| Definition | Ureaplasma urealyticum serovar 10 str. ATCC 33699 chromosome, complete genome. |
|---|---|
| Accession | NC_011374 |
| Length | 874,478 |
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The map label for this gene is 209554100
Identifier: 209554100
GI number: 209554100
Start: 853896
End: 855461
Strand: Reverse
Name: 209554100
Synonym: UUR10_0688
Alternate gene names: NA
Gene position: 855461-853896 (Counterclockwise)
Preceding gene: 209554016
Following gene: 209554176
Centisome position: 97.83
GC content: 27.52
Gene sequence:
>1566_bases TTGAGTTGTTTAATTAATAAAAAACAAAATAGTTTTTTTAAATTGAATTTTAGAAAAATATTTGGCGATAAAGAATTTGT TAAGAAAGCACTTAAATTATTTTTTCCAGCAATTATACAAAACATTATCATAACTGTTGTTGCTTATGTTGATAACTTTT TTTTAGCAACATACGCGCCCCAATCACAAGGATTAGATGCTAAAACAGCAACAATTCTTGCGACGCAATTATTATATTTA CCTACAATTTTTACAGTGGCTGTTTGTTATGCGTGTAGTGTTTATAGTTCGCAGTATTTAGGAAGTAAAAATTATCATAA GTTTAAAGAAACAATAAACTATATGATTTTAGGTTCAGTAGTATTAAATATCCCTTTTTTAATTGCTTATATTGGTTTTC CACAATGATCAGTAACAACATACGCTGGATCAATTGGTAATTTTGGTAAAGACCTCTCAAAAATTACACCAGAGGAATTA GCTAACTTTGAAAAAGTTAATAAATGAGCATCAATGTATTTACAATATGCGATGATTGGTCAATGTTTTTATGCTTTTTC GTATCCATTTGCCATTGCTCATCGCCAGGATGCACGACCAACCATTCCTTTATTTGGAAGTATTGCAGCTCTTTGTTTAA ATTGTATTTTAGATCCAGTTTTAATGATTTTAGTCGCTAAAACACCAGAAGAAGCAGTTATGTTAGCTGTGTTTTCAACA ATTGCTTCACGTGGTTTTGATTTATCTATTGTTTTATTATGTGTGTTTATTTTTAAAAAACGTGCAACATATGTTGTTAA TTATTGAAATTTAACATGACGATTGCTAAAAAACATTTTTAAACGTGGATGATTTATTGCTGTTAATGAAATTATATTTT CACTTTCAACAATTCTATTATCATTGTTTTTATATAAATACCATCCTGATATTCGTGCTTCTGCTTCAACTGCTTTATTA ATTTCACAATTTACGAAATTAATTTGACCAGGAATGAATACTATTGTAGCTGTTCTTGTACTTTCACATTTAGGAAGAAA TGAAATTAGTGCTGCAAAACAAAACTCACGTTATACAATTGCTTGATCTCTTGTTATTGCATGCATTTTAGCGATTATAT TATTTATATTATCATTCTTTATTAACCCTTTATTGAATCCGCCATTATCAAATTCACTAGTTGATATTGAACATGCTAAA AAAGTAGCAAAATTAGCAACTCAATTAGAATGAGTTTTAGTTGCTGAAATTATTATTTTAGGCCCATATGCAGCAATGAA TAATTGTATTCGTGGTGCTGGAGTTATTTATGGATCAATTAATGATAGTTCAGTCATGATTACATGAGTAGTAATGTTTG CTTTAATTAGTACATTTGCATATCATCCTAAAATTCCTCATGTTCTAACATTTGCTTTACTTGAATCTAATTGATTAGTA AAAATGATTCTTGTAAGTATCTTATTTTCAAAAGTTAATTGAGCTAAAAATTTAATTAACACTAATCAATTAAAAACAAT AAATAATATGCAAACATTTGCATTTAATTACAATAAAAATAAATAA
Upstream 100 bases:
>100_bases TTACTTTAAAAAGTATATAAAAGTCCTATTGTTCCAAAAATTACACTATAATAATTATTGTGCTTTTTATTATGTTTAAA TGAAAGTGGTGATTTTTTTC
Downstream 100 bases:
>100_bases AATATTTAAAAATGAAAACAAATTAATAATACATGTGTAATAAAAGGAACATTTTTATCTTTTTTTGAAAAAATGAGGCC AATTTTTGCTATCATTTCTA
Product: DNA damage inducible protein - mate transporter family
Products: NA
Alternate protein names: MATE Transporter Family DNA Damage Inducible Protein; Multi Anti Extrusion Family Protein
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MSCLINKKQNSFFKLNFRKIFGDKEFVKKALKLFFPAIIQNIIITVVAYVDNFFLATYAPQSQGLDAKTATILATQLLYL PTIFTVAVCYACSVYSSQYLGSKNYHKFKETINYMILGSVVLNIPFLIAYIGFPQWSVTTYAGSIGNFGKDLSKITPEEL ANFEKVNKWASMYLQYAMIGQCFYAFSYPFAIAHRQDARPTIPLFGSIAALCLNCILDPVLMILVAKTPEEAVMLAVFST IASRGFDLSIVLLCVFIFKKRATYVVNYWNLTWRLLKNIFKRGWFIAVNEIIFSLSTILLSLFLYKYHPDIRASASTALL ISQFTKLIWPGMNTIVAVLVLSHLGRNEISAAKQNSRYTIAWSLVIACILAIILFILSFFINPLLNPPLSNSLVDIEHAK KVAKLATQLEWVLVAEIIILGPYAAMNNCIRGAGVIYGSINDSSVMITWVVMFALISTFAYHPKIPHVLTFALLESNWLV KMILVSILFSKVNWAKNLINTNQLKTINNMQTFAFNYNKNK
Sequences:
>Translated_521_residues MSCLINKKQNSFFKLNFRKIFGDKEFVKKALKLFFPAIIQNIIITVVAYVDNFFLATYAPQSQGLDAKTATILATQLLYL PTIFTVAVCYACSVYSSQYLGSKNYHKFKETINYMILGSVVLNIPFLIAYIGFPQ*SVTTYAGSIGNFGKDLSKITPEEL ANFEKVNK*ASMYLQYAMIGQCFYAFSYPFAIAHRQDARPTIPLFGSIAALCLNCILDPVLMILVAKTPEEAVMLAVFST IASRGFDLSIVLLCVFIFKKRATYVVNY*NLT*RLLKNIFKRG*FIAVNEIIFSLSTILLSLFLYKYHPDIRASASTALL ISQFTKLI*PGMNTIVAVLVLSHLGRNEISAAKQNSRYTIA*SLVIACILAIILFILSFFINPLLNPPLSNSLVDIEHAK KVAKLATQLE*VLVAEIIILGPYAAMNNCIRGAGVIYGSINDSSVMIT*VVMFALISTFAYHPKIPHVLTFALLESN*LV KMILVSILFSKVN*AKNLINTNQLKTINNMQTFAFNYNKNK >Mature_520_residues SCLINKKQNSFFKLNFRKIFGDKEFVKKALKLFFPAIIQNIIITVVAYVDNFFLATYAPQSQGLDAKTATILATQLLYLP TIFTVAVCYACSVYSSQYLGSKNYHKFKETINYMILGSVVLNIPFLIAYIGFPQ*SVTTYAGSIGNFGKDLSKITPEELA NFEKVNK*ASMYLQYAMIGQCFYAFSYPFAIAHRQDARPTIPLFGSIAALCLNCILDPVLMILVAKTPEEAVMLAVFSTI ASRGFDLSIVLLCVFIFKKRATYVVNY*NLT*RLLKNIFKRG*FIAVNEIIFSLSTILLSLFLYKYHPDIRASASTALLI SQFTKLI*PGMNTIVAVLVLSHLGRNEISAAKQNSRYTIA*SLVIACILAIILFILSFFINPLLNPPLSNSLVDIEHAKK VAKLATQLE*VLVAEIIILGPYAAMNNCIRGAGVIYGSINDSSVMIT*VVMFALISTFAYHPKIPHVLTFALLESN*LVK MILVSILFSKVN*AKNLINTNQLKTINNMQTFAFNYNKNK
Specific function: Unknown
COG id: COG0534
COG function: function code V; Na+-driven multidrug efflux pump
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56561; Mature: 56430
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCLINKKQNSFFKLNFRKIFGDKEFVKKALKLFFPAIIQNIIITVVAYVDNFFLATYAP CCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC QSQGLDAKTATILATQLLYLPTIFTVAVCYACSVYSSQYLGSKNYHKFKETINYMILGSV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VLNIPFLIAYIGFPQSVTTYAGSIGNFGKDLSKITPEELANFEKVNKASMYLQYAMIGQC HHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH FYAFSYPFAIAHRQDARPTIPLFGSIAALCLNCILDPVLMILVAKTPEEAVMLAVFSTIA HHHHCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SRGFDLSIVLLCVFIFKKRATYVVNYNLTRLLKNIFKRGFIAVNEIIFSLSTILLSLFLY HCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYHPDIRASASTALLISQFTKLIPGMNTIVAVLVLSHLGRNEISAAKQNSRYTIASLVIA HHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHH CILAIILFILSFFINPLLNPPLSNSLVDIEHAKKVAKLATQLEVLVAEIIILGPYAAMNN HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH CIRGAGVIYGSINDSSVMITVVMFALISTFAYHPKIPHVLTFALLESNLVKMILVSILFS HHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KVNAKNLINTNQLKTINNMQTFAFNYNKNK HHCHHHCCCCHHHHHHCCCEEEEEECCCCC >Mature Secondary Structure SCLINKKQNSFFKLNFRKIFGDKEFVKKALKLFFPAIIQNIIITVVAYVDNFFLATYAP CCCCCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC QSQGLDAKTATILATQLLYLPTIFTVAVCYACSVYSSQYLGSKNYHKFKETINYMILGSV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VLNIPFLIAYIGFPQSVTTYAGSIGNFGKDLSKITPEELANFEKVNKASMYLQYAMIGQC HHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH FYAFSYPFAIAHRQDARPTIPLFGSIAALCLNCILDPVLMILVAKTPEEAVMLAVFSTIA HHHHCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SRGFDLSIVLLCVFIFKKRATYVVNYNLTRLLKNIFKRGFIAVNEIIFSLSTILLSLFLY HCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KYHPDIRASASTALLISQFTKLIPGMNTIVAVLVLSHLGRNEISAAKQNSRYTIASLVIA HHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHH CILAIILFILSFFINPLLNPPLSNSLVDIEHAKKVAKLATQLEVLVAEIIILGPYAAMNN HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH CIRGAGVIYGSINDSSVMITVVMFALISTFAYHPKIPHVLTFALLESNLVKMILVSILFS HHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KVNAKNLINTNQLKTINNMQTFAFNYNKNK HHCHHHCCCCHHHHHHCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA