Definition Ureaplasma urealyticum serovar 10 str. ATCC 33699 chromosome, complete genome.
Accession NC_011374
Length 874,478

Click here to switch to the map view.

The map label for this gene is 209554100

Identifier: 209554100

GI number: 209554100

Start: 853896

End: 855461

Strand: Reverse

Name: 209554100

Synonym: UUR10_0688

Alternate gene names: NA

Gene position: 855461-853896 (Counterclockwise)

Preceding gene: 209554016

Following gene: 209554176

Centisome position: 97.83

GC content: 27.52

Gene sequence:

>1566_bases
TTGAGTTGTTTAATTAATAAAAAACAAAATAGTTTTTTTAAATTGAATTTTAGAAAAATATTTGGCGATAAAGAATTTGT
TAAGAAAGCACTTAAATTATTTTTTCCAGCAATTATACAAAACATTATCATAACTGTTGTTGCTTATGTTGATAACTTTT
TTTTAGCAACATACGCGCCCCAATCACAAGGATTAGATGCTAAAACAGCAACAATTCTTGCGACGCAATTATTATATTTA
CCTACAATTTTTACAGTGGCTGTTTGTTATGCGTGTAGTGTTTATAGTTCGCAGTATTTAGGAAGTAAAAATTATCATAA
GTTTAAAGAAACAATAAACTATATGATTTTAGGTTCAGTAGTATTAAATATCCCTTTTTTAATTGCTTATATTGGTTTTC
CACAATGATCAGTAACAACATACGCTGGATCAATTGGTAATTTTGGTAAAGACCTCTCAAAAATTACACCAGAGGAATTA
GCTAACTTTGAAAAAGTTAATAAATGAGCATCAATGTATTTACAATATGCGATGATTGGTCAATGTTTTTATGCTTTTTC
GTATCCATTTGCCATTGCTCATCGCCAGGATGCACGACCAACCATTCCTTTATTTGGAAGTATTGCAGCTCTTTGTTTAA
ATTGTATTTTAGATCCAGTTTTAATGATTTTAGTCGCTAAAACACCAGAAGAAGCAGTTATGTTAGCTGTGTTTTCAACA
ATTGCTTCACGTGGTTTTGATTTATCTATTGTTTTATTATGTGTGTTTATTTTTAAAAAACGTGCAACATATGTTGTTAA
TTATTGAAATTTAACATGACGATTGCTAAAAAACATTTTTAAACGTGGATGATTTATTGCTGTTAATGAAATTATATTTT
CACTTTCAACAATTCTATTATCATTGTTTTTATATAAATACCATCCTGATATTCGTGCTTCTGCTTCAACTGCTTTATTA
ATTTCACAATTTACGAAATTAATTTGACCAGGAATGAATACTATTGTAGCTGTTCTTGTACTTTCACATTTAGGAAGAAA
TGAAATTAGTGCTGCAAAACAAAACTCACGTTATACAATTGCTTGATCTCTTGTTATTGCATGCATTTTAGCGATTATAT
TATTTATATTATCATTCTTTATTAACCCTTTATTGAATCCGCCATTATCAAATTCACTAGTTGATATTGAACATGCTAAA
AAAGTAGCAAAATTAGCAACTCAATTAGAATGAGTTTTAGTTGCTGAAATTATTATTTTAGGCCCATATGCAGCAATGAA
TAATTGTATTCGTGGTGCTGGAGTTATTTATGGATCAATTAATGATAGTTCAGTCATGATTACATGAGTAGTAATGTTTG
CTTTAATTAGTACATTTGCATATCATCCTAAAATTCCTCATGTTCTAACATTTGCTTTACTTGAATCTAATTGATTAGTA
AAAATGATTCTTGTAAGTATCTTATTTTCAAAAGTTAATTGAGCTAAAAATTTAATTAACACTAATCAATTAAAAACAAT
AAATAATATGCAAACATTTGCATTTAATTACAATAAAAATAAATAA

Upstream 100 bases:

>100_bases
TTACTTTAAAAAGTATATAAAAGTCCTATTGTTCCAAAAATTACACTATAATAATTATTGTGCTTTTTATTATGTTTAAA
TGAAAGTGGTGATTTTTTTC

Downstream 100 bases:

>100_bases
AATATTTAAAAATGAAAACAAATTAATAATACATGTGTAATAAAAGGAACATTTTTATCTTTTTTTGAAAAAATGAGGCC
AATTTTTGCTATCATTTCTA

Product: DNA damage inducible protein - mate transporter family

Products: NA

Alternate protein names: MATE Transporter Family DNA Damage Inducible Protein; Multi Anti Extrusion Family Protein

Number of amino acids: Translated: 521; Mature: 520

Protein sequence:

>521_residues
MSCLINKKQNSFFKLNFRKIFGDKEFVKKALKLFFPAIIQNIIITVVAYVDNFFLATYAPQSQGLDAKTATILATQLLYL
PTIFTVAVCYACSVYSSQYLGSKNYHKFKETINYMILGSVVLNIPFLIAYIGFPQWSVTTYAGSIGNFGKDLSKITPEEL
ANFEKVNKWASMYLQYAMIGQCFYAFSYPFAIAHRQDARPTIPLFGSIAALCLNCILDPVLMILVAKTPEEAVMLAVFST
IASRGFDLSIVLLCVFIFKKRATYVVNYWNLTWRLLKNIFKRGWFIAVNEIIFSLSTILLSLFLYKYHPDIRASASTALL
ISQFTKLIWPGMNTIVAVLVLSHLGRNEISAAKQNSRYTIAWSLVIACILAIILFILSFFINPLLNPPLSNSLVDIEHAK
KVAKLATQLEWVLVAEIIILGPYAAMNNCIRGAGVIYGSINDSSVMITWVVMFALISTFAYHPKIPHVLTFALLESNWLV
KMILVSILFSKVNWAKNLINTNQLKTINNMQTFAFNYNKNK

