BacMap

Definition	Ureaplasma urealyticum serovar 10 str. ATCC 33699 chromosome, complete genome.
Accession	NC_011374
Length	874,478

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The map label for this gene is dnaJ [H]

Identifier: 209554560

GI number: 209554560

Start: 500964

End: 502091

Strand: Reverse

Name: dnaJ [H]

Synonym: UUR10_0451

Alternate gene names: 209554560

Gene position: 502091-500964 (Counterclockwise)

Preceding gene: 209553996

Following gene: 209554195

Centisome position: 57.42

GC content: 31.21

Gene sequence:

>1128_bases
ATGGCAAAACGTGATTACTATGAAGTTTTAGGTGTTAGTAAATCAGCAAGCCCTGAAGAAATTAAAACTGCGTTTCGTAA
ATTAGCAAAAGAGCACCATCCAGATCGAAACAAATCTGCTGATGATACTGTTTTTAAAGAAATTAATGAAGCTTATGAGG
TGTTATCAGATCCTAAAAAACGTGCTCAATACGACCAATTTGGTCATGATGGACCGCAAGGGTTTGCTGGAGCTGGTGGC
TTTTCTGGGTTTAGTGATGGATTTGGCGGTGTTGATTTTGACATCAACGACATTTTTGGAAGTTTTTTTAAAAATGGTGC
TAGCTCACGTAGTTCATCAAGCCAATATGAAACGTATGACATTCATTTACGTTTACATTTAGAATTTATAGAAGCTATTA
AGGGTGTTTCTAAAAATATTAGTTATGATCGTAAAATCACATGTAACAAGTGTCAAGGAACAGGAGCAAAAGATCCTAAA
GATGTTAAAACTTGTACAAAATGTCATGGTCGTGGAACTACAATTGAAAACGTTCATTCATTATTTGGAACAATTCAACA
AGAAGTTGAATGTCATGAATGTGAGGGAACTGGAAAAGTTGCTAATAGCAAATGCGAACAATGTTATGGCAAAAAAGTTA
TTAATGAACGCGTTAATTTAACAGTTGAAATTCCTGCTGGTACACAAGATAATGAAAAATTAGTAGTAAGTAAAAAAGGT
AATATCATAAATAACCAAGAATTTGATCTTTATTTACATATTAGCGTTAAACCATCAAAATATTTTGCATTCGATGGTTT
AGATATTTACTCAGAAACTTATGTTGATCCTATTAAAGCAATTGTTGGTGGTGTAATTGAAGTAGTAACAACAAGTGGAA
TTAAAACTATTGAAATTCCACCAAATACTCCAGAAGGTAAAAAATTTAGAATTAGTGGCGCTGGAATTGTTAATAAAAAA
CCAAATATTTTTAGCAAAAAAAATGGAGATTTTTACACAACAATTCGTTATGCAAAACCACTTGAATTAACTAAAGAAGA
AATTGCTTATTTAAAAAATATTAGTGCTCGTACCAACCAAAGTGTTGAGTATTATAAAAATAAATTATTAAAAGAGGTTA
ATAAATAA

Upstream 100 bases:

>100_bases
ATTATTTTAGCAATCTCAATATCTGATTGCTAATTTTTAGCATTTTAGGTTATAATATATACTATTGTAAATATGAGATT
TTAAAGGAAGTGGTTTAAAT

Downstream 100 bases:

>100_bases
TGAGTAAAAATAATGAAAATATCAAACACCAAAATGAAGGCAAACTTCATGACCAAGTTGATAAAAAAGAAACTAAAAAT
CATGCTAAACAAGAATTTAA

Product: chaperone protein DnaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MAKRDYYEVLGVSKSASPEEIKTAFRKLAKEHHPDRNKSADDTVFKEINEAYEVLSDPKKRAQYDQFGHDGPQGFAGAGG
FSGFSDGFGGVDFDINDIFGSFFKNGASSRSSSSQYETYDIHLRLHLEFIEAIKGVSKNISYDRKITCNKCQGTGAKDPK
DVKTCTKCHGRGTTIENVHSLFGTIQQEVECHECEGTGKVANSKCEQCYGKKVINERVNLTVEIPAGTQDNEKLVVSKKG
NIINNQEFDLYLHISVKPSKYFAFDGLDIYSETYVDPIKAIVGGVIEVVTTSGIKTIEIPPNTPEGKKFRISGAGIVNKK
PNIFSKKNGDFYTTIRYAKPLELTKEEIAYLKNISARTNQSVEYYKNKLLKEVNK

Sequences:

