| Definition | Ureaplasma urealyticum serovar 10 str. ATCC 33699 chromosome, complete genome. |
|---|---|
| Accession | NC_011374 |
| Length | 874,478 |
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The map label for this gene is cshB [H]
Identifier: 209554212
GI number: 209554212
Start: 850480
End: 851817
Strand: Reverse
Name: cshB [H]
Synonym: UUR10_0686
Alternate gene names: 209554212
Gene position: 851817-850480 (Counterclockwise)
Preceding gene: 209554176
Following gene: 209554019
Centisome position: 97.41
GC content: 25.71
Gene sequence:
>1338_bases ATGAAATTTAGTGATAATAATTATCAAAAATGAATCCTTGATTCTTTAGCTGATCAAAAGATTTTTGAACCAACTCCTAT ACAAACAAAAGCTATACCATTAATTAGTAAAAAAGAAAATGTTATTGGTATTGCGCCAACAGGAACAGGAAAGACTTTAG CTTTTGCTTTGCCAATTTTAAATAATTTAGATTTATCGCAAAAACTACAAGCTATTATCATTGCACCAACACGCGAATTA GTTCGTCAAATTTTTAGTAAAATTGCTCTTTTTAAAAAACAACAACCCCTTTTACAAATTAAAATGTTAATTGGTGGTGA AAGTATTGACAAACAAATTAACTCACAATTAAATAAAGCTCATATTATTGTTGCAACTCCAACACGTTTAAAACAAGTTT TATCATCGCAAGTACTTGACTTACGAAGTATTAATACTCTTGTTTTTGATGAAGCAGATATGCTAATGGATTTGGGTTTT GTTAATGAACTAGATTTTATTAATTCACAATTTATCAATACTAATGTTCAAAAAATTAGTTTTAGTGCAACATTACACGA AATGTTATCTATTCAATTAAAGAAATATTTTAAAAACACTAAAATTATTAATATTAGCAATTCAATTTATGAAAATGAAA AAATAACACATTATGTTGTTCATAATCATGATAAATGACATTCGTTATCAACAATTATGAAAACAATTAAACCTTATTTA TGTATTATTTTTGCTAATACAAAAAAAGAAGTTGAATTAATTTATAAGTATTTAGTTGAACAAAATAAAAATGTTTGTAT TTTACATGGTTCACTACTTCAACGTGAACGAAAAAATAATTATCGTGATATTAAAAATAATAAATTTCAATATGTTGTTG CCTCAGATATTGCAAGTCGTGGTTTAGATATTGATGGTGCAAGCCACATCATTAACTGAAATTTACCTTCTGAAAATGAA TGATATATTCATCGTGCAGGCCGAAGTGGTCGTGGTAAATATAGTGGTGAATCATATGTGCTTTATGATCCAAAAGATCA TGATAAATTATTAAATTTATCAAAAAAAGGGATTGTTTTCCATCATAAATTTATTAAACAAAACGAATTAGTTGATAAAC AATTTGTATTTAAGAAAAAGAATCAATTCCATGATTTAGAAACCCAAAATGAAATTAAAAAAGTAATTGCAACAGCAAGC ACTAAAGTTAAACCAGGTTATAAAAAGAAAATTAAAGAAGCGATTCAAAAAATCAATCAAAAAAACAAGCGTTCTCATAT TGAAAAGAAAATGAATGCTCATCGAATTCGTGGATATAAATTAAAAAATAGTCAATAA
Upstream 100 bases:
>100_bases ACTTCTGAAATTGGTAATGAAAAAGAAGAAAAGCCAAAAAAACAATTAGAATCAAAAATAGAAAATAAAGTGATTAATAC TAATTCACAAGGTGTGATGA
Downstream 100 bases:
>100_bases ATTTAAAAAAAATAATATAATAACAATGCATATAAGGTAAAAAAGCTCGTAAGACTTATATGCATCGAATTCGTTTAAAT TACATAAAAACATTTCGATA
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MKFSDNNYQKWILDSLADQKIFEPTPIQTKAIPLISKKENVIGIAPTGTGKTLAFALPILNNLDLSQKLQAIIIAPTREL VRQIFSKIALFKKQQPLLQIKMLIGGESIDKQINSQLNKAHIIVATPTRLKQVLSSQVLDLRSINTLVFDEADMLMDLGF VNELDFINSQFINTNVQKISFSATLHEMLSIQLKKYFKNTKIINISNSIYENEKITHYVVHNHDKWHSLSTIMKTIKPYL CIIFANTKKEVELIYKYLVEQNKNVCILHGSLLQRERKNNYRDIKNNKFQYVVASDIASRGLDIDGASHIINWNLPSENE WYIHRAGRSGRGKYSGESYVLYDPKDHDKLLNLSKKGIVFHHKFIKQNELVDKQFVFKKKNQFHDLETQNEIKKVIATAS TKVKPGYKKKIKEAIQKINQKNKRSHIEKKMNAHRIRGYKLKNSQ
Sequences:
>Translated_445_residues MKFSDNNYQK*ILDSLADQKIFEPTPIQTKAIPLISKKENVIGIAPTGTGKTLAFALPILNNLDLSQKLQAIIIAPTREL VRQIFSKIALFKKQQPLLQIKMLIGGESIDKQINSQLNKAHIIVATPTRLKQVLSSQVLDLRSINTLVFDEADMLMDLGF VNELDFINSQFINTNVQKISFSATLHEMLSIQLKKYFKNTKIINISNSIYENEKITHYVVHNHDK*HSLSTIMKTIKPYL CIIFANTKKEVELIYKYLVEQNKNVCILHGSLLQRERKNNYRDIKNNKFQYVVASDIASRGLDIDGASHIIN*NLPSENE *YIHRAGRSGRGKYSGESYVLYDPKDHDKLLNLSKKGIVFHHKFIKQNELVDKQFVFKKKNQFHDLETQNEIKKVIATAS TKVKPGYKKKIKEAIQKINQKNKRSHIEKKMNAHRIRGYKLKNSQ >Mature_445_residues MKFSDNNYQK*ILDSLADQKIFEPTPIQTKAIPLISKKENVIGIAPTGTGKTLAFALPILNNLDLSQKLQAIIIAPTREL VRQIFSKIALFKKQQPLLQIKMLIGGESIDKQINSQLNKAHIIVATPTRLKQVLSSQVLDLRSINTLVFDEADMLMDLGF VNELDFINSQFINTNVQKISFSATLHEMLSIQLKKYFKNTKIINISNSIYENEKITHYVVHNHDK*HSLSTIMKTIKPYL CIIFANTKKEVELIYKYLVEQNKNVCILHGSLLQRERKNNYRDIKNNKFQYVVASDIASRGLDIDGASHIIN*NLPSENE *YIHRAGRSGRGKYSGESYVLYDPKDHDKLLNLSKKGIVFHHKFIKQNELVDKQFVFKKKNQFHDLETQNEIKKVIATAS TKVKPGYKKKIKEAIQKINQKNKRSHIEKKMNAHRIRGYKLKNSQ
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI21071032, Length=350, Percent_Identity=32.2857142857143, Blast_Score=175, Evalue=9e-44, Organism=Homo sapiens, GI262118318, Length=335, Percent_Identity=30.7462686567164, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI216548263, Length=335, Percent_Identity=30.7462686567164, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI13518015, Length=335, Percent_Identity=30.7462686567164, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI262231852, Length=335, Percent_Identity=30.7462686567164, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI13129006, Length=355, Percent_Identity=31.5492957746479, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI148613856, Length=347, Percent_Identity=31.1239193083574, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI38201710, Length=347, Percent_Identity=31.1239193083574, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI301171467, Length=335, Percent_Identity=31.9402985074627, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI87196351, Length=335, Percent_Identity=31.9402985074627, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI301171475, Length=335, Percent_Identity=31.9402985074627, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI41327771, Length=353, Percent_Identity=31.4447592067989, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI169881239, Length=335, Percent_Identity=31.6417910447761, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI13514809, Length=335, Percent_Identity=31.6417910447761, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI41327773, Length=343, Percent_Identity=31.1953352769679, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI45446747, Length=335, Percent_Identity=31.9402985074627, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI45446743, Length=335, Percent_Identity=31.9402985074627, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI50659095, Length=355, Percent_Identity=30.7042253521127, Blast_Score=152, Evalue=4e-37, Organism=Homo sapiens, GI4758138, Length=356, Percent_Identity=29.7752808988764, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI51094101, Length=341, Percent_Identity=30.4985337243402, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI164419743, Length=341, Percent_Identity=30.4985337243402, Blast_Score=149, Evalue=3e-36, Organism=Homo sapiens, GI7661920, Length=316, Percent_Identity=32.5949367088608, Blast_Score=149, Evalue=7e-36, Organism=Homo sapiens, GI222352149, Length=344, Percent_Identity=29.9418604651163, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI20149629, Length=340, Percent_Identity=32.0588235294118, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI31542656, Length=346, Percent_Identity=32.0809248554913, Blast_Score=138, Evalue=8e-33, Organism=Homo sapiens, GI4503529, Length=337, Percent_Identity=29.080118694362, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI164664518, Length=326, Percent_Identity=29.4478527607362, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI13514831, Length=386, Percent_Identity=29.0155440414508, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI83700235, Length=337, Percent_Identity=29.080118694362, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI38569505, Length=364, Percent_Identity=28.5714285714286, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI38569503, Length=364, Percent_Identity=28.5714285714286, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI256223453, Length=335, Percent_Identity=28.3582089552239, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI224593278, Length=370, Percent_Identity=29.7297297297297, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI41327776, Length=337, Percent_Identity=29.9703264094956, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI188035877, Length=386, Percent_Identity=28.2383419689119, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI41327779, Length=367, Percent_Identity=30.2452316076294, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI55749865, Length=358, Percent_Identity=28.2122905027933, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI21040371, Length=349, Percent_Identity=24.9283667621776, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI256773275, Length=366, Percent_Identity=27.3224043715847, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI4758112, Length=353, Percent_Identity=25.4957507082153, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI18375623, Length=353, Percent_Identity=25.4957507082153, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI62241022, Length=342, Percent_Identity=25.7309941520468, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI6005743, Length=342, Percent_Identity=25.7309941520468, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI8922886, Length=342, Percent_Identity=25.4385964912281, Blast_Score=109, Evalue=6e-24, Organism=Homo sapiens, GI4826686, Length=335, Percent_Identity=27.4626865671642, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI38327634, Length=381, Percent_Identity=27.5590551181102, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI164419732, Length=329, Percent_Identity=24.9240121580547, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI62241024, Length=325, Percent_Identity=25.2307692307692, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI9966805, Length=314, Percent_Identity=27.0700636942675, Blast_Score=99, Evalue=9e-21, Organism=Homo sapiens, GI9506931, Length=377, Percent_Identity=24.9336870026525, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI154759257, Length=361, Percent_Identity=24.0997229916898, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI17505907, Length=178, Percent_Identity=32.0224719101124, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI20336298, Length=175, Percent_Identity=32.5714285714286, Blast_Score=79, Evalue=6e-15, Organism=Escherichia coli, GI87082221, Length=347, Percent_Identity=31.4121037463977, Blast_Score=181, Evalue=6e-47, Organism=Escherichia coli, GI1787605, Length=328, Percent_Identity=32.3170731707317, Blast_Score=170, Evalue=2e-43, Organism=Escherichia coli, GI1787016, Length=355, Percent_Identity=31.2676056338028, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1790214, Length=353, Percent_Identity=30.8781869688385, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1788930, Length=343, Percent_Identity=31.1953352769679, Blast_Score=147, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17507945, Length=352, Percent_Identity=32.9545454545455, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI32565321, Length=381, Percent_Identity=29.1338582677165, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI86570094, Length=342, Percent_Identity=32.4561403508772, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI71995718, Length=332, Percent_Identity=29.8192771084337, Blast_Score=151, Evalue=8e-37, Organism=Caenorhabditis elegans, GI71995724, Length=315, Percent_Identity=31.7460317460317, Blast_Score=149, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17507121, Length=315, Percent_Identity=31.1111111111111, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI115533224, Length=336, Percent_Identity=30.6547619047619, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17510307, Length=331, Percent_Identity=30.5135951661631, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17552642, Length=355, Percent_Identity=29.8591549295775, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71995514, Length=331, Percent_Identity=30.5135951661631, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17510309, Length=331, Percent_Identity=30.5135951661631, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71987143, Length=346, Percent_Identity=29.1907514450867, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17507641, Length=396, Percent_Identity=29.7979797979798, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17555296, Length=355, Percent_Identity=28.7323943661972, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI32564046, Length=384, Percent_Identity=30.46875, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17552114, Length=339, Percent_Identity=29.7935103244838, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17537549, Length=335, Percent_Identity=29.2537313432836, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI71999646, Length=330, Percent_Identity=28.7878787878788, Blast_Score=138, Evalue=7e-33, Organism=Caenorhabditis elegans, GI71999644, Length=330, Percent_Identity=28.7878787878788, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17509811, Length=355, Percent_Identity=28.4507042253521, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17508543, Length=368, Percent_Identity=27.445652173913, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI115532548, Length=360, Percent_Identity=31.1111111111111, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI115532546, Length=360, Percent_Identity=31.1111111111111, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17510559, Length=385, Percent_Identity=29.3506493506493, Blast_Score=132, Evalue=4e-31, Organism=Caenorhabditis elegans, GI193206561, Length=392, Percent_Identity=26.0204081632653, Blast_Score=132, Evalue=4e-31, Organism=Caenorhabditis elegans, GI17507877, Length=346, Percent_Identity=28.6127167630058, Blast_Score=131, Evalue=6e-31, Organism=Caenorhabditis elegans, GI17507879, Length=336, Percent_Identity=29.1666666666667, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI71990816, Length=369, Percent_Identity=28.7262872628726, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17507881, Length=343, Percent_Identity=28.2798833819242, Blast_Score=121, Evalue=8e-28, Organism=Caenorhabditis elegans, GI71982858, Length=352, Percent_Identity=25.8522727272727, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI25148203, Length=398, Percent_Identity=26.1306532663317, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17536099, Length=361, Percent_Identity=27.4238227146814, Blast_Score=108, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17536101, Length=361, Percent_Identity=27.4238227146814, Blast_Score=108, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17505370, Length=335, Percent_Identity=27.4626865671642, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17536103, Length=361, Percent_Identity=27.1468144044321, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17556951, Length=320, Percent_Identity=28.4375, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71997889, Length=469, Percent_Identity=24.3070362473348, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI25148291, Length=335, Percent_Identity=25.6716417910448, Blast_Score=95, Evalue=7e-20, Organism=Caenorhabditis elegans, GI193208216, Length=367, Percent_Identity=26.7029972752044, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI25148205, Length=330, Percent_Identity=25.4545454545455, Blast_Score=88, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17553716, Length=313, Percent_Identity=23.961661341853, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71982862, Length=197, Percent_Identity=27.9187817258883, Blast_Score=74, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321360, Length=336, Percent_Identity=32.7380952380952, Blast_Score=169, Evalue=8e-43, Organism=Saccharomyces cerevisiae, GI6325138, Length=345, Percent_Identity=30.1449275362319, Blast_Score=160, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6324778, Length=353, Percent_Identity=28.8951841359773, Blast_Score=157, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6320449, Length=356, Percent_Identity=32.3033707865169, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6321856, Length=360, Percent_Identity=33.6111111111111, Blast_Score=151, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6324217, Length=344, Percent_Identity=29.6511627906977, Blast_Score=151, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6320224, Length=346, Percent_Identity=32.3699421965318, Blast_Score=147, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6321963, Length=355, Percent_Identity=30.7042253521127, Blast_Score=144, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6320041, Length=324, Percent_Identity=30.5555555555556, Blast_Score=136, Evalue=7e-33, Organism=Saccharomyces cerevisiae, GI6319714, Length=353, Percent_Identity=29.1784702549575, Blast_Score=136, Evalue=8e-33, Organism=Saccharomyces cerevisiae, GI6321267, Length=334, Percent_Identity=29.3413173652695, Blast_Score=130, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6323021, Length=357, Percent_Identity=29.1316526610644, Blast_Score=129, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6322427, Length=357, Percent_Identity=26.6106442577031, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6323947, Length=365, Percent_Identity=27.3972602739726, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6324620, Length=338, Percent_Identity=28.698224852071, Blast_Score=125, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6319618, Length=410, Percent_Identity=30, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6320173, Length=281, Percent_Identity=29.1814946619217, Blast_Score=120, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6320400, Length=392, Percent_Identity=30.3571428571429, Blast_Score=119, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6321111, Length=343, Percent_Identity=28.2798833819242, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6320119, Length=344, Percent_Identity=27.6162790697674, Blast_Score=114, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6322912, Length=307, Percent_Identity=28.3387622149837, Blast_Score=110, Evalue=6e-25, Organism=Saccharomyces cerevisiae, GI6322323, Length=307, Percent_Identity=28.3387622149837, Blast_Score=110, Evalue=6e-25, Organism=Saccharomyces cerevisiae, GI6323306, Length=424, Percent_Identity=25, Blast_Score=94, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6321374, Length=426, Percent_Identity=24.8826291079812, Blast_Score=78, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6322876, Length=156, Percent_Identity=35.8974358974359, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24584399, Length=331, Percent_Identity=32.9305135951662, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI17985987, Length=348, Percent_Identity=32.4712643678161, Blast_Score=166, Evalue=3e-41, Organism=Drosophila melanogaster, GI17977678, Length=357, Percent_Identity=31.0924369747899, Blast_Score=164, Evalue=8e-41, Organism=Drosophila melanogaster, GI281361218, Length=334, Percent_Identity=32.6347305389222, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI24644481, Length=334, Percent_Identity=32.6347305389222, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI24644479, Length=334, Percent_Identity=32.6347305389222, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI24644483, Length=334, Percent_Identity=32.6347305389222, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI24644487, Length=334, Percent_Identity=32.6347305389222, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI45551833, Length=334, Percent_Identity=32.6347305389222, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI24644485, Length=334, Percent_Identity=32.6347305389222, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI24642151, Length=338, Percent_Identity=32.5443786982249, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI24584994, Length=352, Percent_Identity=31.5340909090909, Blast_Score=161, Evalue=7e-40, Organism=Drosophila melanogaster, GI28574962, Length=344, Percent_Identity=31.3953488372093, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI28575014, Length=338, Percent_Identity=30.4733727810651, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI21355075, Length=350, Percent_Identity=29.7142857142857, Blast_Score=151, Evalue=9e-37, Organism=Drosophila melanogaster, GI18857967, Length=353, Percent_Identity=29.7450424929178, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI24645031, Length=321, Percent_Identity=31.7757009345794, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI17136814, Length=440, Percent_Identity=29.0909090909091, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI24583281, Length=324, Percent_Identity=30.2469135802469, Blast_Score=145, Evalue=6e-35, Organism=Drosophila melanogaster, GI24583279, Length=324, Percent_Identity=30.2469135802469, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI24666101, Length=341, Percent_Identity=28.1524926686217, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI24662330, Length=334, Percent_Identity=30.8383233532934, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI21356161, Length=381, Percent_Identity=29.3963254593176, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24642822, Length=377, Percent_Identity=28.9124668435013, Blast_Score=135, Evalue=4e-32, Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=29.2063492063492, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24585582, Length=361, Percent_Identity=30.4709141274238, Blast_Score=129, Evalue=6e-30, Organism=Drosophila melanogaster, GI24582080, Length=327, Percent_Identity=27.82874617737, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI24582078, Length=327, Percent_Identity=27.82874617737, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI17136248, Length=327, Percent_Identity=27.82874617737, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI24582075, Length=327, Percent_Identity=27.82874617737, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI24668515, Length=323, Percent_Identity=28.7925696594427, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI21355559, Length=352, Percent_Identity=27.5568181818182, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI17647335, Length=337, Percent_Identity=27.893175074184, Blast_Score=118, Evalue=7e-27, Organism=Drosophila melanogaster, GI24581954, Length=357, Percent_Identity=25.7703081232493, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24581952, Length=357, Percent_Identity=25.7703081232493, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24581956, Length=357, Percent_Identity=25.7703081232493, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI19920478, Length=328, Percent_Identity=26.5243902439024, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI28571808, Length=355, Percent_Identity=27.887323943662, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI28571809, Length=355, Percent_Identity=27.887323943662, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI18859659, Length=428, Percent_Identity=25.7009345794392, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI28571338, Length=428, Percent_Identity=25.7009345794392, Blast_Score=104, Evalue=2e-22, Organism=Drosophila melanogaster, GI24643725, Length=372, Percent_Identity=27.1505376344086, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI20130173, Length=430, Percent_Identity=23.953488372093, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI17136666, Length=417, Percent_Identity=24.7002398081535, Blast_Score=86, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50653; Mature: 50653
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSDNNYQKILDSLADQKIFEPTPIQTKAIPLISKKENVIGIAPTGTGKTLAFALPILN CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEECEECCCCEEEEECCCCCCEEEEEEHHHC NLDLSQKLQAIIIAPTRELVRQIFSKIALFKKQQPLLQIKMLIGGESIDKQINSQLNKAH CCCHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHEEHHHHCCCHHHHHHHHCCCCEE IIVATPTRLKQVLSSQVLDLRSINTLVFDEADMLMDLGFVNELDFINSQFINTNVQKISF EEEECHHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHCCHHHHHHHHHHHHCCCHHEEEH SATLHEMLSIQLKKYFKNTKIINISNSIYENEKITHYVVHNHDKHSLSTIMKTIKPYLCI HHHHHHHHHHHHHHHHCCCEEEEECCCHHCCCCEEEEEEECCCHHHHHHHHHHHCCEEEE IFANTKKEVELIYKYLVEQNKNVCILHGSLLQRERKNNYRDIKNNKFQYVVASDIASRGL EEECCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHCCC DIDGASHIINNLPSENEYIHRAGRSGRGKYSGESYVLYDPKDHDKLLNLSKKGIVFHHKF CCCCHHHHHHCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCEEEHHHH IKQNELVDKQFVFKKKNQFHDLETQNEIKKVIATASTKVKPGYKKKIKEAIQKINQKNKR HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH SHIEKKMNAHRIRGYKLKNSQ HHHHHHHHHHHHCCEECCCCC >Mature Secondary Structure MKFSDNNYQKILDSLADQKIFEPTPIQTKAIPLISKKENVIGIAPTGTGKTLAFALPILN CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEECEECCCCEEEEECCCCCCEEEEEEHHHC NLDLSQKLQAIIIAPTRELVRQIFSKIALFKKQQPLLQIKMLIGGESIDKQINSQLNKAH CCCHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHEEHHHHCCCHHHHHHHHCCCCEE IIVATPTRLKQVLSSQVLDLRSINTLVFDEADMLMDLGFVNELDFINSQFINTNVQKISF EEEECHHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHCCHHHHHHHHHHHHCCCHHEEEH SATLHEMLSIQLKKYFKNTKIINISNSIYENEKITHYVVHNHDKHSLSTIMKTIKPYLCI HHHHHHHHHHHHHHHHCCCEEEEECCCHHCCCCEEEEEEECCCHHHHHHHHHHHCCEEEE IFANTKKEVELIYKYLVEQNKNVCILHGSLLQRERKNNYRDIKNNKFQYVVASDIASRGL EEECCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHCCC DIDGASHIINNLPSENEYIHRAGRSGRGKYSGESYVLYDPKDHDKLLNLSKKGIVFHHKF CCCCHHHHHHCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCEEEHHHH IKQNELVDKQFVFKKKNQFHDLETQNEIKKVIATASTKVKPGYKKKIKEAIQKINQKNKR HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH SHIEKKMNAHRIRGYKLKNSQ HHHHHHHHHHHHCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]