Sequences:

>Translated_521_residues
MSCLINKKQNSFFKLNFRKIFGDKEFVKKALKLFFPAIIQNIIITVVAYVDNFFLATYAPQSQGLDAKTATILATQLLYL
PTIFTVAVCYACSVYSSQYLGSKNYHKFKETINYMILGSVVLNIPFLIAYIGFPQ*SVTTYAGSIGNFGKDLSKITPEEL
ANFEKVNK*ASMYLQYAMIGQCFYAFSYPFAIAHRQDARPTIPLFGSIAALCLNCILDPVLMILVAKTPEEAVMLAVFST
IASRGFDLSIVLLCVFIFKKRATYVVNY*NLT*RLLKNIFKRG*FIAVNEIIFSLSTILLSLFLYKYHPDIRASASTALL
ISQFTKLI*PGMNTIVAVLVLSHLGRNEISAAKQNSRYTIA*SLVIACILAIILFILSFFINPLLNPPLSNSLVDIEHAK
KVAKLATQLE*VLVAEIIILGPYAAMNNCIRGAGVIYGSINDSSVMIT*VVMFALISTFAYHPKIPHVLTFALLESN*LV
KMILVSILFSKVN*AKNLINTNQLKTINNMQTFAFNYNKNK
>Mature_520_residues
SCLINKKQNSFFKLNFRKIFGDKEFVKKALKLFFPAIIQNIIITVVAYVDNFFLATYAPQSQGLDAKTATILATQLLYLP
TIFTVAVCYACSVYSSQYLGSKNYHKFKETINYMILGSVVLNIPFLIAYIGFPQ*SVTTYAGSIGNFGKDLSKITPEELA
NFEKVNK*ASMYLQYAMIGQCFYAFSYPFAIAHRQDARPTIPLFGSIAALCLNCILDPVLMILVAKTPEEAVMLAVFSTI
ASRGFDLSIVLLCVFIFKKRATYVVNY*NLT*RLLKNIFKRG*FIAVNEIIFSLSTILLSLFLYKYHPDIRASASTALLI
SQFTKLI*PGMNTIVAVLVLSHLGRNEISAAKQNSRYTIA*SLVIACILAIILFILSFFINPLLNPPLSNSLVDIEHAKK
VAKLATQLE*VLVAEIIILGPYAAMNNCIRGAGVIYGSINDSSVMIT*VVMFALISTFAYHPKIPHVLTFALLESN*LVK
MILVSILFSKVN*AKNLINTNQLKTINNMQTFAFNYNKNK

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56561; Mature: 56430

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCLINKKQNSFFKLNFRKIFGDKEFVKKALKLFFPAIIQNIIITVVAYVDNFFLATYAP
CCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
QSQGLDAKTATILATQLLYLPTIFTVAVCYACSVYSSQYLGSKNYHKFKETINYMILGSV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VLNIPFLIAYIGFPQSVTTYAGSIGNFGKDLSKITPEELANFEKVNKASMYLQYAMIGQC
HHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FYAFSYPFAIAHRQDARPTIPLFGSIAALCLNCILDPVLMILVAKTPEEAVMLAVFSTIA
HHHHCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SRGFDLSIVLLCVFIFKKRATYVVNYNLTRLLKNIFKRGFIAVNEIIFSLSTILLSLFLY
HCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYHPDIRASASTALLISQFTKLIPGMNTIVAVLVLSHLGRNEISAAKQNSRYTIASLVIA
HHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHH
CILAIILFILSFFINPLLNPPLSNSLVDIEHAKKVAKLATQLEVLVAEIIILGPYAAMNN
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
CIRGAGVIYGSINDSSVMITVVMFALISTFAYHPKIPHVLTFALLESNLVKMILVSILFS
HHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KVNAKNLINTNQLKTINNMQTFAFNYNKNK
HHCHHHCCCCHHHHHHCCCEEEEEECCCCC
>Mature Secondary Structure 
SCLINKKQNSFFKLNFRKIFGDKEFVKKALKLFFPAIIQNIIITVVAYVDNFFLATYAP
CCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
QSQGLDAKTATILATQLLYLPTIFTVAVCYACSVYSSQYLGSKNYHKFKETINYMILGSV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VLNIPFLIAYIGFPQSVTTYAGSIGNFGKDLSKITPEELANFEKVNKASMYLQYAMIGQC
HHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FYAFSYPFAIAHRQDARPTIPLFGSIAALCLNCILDPVLMILVAKTPEEAVMLAVFSTIA
HHHHCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SRGFDLSIVLLCVFIFKKRATYVVNYNLTRLLKNIFKRGFIAVNEIIFSLSTILLSLFLY
HCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYHPDIRASASTALLISQFTKLIPGMNTIVAVLVLSHLGRNEISAAKQNSRYTIASLVIA
HHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHH
CILAIILFILSFFINPLLNPPLSNSLVDIEHAKKVAKLATQLEVLVAEIIILGPYAAMNN
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
CIRGAGVIYGSINDSSVMITVVMFALISTFAYHPKIPHVLTFALLESNLVKMILVSILFS
HHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KVNAKNLINTNQLKTINNMQTFAFNYNKNK
HHCHHHCCCCHHHHHHCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA