895

Strand: Reverse

Name: yeiW [C]

Synonym: VSAL_I1006

Alternate gene names: 209694567

Gene position: 1109895-1109644 (Counterclockwise)

Preceding gene: 209694569

Following gene: 209694564

Centisome position: 33.38

GC content: 42.46

Gene sequence:

>252_bases
ATGGAATGTAGATTATATTGCGGTGCCTGCTGTATTGCCCCAAGTATTACTTCATTTATTCCTGGAATGCCAAATGGGAA
ACCTGCGGGTGTACGTTGTGTTCAATTGAACGATGAGAATCTGTGTAAGCTATTTGGTCAGGCTGACCGTCCAAAGGTAT
GTCACCAATTTAAAGCTTGCCCTGACGTGTGTGGTTCAACCTCAGAACAAGCATTGCAAACGATCACTGAATTAGAATCA
ATGACGCTTTAA

Upstream 100 bases:

>100_bases
GTGGTTTACAGATCACAAGATAAGAATCCAGACTAACTTTGACCTGAAAGATGAAGAGTGGTATTTTGCGCATCCTTTAA
TTGATGCAATGAGATGATGT

Downstream 100 bases:

>100_bases
TTACGATAATACGCGAATAACGTTTTGTACTTGCTCTGAGACTTCAGTACCGTGGGCTGTTAAATAACCACCATCATTTT
GTGTTACCAATCCTTTCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MECRLYCGACCIAPSITSFIPGMPNGKPAGVRCVQLNDENLCKLFGQADRPKVCHQFKACPDVCGSTSEQALQTITELES
MTL

Sequences:

>Translated_83_residues
MECRLYCGACCIAPSITSFIPGMPNGKPAGVRCVQLNDENLCKLFGQADRPKVCHQFKACPDVCGSTSEQALQTITELES
MTL
>Mature_83_residues
MECRLYCGACCIAPSITSFIPGMPNGKPAGVRCVQLNDENLCKLFGQADRPKVCHQFKACPDVCGSTSEQALQTITELES
MTL

Specific function: Unknown

COG id: COG0727

COG function: function code R; Predicted Fe-S-cluster oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0153 family [H]

Homologues:

Organism=Escherichia coli, GI87082060, Length=82, Percent_Identity=51.219512195122, Blast_Score=92, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 8971; Mature: 8971

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
14.5 %Cys+Met (Translated Protein)
10.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
14.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECRLYCGACCIAPSITSFIPGMPNGKPAGVRCVQLNDENLCKLFGQADRPKVCHQFKAC
CCCCEECCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCCHHHHHHHCC
PDVCGSTSEQALQTITELESMTL
HHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MECRLYCGACCIAPSITSFIPGMPNGKPAGVRCVQLNDENLCKLFGQADRPKVCHQFKAC
CCCCEECCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCCHHHHHHHCC
PDVCGSTSEQALQTITELESMTL
HHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]