>Translated_375_residues
MAKRDYYEVLGVSKSASPEEIKTAFRKLAKEHHPDRNKSADDTVFKEINEAYEVLSDPKKRAQYDQFGHDGPQGFAGAGG
FSGFSDGFGGVDFDINDIFGSFFKNGASSRSSSSQYETYDIHLRLHLEFIEAIKGVSKNISYDRKITCNKCQGTGAKDPK
DVKTCTKCHGRGTTIENVHSLFGTIQQEVECHECEGTGKVANSKCEQCYGKKVINERVNLTVEIPAGTQDNEKLVVSKKG
NIINNQEFDLYLHISVKPSKYFAFDGLDIYSETYVDPIKAIVGGVIEVVTTSGIKTIEIPPNTPEGKKFRISGAGIVNKK
PNIFSKKNGDFYTTIRYAKPLELTKEEIAYLKNISARTNQSVEYYKNKLLKEVNK
>Mature_374_residues
AKRDYYEVLGVSKSASPEEIKTAFRKLAKEHHPDRNKSADDTVFKEINEAYEVLSDPKKRAQYDQFGHDGPQGFAGAGGF
SGFSDGFGGVDFDINDIFGSFFKNGASSRSSSSQYETYDIHLRLHLEFIEAIKGVSKNISYDRKITCNKCQGTGAKDPKD
VKTCTKCHGRGTTIENVHSLFGTIQQEVECHECEGTGKVANSKCEQCYGKKVINERVNLTVEIPAGTQDNEKLVVSKKGN
IINNQEFDLYLHISVKPSKYFAFDGLDIYSETYVDPIKAIVGGVIEVVTTSGIKTIEIPPNTPEGKKFRISGAGIVNKKP
NIFSKKNGDFYTTIRYAKPLELTKEEIAYLKNISARTNQSVEYYKNKLLKEVNK

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI205360840, Length=356, Percent_Identity=32.5842696629214, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI205360838, Length=356, Percent_Identity=32.8651685393258, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI194328758, Length=282, Percent_Identity=34.0425531914894, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI194328760, Length=282, Percent_Identity=34.0425531914894, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI5031741, Length=293, Percent_Identity=31.0580204778157, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI4504511, Length=283, Percent_Identity=31.095406360424, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI194328762, Length=245, Percent_Identity=30.6122448979592, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI194306642, Length=107, Percent_Identity=47.6635514018692, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI194306640, Length=107, Percent_Identity=47.6635514018692, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI7706495, Length=340, Percent_Identity=27.9411764705882, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI5453690, Length=318, Percent_Identity=27.3584905660377, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI201862518, Length=373, Percent_Identity=26.8096514745308, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI9558755, Length=104, Percent_Identity=46.1538461538462, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI6631085, Length=69, Percent_Identity=60.8695652173913, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI201862587, Length=69, Percent_Identity=55.0724637681159, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI56549115, Length=69, Percent_Identity=55.0724637681159, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI23503241, Length=104, Percent_Identity=50, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI47777312, Length=104, Percent_Identity=50, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=59.0909090909091, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI39204547, Length=185, Percent_Identity=31.3513513513514, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=59.0909090909091, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI72534740, Length=112, Percent_Identity=42.8571428571429, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI21553335, Length=73, Percent_Identity=52.0547945205479, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI22749377, Length=68, Percent_Identity=52.9411764705882, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI56687498, Length=184, Percent_Identity=33.1521739130435, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI27151736, Length=110, Percent_Identity=42.7272727272727, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI88501736, Length=110, Percent_Identity=42.7272727272727, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI221219056, Length=104, Percent_Identity=43.2692307692308, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI262206280, Length=106, Percent_Identity=42.4528301886792, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI217035105, Length=72, Percent_Identity=45.8333333333333, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI29126218, Length=69, Percent_Identity=52.1739130434783, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI24308127, Length=70, Percent_Identity=48.5714285714286, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1786197, Length=363, Percent_Identity=34.1597796143251, Blast_Score=195, Evalue=3e-51,
Organism=Escherichia coli, GI1787235, Length=363, Percent_Identity=26.7217630853994, Blast_Score=120, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17553096, Length=355, Percent_Identity=30.4225352112676, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17553098, Length=355, Percent_Identity=30.4225352112676, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17507263, Length=292, Percent_Identity=32.5342465753425, Blast_Score=117, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI17534355, Length=320, Percent_Identity=29.0625, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115532476, Length=67, Percent_Identity=55.2238805970149, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI115532378, Length=97, Percent_Identity=46.3917525773196, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17554644, Length=106, Percent_Identity=43.3962264150943, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17538236, Length=114, Percent_Identity=38.5964912280702, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17568643, Length=68, Percent_Identity=51.4705882352941, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17543226, Length=63, Percent_Identity=49.2063492063492, Blast_Score=65, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6324265, Length=303, Percent_Identity=35.973597359736, Blast_Score=153, Evalue=5e-38,
Organism=Saccharomyces cerevisiae, GI6323870, Length=297, Percent_Identity=29.96632996633, Blast_Score=119, Evalue=7e-28,
Organism=Saccharomyces cerevisiae, GI6323119, Length=253, Percent_Identity=32.0158102766798, Blast_Score=111, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6321094, Length=367, Percent_Identity=30.7901907356948, Blast_Score=105, Evalue=9e-24,
Organism=Saccharomyces cerevisiae, GI6324252, Length=298, Percent_Identity=26.510067114094, Blast_Score=87, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6320888, Length=103, Percent_Identity=42.7184466019417, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6324321, Length=62, Percent_Identity=51.6129032258064, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6322194, Length=105, Percent_Identity=43.8095238095238, Blast_Score=67, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6323813, Length=132, Percent_Identity=36.3636363636364, Blast_Score=67, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6322388, Length=104, Percent_Identity=39.4230769230769, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324828, Length=89, Percent_Identity=39.3258426966292, Blast_Score=63, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24646562, Length=284, Percent_Identity=30.2816901408451, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24646560, Length=284, Percent_Identity=30.2816901408451, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24646558, Length=284, Percent_Identity=30.2816901408451, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24646556, Length=284, Percent_Identity=30.2816901408451, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI21357547, Length=284, Percent_Identity=30.2816901408451, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI45549272, Length=382, Percent_Identity=28.2722513089005, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI45552813, Length=382, Percent_Identity=27.7486910994764, Blast_Score=125, Evalue=6e-29,
Organism=Drosophila melanogaster, GI45552811, Length=382, Percent_Identity=26.7015706806283, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI20129487, Length=260, Percent_Identity=33.8461538461538, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24584014, Length=260, Percent_Identity=33.8461538461538, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI28574949, Length=326, Percent_Identity=26.6871165644172, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI19920464, Length=363, Percent_Identity=28.3746556473829, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI85726398, Length=383, Percent_Identity=29.242819843342, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24658562, Length=338, Percent_Identity=28.4023668639053, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24658555, Length=338, Percent_Identity=28.4023668639053, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24654066, Length=101, Percent_Identity=47.5247524752475, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24654070, Length=101, Percent_Identity=47.5247524752475, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24654068, Length=101, Percent_Identity=47.5247524752475, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24654072, Length=101, Percent_Identity=47.5247524752475, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24584630, Length=123, Percent_Identity=39.0243902439024, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI17648033, Length=123, Percent_Identity=39.0243902439024, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI18858081, Length=85, Percent_Identity=44.7058823529412, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=53.125, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21358273, Length=116, Percent_Identity=38.7931034482759, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21355911, Length=96, Percent_Identity=42.7083333333333, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24641698, Length=62, Percent_Identity=48.3870967741936, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24641696, Length=62, Percent_Identity=48.3870967741936, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 41787; Mature: 41656

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRDYYEVLGVSKSASPEEIKTAFRKLAKEHHPDRNKSADDTVFKEINEAYEVLSDPKK
CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHH
RAQYDQFGHDGPQGFAGAGGFSGFSDGFGGVDFDINDIFGSFFKNGASSRSSSSQYETYD
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEE
IHLRLHLEFIEAIKGVSKNISYDRKITCNKCQGTGAKDPKDVKTCTKCHGRGTTIENVHS
EEEEEEHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH
LFGTIQQEVECHECEGTGKVANSKCEQCYGKKVINERVNLTVEIPAGTQDNEKLVVSKKG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECC
NIINNQEFDLYLHISVKPSKYFAFDGLDIYSETYVDPIKAIVGGVIEVVTTSGIKTIEIP
CCCCCCCEEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
PNTPEGKKFRISGAGIVNKKPNIFSKKNGDFYTTIRYAKPLELTKEEIAYLKNISARTNQ
CCCCCCCEEEEECCEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCHHCCC
SVEYYKNKLLKEVNK
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKRDYYEVLGVSKSASPEEIKTAFRKLAKEHHPDRNKSADDTVFKEINEAYEVLSDPKK
CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHH
RAQYDQFGHDGPQGFAGAGGFSGFSDGFGGVDFDINDIFGSFFKNGASSRSSSSQYETYD
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEE
IHLRLHLEFIEAIKGVSKNISYDRKITCNKCQGTGAKDPKDVKTCTKCHGRGTTIENVHS
EEEEEEHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH
LFGTIQQEVECHECEGTGKVANSKCEQCYGKKVINERVNLTVEIPAGTQDNEKLVVSKKG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECC
NIINNQEFDLYLHISVKPSKYFAFDGLDIYSETYVDPIKAIVGGVIEVVTTSGIKTIEIP
CCCCCCCEEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
PNTPEGKKFRISGAGIVNKKPNIFSKKNGDFYTTIRYAKPLELTKEEIAYLKNISARTNQ
CCCCCCCEEEEECCEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCHHCCC
SVEYYKNKLLKEVNK
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11048724 [H]