| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is yeiW [C]
Identifier: 209694567
GI number: 209694567
Start: 1109644
End: 1109895
Strand: Reverse
Name: yeiW [C]
Synonym: VSAL_I1006
Alternate gene names: 209694567
Gene position: 1109895-1109644 (Counterclockwise)
Preceding gene: 209694569
Following gene: 209694564
Centisome position: 33.38
GC content: 42.46
Gene sequence:
>252_bases ATGGAATGTAGATTATATTGCGGTGCCTGCTGTATTGCCCCAAGTATTACTTCATTTATTCCTGGAATGCCAAATGGGAA ACCTGCGGGTGTACGTTGTGTTCAATTGAACGATGAGAATCTGTGTAAGCTATTTGGTCAGGCTGACCGTCCAAAGGTAT GTCACCAATTTAAAGCTTGCCCTGACGTGTGTGGTTCAACCTCAGAACAAGCATTGCAAACGATCACTGAATTAGAATCA ATGACGCTTTAA
Upstream 100 bases:
>100_bases GTGGTTTACAGATCACAAGATAAGAATCCAGACTAACTTTGACCTGAAAGATGAAGAGTGGTATTTTGCGCATCCTTTAA TTGATGCAATGAGATGATGT
Downstream 100 bases:
>100_bases TTACGATAATACGCGAATAACGTTTTGTACTTGCTCTGAGACTTCAGTACCGTGGGCTGTTAAATAACCACCATCATTTT GTGTTACCAATCCTTTCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MECRLYCGACCIAPSITSFIPGMPNGKPAGVRCVQLNDENLCKLFGQADRPKVCHQFKACPDVCGSTSEQALQTITELES MTL
Sequences:
>Translated_83_residues MECRLYCGACCIAPSITSFIPGMPNGKPAGVRCVQLNDENLCKLFGQADRPKVCHQFKACPDVCGSTSEQALQTITELES MTL >Mature_83_residues MECRLYCGACCIAPSITSFIPGMPNGKPAGVRCVQLNDENLCKLFGQADRPKVCHQFKACPDVCGSTSEQALQTITELES MTL
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0153 family [H]
Homologues:
Organism=Escherichia coli, GI87082060, Length=82, Percent_Identity=51.219512195122, Blast_Score=92, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005358 [H]
Pfam domain/function: PF03692 UPF0153 [H]
EC number: NA
Molecular weight: Translated: 8971; Mature: 8971
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 14.5 %Cys+Met (Translated Protein) 10.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 14.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECRLYCGACCIAPSITSFIPGMPNGKPAGVRCVQLNDENLCKLFGQADRPKVCHQFKAC CCCCEECCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCCHHHHHHHCC PDVCGSTSEQALQTITELESMTL HHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MECRLYCGACCIAPSITSFIPGMPNGKPAGVRCVQLNDENLCKLFGQADRPKVCHQFKAC CCCCEECCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCCHHHHHHHCC PDVCGSTSEQALQTITELESMTL HHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]